XLOC_043958 (gene) - C. hemisphaerica

Overview
NameXLOC_043958
Unique NameXLOC_043958
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_57:61515..64912-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043958 ID=XLOC_043958|Name=XLOC_043958|organism=Clytia hemisphaerica|type=gene|length=3398bp|location=Sequence derived from alignment at scaffold_57:61515..64912- (Clytia hemisphaerica)
ACGCGGGTGACGTCTAGAATAGGCTACAAAGCAGACAATGAAAAAGAACC
CCCGTCAAAAGGTTGGGATCGGACAAGACACAAAGGAAGAACAAGTTATA
CAATAGTATATTGTTAACTTACAATACCTAGACAATAATATACTAATCAT
TGAGCACCTAAAAACTAAGAATAAAATTTGAAATAAACATACATTAATAA
ATCATAGTAAGACAAAATGGAAAGAATAAACACGACGGGTCTAATAATAA
AAAGTTCTAAAATGTGTTAATAAAGTCATTACCATTCATTTCGTAGAGGG
TAGTGTTGATAAATATATCTTGTAAAACATTACCACAAACATGACACTTT
ACAGTGGACTTCTTTAATGTAGTACGTAGCACGTTATTACAGGGTGTGTA
TGGCGGCCATTAGCACTACATGAAGAGCTATTTGTATTGAAAGTTCTGAA
ACAACAACTTATTTACAAATTACTTTTACCTGGGCTTTAATATTCATTAT
TCATCCAATAATTTTATCCCAATTATTATCGATTGTCGAATATTCTTCAT
CTTCATCTGACTCTTCATCAGATCCATCCATCCATTCCTCATCCTCGTCT
TGGCCCTGAACCACAACTTCCTCCTGATACTCTGGTTGCTCTTCAATCTC
TTCAGGCTCCTCATGACTCTTCTGGTGTTTGTCGAATTCTCTTTTCCTGG
CGAACTGAGCACCACATTCTGAGCACTGATACGGGATAATGCCTTGGTGA
ACTCCTTCAATGTGTCGCTTAAGATCATTTTTCTGAGAATAACTCTTACC
ACACTCATGACACTTGAACGGCTCTAACCCTCTATGATTCCTTTGAACGT
GTGCTAAAAGACGGTGCCGATGTGCAAATGATCTGTCACATTCGTCACAT
TTATGAGGACGTAAATCTCTAGGGGCAGTTTTCTTGTACACTGTTTTTGG
GACTGGTGGTTTCTTTGGTGTACCTTCATGCTTCTTGACTTTGACATGTT
TATAAAGCTCCCATTTTCTACCAAACCGTTCATCACACCAATCACATTCA
TAAGGTTTAGCACCTTTGTGAACGACATCAATGTGTCTGGTAAGGTCTCC
TTTTGCTGAATAAGCTCTACCACATTCATGACATTGAAATGGAATCAGAT
CTTTATGGACGATATCTATATGAGCTTGAAGTCGATTCTTCGCCCCAAAG
GTCTTTCCACACTCTGTGCATTTAAACTTTCTTTCTTCATCATGAATTTG
TTTGTGGCTATTAAGACCAGCTCTCCGTGAAAATGACTTACCACAAACAT
TACATTGAAATGGCTTAAGACCAAGATGTACAGCATTCTGATGCATTGTT
AGCCTGTAATTATTGATGAAGACTTTACCACAAACTTCACACTCTTTTCC
ACCAATCCCATTAACTTGTGAAACCTTGGTCCTTTCTTCGAAGGGCTTAA
ATAGGAAATCATTTTGTTGTGTGTCTCCAAGTTGAACTCGGTTGAGAAGA
TTACCAATAGCAAGTTGACAAGTACCCATTTTCTTGCCATCCTTGATTAT
TTCAAATGATAATTTGAATGGTATAATTGACGATTCAACCCCTGAATCAA
CATCTTTGATAATCAAGTTTTCAAGTTGGAAATTCATATTTGATTATTTC
TTTATTTTGATTTTATTATTATCTCTGAAGAAAAAAAAGAAAAAAATTAG
TGCATGCAGTATTATCCAGAAAACGCAAACCGCATTAAATCAACCGTGCT
TCCTGAGGAAATTGTATTTTCTCGAACAAAGGAAAAATCAAATTATGCAA
TTGTTTCATTTGCTTATACAAAATACGCGTTTGGTCTATTTTCGTTGCAA
AATTCTTTGTAGAATTCTATTTGCCTATAGCCCTACTAGTTCTTCCAATA
TCTCGTGTTCTTGTGCAAACAAAGCTAGGAGAAGAATTGTTTCACTGAAG
CTGACCGTTATAATATTTTCAAAGGTGAAAATGATTTACCACAAACATTA
CATTGAAAAGGCTTGAGACCAACAGCATTCTGATGCATAGCTGAAGGGAA
AAACAAATCAAAAGAGCAGCACAAATGAAAAGAAATTGATACTAAAGAAT
AAAGGCTTTACCAATTCAGTCGTTGCCCAGTTTTGTTAGATTAGATTAGC
CNCTAAAGAATAAAGGCTTTACCAATTCAGTCGTTGCCCAGTTTTGTTAG
ATTAGCTTAGTTAATTATTGTGATTGCTTTGAAACCTTTGACCAGTCAAA
TGGTTTAGCTATTAAATGACCAAATAGACTCATCTAACCGAAAGTAGAAC
AATATGTTTCTGAATTGGAAAAGCCTAATTTCTATTCAAGGAATTGATCT
CCATTTTTATCAATCGTTGAACATTCTCTATCCGAACTTTCCAACTAGTT
GGAGCTACTAATTTGTTCCATATTTAAGGATTCTTCGATTTGCTCCTGAG
TATTGGGTTGATGTTCTTCTTCATGACTTCTCCGATGTTTATCTAACTCA
ATTTTCCTAACGAAATAAGCACCGCATACGTTGCAATCAAATTTTGTAGT
CGAGTTTGAAGTAGATGAATCTTTGAGGACGGAAGATTGTGAATGAGTAG
CTGGCCTTTTCTCTTGATGATTTTTAATATGTTTATTGATTTCCCATTTT
GTACCAAAACGTTCCCCACATTCTTCACACTCATGTACTTTAACACCTTT
ATGAACAACATTAACATGTCTATTCAGATCGTATTTTGTGGAATATGCTC
TACCACATTCTTGGCATTGAAATGGGATGAGGTCTTTATGGACGATATCT
ATGTGTGATTGAAGTCGAATTCTAGCTACAAAAGATTTCCCACATTCATT
GCATTTATGCCTCTTATCCTTCTGGTGAGTCTGTTTATGTCCTTTAAGAA
GATCGTTATCAGCAAAAGCTTTACCACAAACATTACATTTGAAAGGTTTT
ATACCAAGATGGACCGCATTCTTGTGCTTTCTTACCTTGTGACTATCCCA
AAATGTTTTACCGCAAATATCACACTCCGGTTTTCCTTTTCCGCCTTTTT
TTCTTTCTACATAAGGCTTAAAAACGAAATCATTTTTATGTACATCTTCA
AGTTGTACCTGATTGAGTAAATTTACAATTGATAGCTGACATGATCCCAT
TTTCTTGCCATCTCTGGTAATCTCAAATGATAATTTGAAAGGTATAATTG
ATGACTCAAGCCCTAAATCGACGTCTTTGATAATCAAATTTTCAAGTTGG
AAATTCATTATTGATCTTTTTTTCTCTGTATTTTGATACTTTTGAATAAT
TTTCTCTAAAAAGAAATAAATGAGAATTAAAAACAGTTCCTTGAATTATT
TTAGTTCATTATTATAAAAACAAACTGAAAATTAAAAACTTAACGAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070655TCONS_00070655Clytia hemisphaericatranscript
TCONS_00070654TCONS_00070654Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_57supercontigscaffold_57:61515..64912 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
36.71	34.55	34.68	28.75	51.35	39.47	35.18	36.73	25.11	18.9	19.49	16.86	12.48	10.75	15.02	14.74	27.96	23	9.55	8.44	17.08	16.94	46.38	40.66	23.65	25.36	9.75	8.94	26.91	29.17