XLOC_043865 (gene) - C. hemisphaerica

Overview
NameXLOC_043865
Unique NameXLOC_043865
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_56:131577..135071+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043865 ID=XLOC_043865|Name=XLOC_043865|organism=Clytia hemisphaerica|type=gene|length=3495bp|location=Sequence derived from alignment at scaffold_56:131577..135071+ (Clytia hemisphaerica)
CCTGTTTGATGGACTATTGCACCACATCTTCCATACTCCGTTTCCAAGAT CATCTCTTGCTGGTTAAGCACTGAAAATTGGCAACTCGTGTCGCTTAAGG TGATATTCTTAGTATGCTGTCTCAAACTGTTCTCATCATTTTGTGTTCTT AATATTATTCTCATCATTCCATTATCGCAGCTTAATGTTTTGAGTTCTAA GCGTTCGTTTTTAATGGCGGTTTCTTCAGTACTGCTTACTGTGTTTTGGG CTTTagtgaaattttcagatttagGCTGTATTGTTGGTAGGTTTGGAGGT GTGaagtatttttcttctttttcgccTCGTGTGATATTTTTGAATAGAGG TGTCTCAGGTCTTTCAGACTTGGGCCCGCCGGTTGTTGCTAGGTTGAAGA TTGTCAATACATTGCCTTCCGTTGTAGCTTTAGTAACGTTCAGAAAGACT TTGGTACTTGACTTCTGAGTTTTTGTGGCAACTGTGGTGTTGGGATTCAA TGTAATGGTTTTATTGTCGAACACGAGGGAATGGTTGGTAGGGGAATATA TGGATTGTACGGGTGTGACACTCACTGTTGAATTAATTTTATCATTTGGA TGAATATCATTGTCAGATGAGGTTTTATTAACATTGATGATCACTGTAGG TCTTGGAGTAATTGGTCCTTTAGTATCTCTCGCTGCATTCGAGCTTTCCG AGTCATTGTTTTTAAGAATAATGTTGAAATTATTTCTAGCCTCTGACGTC GGTTTAAAAGTGTCATTCTGCATCTTATTCATACTCGAGGTGAAGTTTCC GGCGTATTTAGAGGTTGACAAAGTCTCAGTGGTGCGCAACCCGACAGATG TATCACTTGTGGAGGCTGGTAATGAAGTATTTTCAACGTTCACCACTGGA CTTGATAATGGCGACGTAGTGCGTTCTGATAGTGGTTCTTGGGTAGCTGA AACCTTTTGTGAGCTGGTTGTTTCAGTTGCAGGTCTCGTCTCAGTTGTTT CGTATTCAGGCTCAGTGATGTAGAAGCTTTTTGAGGATGGTTTGGATGTT GTAGTAATCGGATCTGGTGATTCTAATGTTGCATTGTTGAGCAAGTCAGT TTCATTACTTAATCCAACAGACGGTGTCGAAGTTGGACGCTTGGTCGTTG ACTCCTCTTGGCGTTTTGTCTCGAATGTTGCAGGTTCCAACGTGGAAGTT GTAGGCTTTTCAGTGTCTTTTTGTTCGAATTCATCCGATGGTGTAGTGAC TATGTTAGTTGGTTTGGTTGAGGTGTTTAATGTTACCAATGTTGAGTTTT TCGTGTCTATGTCTTGAGATTGCGTTGTTGTACTGACTTCATCTGAGGTA ATTAGAATTTGAGTTGGATTGTTTCGAGTATTAGAAGTTGACAATGGTTC AGAAGTTGAGGTAGATTCGTTTCTTTTATTAGTTGGTAATTCGGTGGCTT TATCAGCTTCTTCAGTCGGAACACCTTCATTGTCTTCAGTTGTTGAGTAT TGAGGTGGCGGAGATGGTTCTGTCTCCGTGTCGTGGGTTGTGCAGTCGTC GAGGTTTGATGCTGTGCTTGTTGTGTCTTTAGTAGATGTCGCAGGAGGTG TTATTTCTCTTGTGATCGTTGACTTTGTTGACGTTGAAGATGTAGCCAAA ATTGTAGTGGTCGTCGTAGAGTCTTCTATAGATGTGGAGAGGATTGAGTT TCCTCCTACGATTGGTAATTCAGTTGTAGATGACAAGGTGGCAGTAGATT TGTCTTCCGGAGATATTATTTCCGACGGCTTAGTTGGTAAAACGGTCGTT GATTCTGTGGTAGAAGACAGAGCAGATTTCGCGATATCAGTAGTTGTCGT AGGATCTGTTATAGGTGTGGGGGATTCTTCTTCGGTTATTGACGATATTG TTGTATCAACTACTCCTTTCGGAGATGTGGTATTTGGAGATTCAGTTACC ATTGCTGTCCGCGTAGTCAATGCAGAATCGCCATTGGATTCAACTTCTAT CGCTGTTGTTTTAGTAGATGTGATTGTAGTTGATTTCTGTGTAGTTGATT CATATTTCTTACTCGTGGATGAGATCGTATCAGTTGGAAGTTCCGTTGGA ATAAAAGTCGTAGTTTCTACCAAGGCTTCTGTTTTTTCATCTACAGGTGT AGTTGTTGATTGTACAGAGAAGACATTGTTGCCAGTTTTCGAAGAGGTTG TATAATCTTCTTTTGTCAAAACATTTGACAATAAATCTACTGTTGATATT GTCGGTAAATTCAAAGAAGATTTCGCAGACGTTGCATCTTTTACTCGAAG TGTGGGTGTGGTATTGTCTGTCTTAGGTGAAATAGTAGAAGAAGCTACTA AAGCCTGCGATGAATTCtccattgttgtttttcttacgGACTTTGACGGT GATTTATTTTTCACGAGTAATTTGGTAACTAAAGGTTTCGTCGTAACTTT GTTAGTATTTGGTGTTGTTTCTGGTGACCCTTCTGTTGAGGTTTGTCGAG GTATTTCTGCAGATGTCTTTCTGGTTGTTCTACCTTGTTTCGTAGATGGC TTTGTAGATTGGCTTGGTGATCTGCTAGTCATTATTGATCGGTAAAGGTC CGTAGAGGTTTCTACTGATACCATCGCAGTTGGAAATTTGGCATCTTGTG TAGTTTCTCTTTTGAGAATAGCAGGTAAGTTGGTGGTCATTGTTACTATG GTTGCTTTAGTCTTTTGAACTGTAGCAGGTGTTGGTGTCGTTTCTGTTGT CAGTGTGTTGCCTGCTTCTCTTGAAGTAATCTTGACAACAACTGGAGATG GTGTTGTAACTGTTGTGGATGTTGAAGGTGAAGGTGatgttgtggctgat tgtgaggctgttgttgttgttgctgctaGAGTTTCTTTTGTCGACTTTGA TGTTGTTGATGTCAAAGCAGATGTCGTGAATACAGGCTTTAGAGTTGAAA TTATATTGCTTGGCATGGTAGTTTTTGTAGTAGCTATAGTGACTGTTGTC GATGCTTTCGAAGATGTCGTTACTTCAGGTGCCATCGTATTAATCAATGC TCGTGTCTTTTCTATCAGAGTCGTCGATGGTGAAGGCAACGCCATTGTTG GTGTACGTGATGTTGTTGTCGGCCTGGTAGATGTTGTCAATAAAGGTGTT GTCTTCGTTAATGTCGTTGTGGTTGTTGTCGTCGTCGCTGTTGATGTTGT TGTTGGATTCGTTGATGTAGAGGTTGAAGTAGTAGTTGTAGTAGTCTTTG GCGAGGTTATTGTCNGTCGTGACGGTTGTTGCCGTAGGTTGAAGTAGTTG CAGTTATCTTTGGCGaggtttttgttgattttactAGAGTTTTGAACGGG GTTGATGTCgttgttttcttcttcttctttttgtttttcttattcttatt tttacGTTTCTTGTTCTTTCGTTTGCCGCCTTTGTTCTTTCGATTCTTTT TCTTGCggtctttcttcttcttttttttctctttggaACCTGAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070433TCONS_00070433Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_56supercontigscaffold_56:131577..135071 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
PRG4proteoglycan 4 isoform A preproprotein Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0 0 0 0 0 0 0 0 0 0.63 0.02 0.1 0.64 0 0.16 0 0.48 0 0 0 0 0 0 6.59 5.75 0 0 0 0