XLOC_043842 (gene) - C. hemisphaerica

Overview
NameXLOC_043842
Unique NameXLOC_043842
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_55:137599..146153-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043842 ID=XLOC_043842|Name=XLOC_043842|organism=Clytia hemisphaerica|type=gene|length=8555bp|location=Sequence derived from alignment at scaffold_55:137599..146153- (Clytia hemisphaerica)
AAATCACTGAGGCGTGAACAATTCGAAGGGATCGAACAAAAGTGTTTTGT TGAGAAATCTAAGAAAAAATAAAAAAAATAAATTTTTTTTGTGACATTTT GTTTTATTTATATGTATTTTTTTGTTTATATTTTTTGATGGGCATTTAGT TTAGGTTTTTTGGTAAGTGCACCCTTTAGAATTTTTTTCATTTTGTTTTT GTTCTATTTGAAATAGTTCTACATTAGGTCAGGGCCAAATCAGAACCATT ACTGTAATGGGTTTGGGATGACCTAGGATATCTTTTTTTTTCTGGCGTAT ACACCTTTTTTTTTATAAGAACGTCAAAAATTTTCGAAGCCTTCGGATGT TCTTAGTTTTTTGGATTTGAAGCCTAAAAATGTTCTTAAAATGTTCTTAT TTTCAGCATTTTTTTAGCATTTTGATGTAATTTCTTAAGAAAATGCACGT TTTTAAGTCTCCAAAGTCTTAAGGGCTACTTAGACTACACAATATATTGA CGAACAATATTCGACAATATGGTTTGCGGACCGTAATGTACGAAGTAAAC AACTGGTACTCTATTATAAAAAGGAATTTTCTTTCTGTAAACAATCCCCC TTTATTGTTGGAATATTGCAAATCCAGCTGACAATATATTGCGGACACCT TTTCAATATATTGTGGACATTCAGCAATATATCATCAATATATTGCCTGA CAATATATTGTGTAGTGTATGTAGCCCTTTAGAATGTTCTTAAATTTTTG GGCCTCGAAGCCTTATGTTCTTATATAGTTTGTTCTACGTGTAATTGTAC ATCCTAAATTCTAAGATTTTCAACATAGTGTATTAGGCCTTGATTACCAA GATTTTGATCAGAGGAACGGTTCTGTTGAATTTTACAATTCATGGTAATT TGATGACCATGTTAATCGATTACCCTTTTCATGAGAACAATTTTTTAAGA ACAATGAGAATATAACATATAATAATAATAAATAATAACAATTGCTGAAT TTCAAGTAATTTAAGGGTGACAGTAGTAAAAACTAGCCCAGTGGGTTTTA ACCTAGAATTCCTCAATTCTGCCCAAATACCAGAATTTTACTCTTAATAA GAACAGGATAAGAACAATTTGAGATCCAAAGTGCCAAAATGAAAAGAATA GTCGATAGCCTCAACAAAAGTTTTCTTGTTCTTAGAAAGAATACTTAAAA ACTTCTACCTAAATATCATAATTCCAAGTGCGAACTCAAGACATAAAAAA TGTCCAAAGTTGTGCGTGGGTCACCCGGTAGTTTAAAAGGACTTTTGTAT AAATTGTAATGTTTCTTTTCCAATAGATCATTCTCCAGTCCAACAATGCG GACAATACATATCATCCTATTATCTATCGTCATTCTCGCATCTTCATTGC AAGCTAAACGTTTCACAGATGTCGAGAAAAAATTAAACGCTATTAAAAAT CATCAACTCTCTGTTGAAAAATGGAAGAAATTATATTCATTAAAACCAGT AGCTGAAAAACCTCAGAAACCAGTGAAACCGCCAACAGCTACGGTAACTC AAACTGAAGAGAAAGTATCAAGCGCTGTTACCAACAAAAAGCCACAGCTT CAACAACAGCAAAAGCCATTGAAACCTTCACCACCCAAACAACCATATCA ACCAAAACCAGCTCCAACGATCGAGAAAGATCCTAACGAAGAAAAACAAA AGAAAGAAAGGTATGAGCAATAAGTTATACTCTTTTTTATGAGTAATGAG TTGTAGGCTTTTGATAAAAAATAAAGGCCATTTCATTGATTCAATGAACC TTGTCGAATCTGGAAGGATGTAGTTCTGGTTCCAAAAATGCTCCAACCAA ACACTGTTGTTAGTTATCGGAAGTCCATGATAAGTGGCGGTATGAAAAAA ACATAATATTGAAGTTGTAAAATTTGCTTTGTTTGTGATGTGTGGTATTG ATATTATTGTTGTCAAAATGTATTGTTTTATTTTTTTCATAGTTACAAAA ATAAAGGTAAACCTGGTCCAGAGGTTGTATGGCGAGTCGAGTCACACCCT GGAGAAGATGCCAAAGTTCCAAGCACATTCCAAAACGGTGTAGGACAACC ATCTACCACAAATAACCAGACTCCAGGTACTCAAGGAACTGGAGATATCC AACAAACTGACTTACCAGCTGCTGTTGGAAAACATGGTAAAAAACCATCC AAGTTAGGAAAGAAAAAAGGAAAAGGACATCGACATCATCATCATAGGAA ACATGCTGTAACTGGTACCAAAGTATGTGTTGTTTTTTAATCGTTTAATA TTTTCTTTAAGTTTGTTTTAACTTCTTTGATTCTTAATGTTTTTATTTTA TTAACAGAAAGAGGACGTTGCAATCAAAGCTGCCTCTTCAGCTGAAGTAA ACTTGGATGGTAAAGACAAGGACTGTCCACCTCCTCCACCACCATGTCCA CCTCCACCCCCACCCCCTCCATGTCCACCACCACCTCCACCTCCTCCTCC ACCGCCTCCACCACCGCCATGTCCACCGCCCTGCCCACCTCCACCATGTC CTCCACCTCCACCTTGCCCACCACCATGTCCACCTCCACCCCCACCCCCT CCATGTCCACCACCACCTCCACCTCCTCCTCCACCGCCTCCACCACCGCC ATGTCCACCGCCCTGCCCACCTCCACCATGTCCTCCACCTCCACCTTGCC CACCACCATGTCCACCTCCACCCCCACCCCCTCCATGTCCACCACCACCT CCACCTCCTCCTCCACCGCCTCCACCACCGCCATGTCCACCGCCCTGCCC ACCTCCACCATGTCCTCCACCTCCACCTTGCCCACCACCATGTCCACCTC CACCCCCACCCCCTCCATGTCCACCACCACCTCCACCTCCTCCTCCACCG CCTCCACCACCGCCATGTCCACCGCCCTGCCCACCTCCACCATGTCCTCC ACCTCCACCTTGCCCACCACCATGTCCACCTCCACCCCCACCCCCTCCAT GTCCACCACCACCTCCACCTCCTCCTCCACCGCCTCCACCACCGCCATGT CCACCGCCCTGCCCACCTCCACCATGTCCTCCACCTCCACCTTGCCCACC ACCATGTCCACCTCCACCCCCACCCCCTCCATGTCCACCACCACCTCCAC CTCCACCACCACCTCCATGTCCACCGCCCTGCCCACCACCACCAATCCCT CCTCCACCGATGGAAACGACCGAAGTTGAAACTCAGGTAAGATGATTTAT TCAGTCATGCATGCTTTCAAAAACATTTTTTCCATGTGACAACACTTACA CAATTTTGACATAACCGAAACATCTTTTAAATCTCTTATCTGGAGACACG AGCATACAAGACTAATACGGGGTCCGCAAAGAACAGCGAGATTGAAATAC CTTAATACAGTGGAGTCTCTGTAACTGAGGTTTATAGGGCAGTGTTAACC GAAGGGACGAAATTATTTGTTCGAGTTATGGAGACATTCGAGTTATAGAA TTTCGAGTTAAAGAAACTCCACTCTATCTTATTATGACTTTAGAATCAAT TTGCTATTCTTTCTATCCTTTTTTTACTATAGCCACCAAAATGTAAAGGA AACTCTGAAGCAACTATAAAGACAGGCAAACAAGCCAAAGACGGATGTTA ACGTTAGACTCATGACATATACATTGACAGACTGACTGACAAATAACAAA GACGTTTAAAGTCGTTACCTTCTAGCTTCTACGAAGCGACTCAAACAAAG GTTTTAATCAAAACAAAAGCACCCTGTACTGACGCCTTGGCCAACATTCT ACCTCATGTTTGTGTGTTTTCTTACATTTCTGTAGGAGAAAGAAAAGGAG ATCCCAGTTCTGAATAACGATCCGTGTTGTTAGATTCTTCACTTTTAAGA TGAATGAATGAATGAATGAATGAAATGAGATTGAAAATGACTGAAAGAAA CGACTCTCCAAGCTGCATTGATCTGGATTGTGATTTTCAGCATTTTTTTC CTTTATGCTTTTGTAAATTTAACAAAACTATTATTCAATTTGTTCGATTG AGCTTGAGTCTTTTCTTTCACTCACTTTCGCTTTTCATTCCTCGATTACA ATGTCTTAAATGCATGCATCCTCCATTTTTGTATTGAAAAAAATCATCTA AAGCATGAAGTGAAGATTTAGTGAGAGAATCGAGTCAAGCTTTTTAGAAT CATTTCAAGAATCAAAGAGCAATATTACACCCCTGTCTCGCATCCCCGGT GGAACTTTTTTTCTCAGTAGGGATAAAAATTCCTATTGAAATCCCAATGG GGATAGAAATTCCTTTGTTCCAAGGTTAGGAAGTGAATTTTTTTAAACAT TGAATTTCGAATGGGAATTTTTGTCAATCTTTCAAGTGAGTTCAACTGGG TTCCCAGCGGGTCTGTGACACAGGGGTGTAAAATACTTTTTTTAGATAAA AACACTAGATTTCATGTTTTGTTTATATTAAAAATCTACATTTCATGATT TGAAATCTGCTCTTTATTTCTTGAAAAGATCTTTTAGTTCAAGTAATGAT CATTATTTTAATTTAATTGCATTAACATTTTTGTAGATATTTATTGTGAA TTTTAAGAATAAATTCTTGTAAAATCAATTTAAAATTTATCCAAGTTACC ATCCACCTAAAATTTCTAAAGTCTCTTTCTGCCTGTAATTTGAATAGCTC AGTTTTGCAATGTTCATCAACCATATCTTTTATATTCGCGGTGTAATCTT TGATACTGAAACATACTGGAAAGGGATTTACTACCAACTCTAAAGTTTAA AAAACAAAGTTTCTTTCTCAACTTGTGTAACTCTAAAATCAGAAAACACA AGTGAAACAATCTCGTTTGATATCTTGTCCTTTACCTTGCCAGGTCTAAC TAAAGATATGTCAAATAATGTACCAAATCCATGAAATATTATAAACTTTG ATATTCTTTTGAATTTAGAGTGAAACCACAACAGAAACAGGGACAGGTAC AAAGACAGCAACCGGAGCTGGAGCAGCCAGTGCTGGAAGTGCCGGTGCTT CATCAGATTCTGAATCTGAAGCTGACACCAAATCTAAAGGTGAAAGTTCC GGTGATACAAGGGGTAAGTAGATTTCAAAGCATGAAAAATAACAGCTTTT TTAAATCATCAATTTATATTTCACTTCCAACCACTAGATTTGAACTGAAA GATTAGATATCATTCTTTGTTGTTAACCAGTTACTTTTTCGAAGCGGGCT ACACGGCTTTTGCGAAATGCAATTGGTTCTTTTCGCATGACGACGGGCTT TCACTGCACGGAGCTGCCTGCCGTTAGGAAAACTCATTGTGACGTCAGTT TTTCCAAAGAAAAATGAACACTGGGTTATTTCTCAGTACAGCCCTCACAA ACCGGTCATTATTGTATTAATGTTGTATTTCAAAAGTAGGGCTATTATTT TTGGAACATGATGTCTAATCCATCCCATACAACACTACAAGTCTTAACTT TTCACTTACATAATCAATTCTTTACCACAGCTGAAGGAGGAGCCAAAGGA CAAGGACAAGGCTCTAGTGAAGGTAACACATTCATTTGTTATATCAGCTT TTTTAATTAATGAGTCTAAAAGATTCTCTCAATGTTTGATCGTATGATAA GAAATTTTGCGAATATCGTGGCGTCTAAACGCCAACAAAATAGTTGAAAA ATTATTTTAAATTCAACACTTATCCATAATACTTGGAACTTGTGTGTTCG GTGTTGAAATCTGAAATCTCTACTATTTGATGTTCAGGTAAAGGTGGAAG CGACTCAGATGCAGGAGCAGTTTCAAAATCAGGTGCCGGCTCTGAATCGA ATGCCAAATCCACTGATGGAAAGAAAGATAAGAAAGAAGGTGGTGGCGGA GGTGGAGGTGGAGAGAGTGGCTCCAACGCCGGTGCACAGAGCGGCTCTAA CACTGAAACTGATACTAACAGTGTGGCTGCACTTGGAGTACGTGGCAATA TTGATGCTAAGCAAAATATTGGAATAGGAAGTCAATCGTCGACGGGAACT GGAACGAGTACGGGAGCAGGCAGCGAATCAGAGTCGACCTCAAGTGCAGG TGGAGGAACTGGATCGGGTGTTTCTATTGGTAGCAAACAAAACAAAAAAG ATGAAACAGTTCATGATAAACAGAGCAAAAATGCCGTGACCGACAACAAA CAACAAAAGAAACAAACAATGGGTAATGGTCGGAAAGTCAATGTTGATGA AACCCAATCGAATACGAAAACAACGAAAACGTATAACGAGCACGAACAAA TTACGACGACGCAAACGAATACCGACTCTTCTATGGGATCGGGAAAGAAA AATGTCACCAATCAAGAAAATAAGAAGAATGAAAAGAAAAATGCAAACAA ACGTGATCAAACTGAAAGGTATGTGATCCTCATTGTGTTCTCATTCAGTT GAGAGAAAATTTTCACTTGTCTTTTAAAGAATTCATCGTCGCACTTCAAT CTTAGAATAGTTCTTTCTACTGGAGCACTATAAAATAAGAGTGATTTTAA TGTCATTCATTATCGTGAACAGGTTTTCATTCGAAGCCTGTTTCTATCTC AAGGATAAAATGATGCAGCTAAATACCAAAAGGGGTGGGAAGAAGAATAA AAAATTCAGGGTATTTAGAATTTACCTTAAAGGAAGAAATTTTTGCGGGA ATTTAATTTGGCGCATGGCCGCAAAACTTTTTTCAGAGGGAATTTAACTT GGCGAATGACTGGAAAAATAAAATTTGAGGGTAATTTAATTTAGTGGATG CAGGATAATTTTTACCAAAATCGTTATCAATTAAGTAAAAAAAAAACAGT TTTAAGGCCTAAAATAGCACCAATTTGGGAATGCGTTAAATAAAATAAAT TTGGCGGGAATCTGATTTGGCGGATGGAGGAAAAAATAAATTTTGGCGGG TACTTAATTCTTAGTGGATTTTGGATTTCCACCAAATCCGCCAAATTTTT CACCAGGGTTCATTCTTTAGTCGATTTTTTTGGGCCAGGTTCCCTATGGA CTGTGATATTCAATAGATAAAAAACACAAATTAGTACATTGATTTCTTAA AACTTTTCCAAAGCATCGAAACGACACTTAATCGTATATAAATGGTCAAA TATTTGCATATAAAAAAACACTTCTTGAGTTGAAAGGGTCTTGAATTAAG ATTGGGATACGAGAAAGTGGTGATTCTTTCTCGTTGAATTTATATTTTCC AGGTAGTGCTTCTCCCTTTTTTCTTTTTCATAGAACGAACGGTATTTTAC CAAGTAGTTGTATTGGAATTCTAAACGCCAATCCCAATGCACGAAGTGGA AAATATAAAATATCAACGGGTAAAGACACCACTCAGGTTAGGATTCTTTT TTCTGTTTACCCATTATGAAATCTCCGGGGATGTACATTTTTAGAATATC CTTATGTATGAGAAAAGCTTTAATGGGAGCACTTATGACGATGTTTCCAA CGCAACTACCAAAAGAGAAATGAAATTTATATGGCACTAATTGCTCTGCA AGTAGAACAAGTTTATTTCCTACCATGTTTTTTTAGCCTTTAAGTGTATA TTGGAGTGGATACAAAATTATTAGAAATCCTATGAGGAGAAAACATCACA ATATAGTTTAATTCTATTGAAACTGAAAACCAGCAAGTACTTATTGGTTT GCTAGTGTCTAAATTTCTCATTTTTCCGCAAAACTTAATGCACTATAGTA TAAGGGTCGATGAAAAGGGTTTAAGTATGATTGATAAACTTTTACATCGA AAGCATTTCAGTTACATTAAAGGAAGAAATTTCGGCGGGGATTTAATTTG GCGGATGGTCGAAATAGTTTTCTCAGAGGGAATTTAAATTTAAAATTAAA TTTGGCAGACGAGGGACATTTTTGTCCAAAAAAGGCCATTTAAAAAGGAA AAGCCTGTTTTAAAGCCTGAAATAGCACACATTTGGGGGAATAAATAGAG CAACTTAAATTTGGTGGGAATTTAATTTGGCGGATGAGGGAAAAATTAAA TTTGGCGGGAACTTTGGCGGGAAGATTTTCTTCCATCCAAAATTCTTTCC TTTTAATGTAGGTTTTACCTCACTGTTATTGTTCTTTTTCAGATAAATTG TGATTTCAGTCACCATTCGACTCAACCTTACAAGAAAGTCGCAAGTATTG ACAAACGACAGAAAACTTCATCGTCCTAAAATTTGTGTGTCCGTAAAACT TATTTTGTAGAGTAGATTTTTTATACTTTAGTACATATTTATTTGTAATT TAACTGAATTGACCTTAAATTTGATTAAAATTTGACCAGAAAGTAAAATA AAAACTTTTATGAACTGAATTCTTTTTTCCATATTGTCTTGACTAAAAAA TAGTTCGTAGAGTACATCGAAATTTAAGTTTATCGAATATATACATCATA CGAAAATTTCTTTTCGGTATCTAATTCTTTTAAATTAATATAATCATATT AGTTCTACACTAAAAAGTGTATACATAGCAATATGAAGTTGGGAATAAAC TTTTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070393TCONS_00070393Clytia hemisphaericatranscript
TCONS_00070392TCONS_00070392Clytia hemisphaericatranscript
TCONS_00070391TCONS_00070391Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070392-proteinTCONS_00070392-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_55supercontigscaffold_55:137599..146153 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.73 0.98 0.53 0.57 6.03 6.17 57.4 65.86 9.97 11.45 34.3 24.81 44.02 39.93 28.35 99.59 53.49 55.07 0.53 0.39 33.56 38.24 29.02 28.89 47.02 54.18 7.22 2.73 0.34 0.44