XLOC_043779 (gene) - C. hemisphaerica

Overview
NameXLOC_043779
Unique NameXLOC_043779
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_52:50838..61383-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043779 ID=XLOC_043779|Name=XLOC_043779|organism=Clytia hemisphaerica|type=gene|length=10546bp|location=Sequence derived from alignment at scaffold_52:50838..61383- (Clytia hemisphaerica)
CACATTTTTCGCTGTGACCTACATGAGCAATACCCTATAAGGAGAGAACA CTTTCCGGACTGCAATAGCAAGAAAACACGCCAAATTCAAAGGAGTTGTG AGGTAGGAATTGAAATTGTGTAATATTTCTACGATTGGTCTTGCACTAAC GCAGGAAGGGTCAGTACTAAAATTTCAGACAGTAAAATGATTTTCTGGAA TTTTTGCATACCACAACTTTCAAGAAGTACACAAGAATTAATCACATTTT AAGGTATGTGTACACCTTTTTTCCGATTTTTTGTCAAAAAAAATTTTTTT CAGTCAAAGTGGAAGAAAAGTTACTGGATTTCATTTTGGTAAAATCGCGA TCTTAAAATCTTTTTTTGATCCAGAGTTATAACAATTTAAATTTTAAAAC AAAGTTCGTCTTATGATGGATTATTTACTCAAATAATTGTCTCTTTCGGA AACAACAAAGACAAAAGAGAGAATTCAGCTGATGTTNTAACAGAGATCAC TCTATTTTTGGTATTCTCAGGACCAATTTTCCCTGAAATGCTTATTTTGG CAACATGAAATTTATTTTATACGCAAGTAAATTCTTTGATACTATAGAAT GAGTAGTGATTTATGAATTGATTGATAAAATAAGAAGAACCACCCCCCAC AATTATTAGATCAATATTCATGATATACACCACTGCAATGATTTCACGAA ATTATGCAACTTTTCTGTTTTTGTTTCCACCCAATACGTCACTTTTTCTT TTCTTTAAGTGACGTATTGGGTGGAAAGTTTTCAAAAGACTCTTAGTGGT GCATTGCAATTACTGGTCATTCTTGAAGAATGGATACACATACAGCCCTC GAATTTCAGGTCCTAAAAGCCGACCAAAGAGTGCGTATGGTCGGCAGTTC ATTGCCGACCATATTCATTGATTCTCTCGGCAGCCGACCATAAGTTATCT TTTAGGTCAGCAAAGCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNTTTTATCCTGTAACTGTAAAATGAAAGTCTCTA ATAAGAACCATATCGCACTCAAATAAAAAAACAAACATTGCCGTAGCCTT TAAACAACTTTGCCGACTTAAAATATAGCTCAGATCGGCATTGCCGACCT AAAAACAAGCTTAGGTCGGCAAAATTTTGCCGGCCTTCGGCCGGATTTGG ACGGCACTTACGTGCCGACTTACTTTTACTTGAATTTCGAGGGCTGCATA ATTTTTAATTATTTTTTATTCAGAAAATCATCAATAAATGCTTGCCCACC AACCAAATGAGACATCATGTTTATGGTGAGTCATGATAAAGTTTCTTTCA TTGAAAAAATAAAAGTTAATTACTTTGTAGTCATTCCTGAAATCGCACTT TTGTGACATTGTTTCGACATTTTTAAGTATGAAAAACTTACTAAAGAGAC AAAGAAAGGCTGTAACTCTTGATAGAATTTGAATTATTCCAGCGGTTCAC TGCTTGTTGAAAAGATAAAAACAGGAGTGGAACATTATCAAAAAGAAAAA TTTCAAAAAATATCCAAAAATGAAAATTGAAAATGAAGAAGAAGAAAATT AACTTCTTCAATGATTATGCTATAATTATCATTGTTTACACTGAGTGATT CTTTGATTTCATTTTAAAAATTCATAAAAGTCGTATAGGGTTTTGAGTCG TTTTTGGACATTATTTTAATAATAAAAAGTTTCCACTTTCATTACTAACC CTAACCATAACTAATTTTCGCGGGAACTAATTTTCGCTTTTTCCACGGTT TTTAGGCTAGACCGCCAAAATTAGAAACCGCAAATTACAAATTTGGTGAT TTTAATTAAAAAATTTGAAAATGAAAGAAATGTATCCAAAATAGGTAAAA CTGCGAAAATTCATTTCTGTGAAATGCTGTTTTTTTCGAATTTTTTTTTC GACCGCCAAAATTAGTACCCGAGGTACACTTCTTAAAACAATCAATGATC ATTTTTGATTTTTTTTTTCGACCGCGAAAATTAGTACCCAAGGTGCACTT CTTATAAACAATAAATGATAATTTTCTTCTTTTCAGATGCACTGACGAAA AGTTTCTGTTCAGAACTAACTTGTGAACATTTTTATTCACAATTCGAAGA TGTAAGTCCCACCTTCTCTCAATAATGTTAGCCATTGTGCTGTGGTGACA GAATGCTCCACACATTAACGTATAGACCAAAATATCGATTTCAAATAATC TTTCTTGAAAAAAGGAAAAACAGTTATTTTATTTTCTATTAAAAGACGTC TTGCTCTTGTGCGATGTCTCTAAGGGGCAAGTAGGGGCAATACATGCTTA AAAGAAGAACATAACCATAGAAACTTTATTGCTTTTTCAAAAATTAATGG TTATAAGCAGGTTCTAGGTAGCCCCTAAGAATTTAGGTGGTCCCTAGGAT TTAGATTGCCCCATACTGGAAAATATTCTAGGTAGCCCCTTAAAGTTTAA AAACCGAGAAAATGTGAAAATTCAGAAATAGATTATATCGGAATTTTTGA TTTTTCTAAAAAAGCGATGCATTGTGGGATTGTTTCGGGGGTATTACAAT AGAATTCCCTCAAGGAATTCTTTAAGAGATCTCTATTGTAATACTCCCGA AACAATCCCACAATGCATCACTGCTTTAAGAAAAATCAAAAACTCCGATG AGGTCTATTGTAGATATACTCGTTTCTTGCTTTTAAGCATTCCTCAGTTG GTTTTTNNNNNNNNNNNNNAAATTTGTCCCGCTAAGGGTCGTAAAATTCC CAAAATTTTCCTTTGTTTTCTACTTTTTAGTCCCGGTAAGGGTCCAAAGT TCGAAAGTCGGGCAGCACTCCCCCGTCAGCTCGCAACCCTAGTACCCCCC TCCCCCCGGGGGTGGTCCCTAGGATTTAGATTGCCCCATACTGGAAAATA TTCTAGGTAGCCCCTAAAAGTTTAAAAACCGAGAAAATGTGAAAATTCAG AAATAGATCTTATCGGAATTTTTGATTTTTCTAAAAAAGCGATGCATTGT GGGATTGTTTCTCGAATATTGCAATAGAATTCCCTCTAGGGATTCCTAAG AGATCTCTATATTTTAATACTCCCGAAACAATCCCACAATGCATCACTGC TTTAAGAAAAATCAAAAACTCCGATGAGGTCTATTGTAGATATACTCGTT TCTTGCTTTTAAGCATTCCTCAGTTGGTTTTTCAAGGATAACACAAATGT GAATATATTCATATTTTCTTTGATTTTTAGATGAGTTTGTCGACATTGAT CTTGTTGATTGTCTCAATCCCTTCCATCATCTTCTCCTGCTTTGCTGGTT GTTGGAAACTCTGTGAATATCTGTATGTATCAATATCAATTATGGATTTT GTATTTTAACTCATCATAGATTACTTCAAATTCTGCAAGGGTCGGTCAGA CCTAGAATGCAGAGTCTCTGAAGAAAAAGGGTCTGTAGCACGTGCTGTCG TTCTCCAAGATGAATTTTGATATGATTAAAGCTGTTACAGAAGAGTGTCT TAAAGTCTTGATTACTGATCTATCCTCGTATAAGTCTAACTTCCATTCAT CTATCTCCTGGTTTTCATTCATCCTCTCCTGGTTTTCCTCCACCTTCACA AAGTCCTAGAAATTCCTTTGATGGAAATCATTTAACGTGTTTCATTTAAA CAACAACTTATAAATATATTTAATATATTTATAAGTCGTTGTTTTAATCT CATGTTATTTGCTTACACAGCACTCTCAATCAAAGGAAATAACAACATAC TCCCTTTTCGGCACCGTACAAGCTTTTTGAGAAATTCTTTTGTTTATAAT GCTTTGTCAGCATAGAGGCGCGACTCTTTTTTTATCCTAAACAAATTATA CCTTTAACTGTCTCGTTCATTGTTTAAAGGTCTGAGGAAGACGAAATGTA CGTTCCAGTATCAGAGCTTGAGAAACGACGCAATGAGCGGCTCCAACGCG TCCGAGACGCACAAAACGCCGCCATGAAGAACCGAATGGGAAGGTATGGG AATAGCACTCTTGTTCATCGGAGATACAGATGAGAAAAAAGGTTTGTCAC GAAAGATCTGATGCGTAACGTTTAGTTGCTCTCTTTTTAAGTTTGCCTTA TCTTATAACTTCCTTTCTGATGTACCTTTAGTAATTTTTGTAAAGGGCTT ACTTAACACTTTCCTCCCTTTTATGATTTTCCCTATCGAGTTATATTCCA GAGTACCCAAACTGGTCTTGTTGGACCTACATGGAGGTCCTATAAATATT AACCTTCGTCCGTCCGTCCGTCTGTCCGTTCGTCCGTCTGTTACCAGCTT TTCTCGAGATTGGCTCATTAGTTTTTTCTGATTTTTGGCACAATGATGCA AAATGGTAATGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAT TTTCATCTTTAGTTTTTTCTGATTTTTTTGCAGAAAGATGCGTATTCGCA ATGCTCAAAACATGGCTGAGTTCGATTTTTGAGAAATTTTTTTTTCCGGT TGAATTTGCCGGAAATCGCCGTTTTTGCAGATTTTCATTAGATTTTTTTC CTTGTATTTCTATGTTTTTGACACAAAAACATTATTGATAACAATGCTCA CCATCAAGCATGATTCAATTGTCAATAAAACTGATTTTTGCGACCAGAAC TTTCTATTTGTTTTTTCCCTACAANNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTATCAACAA TCAATGATGAATTTATTGCGTTATGCATTTTCGCTAAACGCTATATTTTC TGACTGATTTTTTTCTTCTCGCATTGCTATCTAACTTTCATCATCAGGTA GGTCCATTCAGCATCTAGCTTGTTTGTTCATAACCTCCTCCGACAATCTC TGAGTAGCGTACTTTTTTGAGAAAAGGATTCATAAGATATGGAGAGATAT GGGTTTATTAGAATTAAGGTTAAGAGTTTTCAATGCTAATCTACTCACAA TTACTCTGTAAATTGACTATTAACTACCCACCCGTCATTAAACCCACTGA TATTTTAAGGGTTGGTGCCTAGATGTGCTCCAAATTTAGACTCTTTGGCC ACAAAAAAACGGTGTCTAGTGGTCTAGCTTCATGATTGACATATTTGTCA TTTGTTGGTTGATAATTTCTTGACTGTATTTTAAGAACGTGGTCGACAGA GAAAAATTAGTGGCCAAATATTCAATGATTAGTGTAATTTGTGTTTTGGA GAAGAAATTGAAAGTTTGAAAGCCACGAGATCTTTTTGTAAATAATTGTC AATACAGTGTTGGTGACTTCCTCCTTCTGAGCTGGTATGTTTTGCAACCA GGTCGTTGAGTACCAGAAACCTATGGGATTGAATCCCTCCCAATGCAAAA TTAAAACTATGAAAAGAGACGAGCATTCCTTGATATTCCATTGGGTCGTA TTAATCCCTGAGATATTTTTCTAAAGGCTCTGGCAGCAAAGCTTTTGACC AACTGTCCTGCTAATCTGACATTAAAATCAACCACGCTTCATTCCTTAAA AAAGCTTGATAAAGTTTATCTTGCTTGAATCCGTGAAAGCTATTCAAAAA TTCAATCACGTTAGATAAAAGTTTTTCCAAAGTTTTTATTTGCTCAGCTC AAGTTTGAAATGTGACTAAAAGTTATCATGATAGTATTTTTCAAGCTGTA ATAAGCCTCGGAAACCCGAGTTACAAAAATTCGGGTTTTCCGGGCCTCCG CCATAATAAAGTGTATCAAGTTTCTAAGCGTTGCTTGTTACAATTTTGTT GCAATTCATTCAAGTAACAAATTGCTAACTGATTCAATTAGACGACTTCC TTTGAACTTTTTAAAGTGTTTCAGGATGATTAGATGGGTCATTTTCACAT GTGTTGCAGGTTTCCTATGCCCACTCAAAATCTTTTGGCTTTCTTTAAGC AAATGAAGAAATTTAAGAAATTCCTTCAGCTAACTAAACCATCGTTGAGT GAATGCTTTAGAGGGCTCCGTTAAATTGAAATGTTTTTTTCTCAAGGGGC TCTAAAAAAGTGATCTATTGTCTCTACAACCTCCTCTACAGTATTTGAAA AGAAACTTTCTTTATATTCTTACTCATACTCTCTTTCCTACTCACAACGA GTTTCTTCGTTTTCTTATGGTTAAAGTTTGTCTTTTCAACGAGTTCCTCT TTTTCTTCTTTTTTCACGAAACCAACCGCGCTTCTCTAATTCTGCTAAGC ATGCGTGGGTCTCTAAACTAACATATCTGTATTAGCGTAATAATGGAGTA TTTTCGGTAGCCAATAGCGGTGGAGTTGCATAACAAAAGTCATTTTCTAA TATTATACCACCATTCATTTTGTTTATTTGAGCGTTCGAACGTACTTTCG ATATTGATACTTCTGTCTGCAAATTTATGCAGTTGCATTGGGGGGGGGGT TAGCTACCGTAATTTGGCCTAATGTCGACATCCCTCATCTAATTCCGACA CCTTTTTTATCAGCTGAAATTGAAAGATAGGTCAAAACTATTTTTCTTTG CTTAGTGGTCAAAGCCTTTTTCAATCAGTGTTTAAACTTTCATATTATTC CTGTCTCTAAAGAAGGGTGTCGGAATTAGACGAGGGATGTCGATATTAGA CTAACTTACGATATTCTAGAGAAACCTATATGCAATCTATTTATACTGAA CAACTTTTATGGTAGTTACATCAGTTTCTGTGCGTAGGTCAGAAGTAAAA AGAGAGATTGTCACGCTATTATAATATGCCGGTATTTTCCAAACAGAACT TTCATTTAGGGGAACAAATTTTTTCGTTTATCAAAGCGAAATTTAGGCAA AAATAATGTAAAGCTCGTAAAACTTTAATAACATGACGTAAGAAGCTGGG TTAGACCCTTTTTGTTCGTTGTGAAGTTCGTTTTTATTATGAGTAGTTGG GGCAGTGTTGCTAGGTCATCAGATTAAACATTGATCAAAGAACTATGATG AGTTTTATTAAATTGTGATTTGACTATAAGAAGGCGATTTATAATGAGCT CAGCAAATCAGTACGTTTGTAACGTTATGACATTATGCAAAGATTAGTTC AATTTTACATAAGAAAATTATTTTTGTAGAGACGCAGAGCTGTCATTTCA AAATTTCTTTCTGCAACATTCTCCATAACATGTTTGCTTTATTGGACTGA TTTTTTACGTACTTGTGTTTAAAAAAATCTCGTTTTTTATCCAAGAAAGT TACATCTAGCACATGAATCTGTGTTTTCTAAAGTCTGTTCTAAAGATTAA GAAGCTGACAAAGTTCTGTCTGACTAATAAAGCCATATCTCTATGACCTA TCAAAGTCTTTTTTAATAATCTTTTATCAAGAACTAGCTTTTGTTTGGGT TTTAGTGATAATGTTAAGCGTGGGGGGATGGATAAACTTTCGAATCTAAA GAAAATTTGATCATCCGTGATGATTTTACCACATTCCTATTTCAATTGAA TTGGACCTAATTCTTTTCTATAATGATAAGATTCTAGCCAATCAGAATGC TTGTTTCAACAATCTCCATGGTTGCATATCTAATTATGATAAAATATTAC ATTACTTAATAGCTCATCAAAAAGCGTCTTGTAATAATGTTATATTCGCT CTTCCGTCTATTTTAGGTTTTTTTGTTGTCTTCTTATGCAGAGGTTGAGA GGATTATTGGTGTGTTGCGAATGAATAAGAAGCTTTCATTGAAAGAACAG TAAAACACCAGTGTCCTGTGAAGCTGTTTAATGCTGTCGTATGCGGTGAT TCAAATGTTGTGACGGAAACAGAAGTCTCTTGGTGAAATCAAGCTTTTTC TAAAGAGCAGTATTGTGTTTACAAAGCAACTGATTTTGTTGCAACGTGAC TGATATTACATTGTTGAATCAAACTACGTTTGAATATAAAGAAAGGAAAG GCTTTTTTGGTTGACTCAAAATTAAAGACTGTCAGAACGAAAGAAAAAAA ACTTTTTTATGACACAAATGAGATGATCGCTGAATAGTGATATCATTGTT TTGGTGAAAGAAAAAATTGCTCCAACGACGGAATCGAACATCCTTCTTGT TCAAACCAAACATCTAGATTGTAGTTGGACTTAGTTGAAGAGGGGGAAAT CACTCACAAAGTTGAAGTACTTCGAAACCCTTCATTCAGGAATCCACTGG ACTTGATCAATTACATTTGCAAGATAATTTTAGGAAAACTTTTCACGAAC ATTAAACAACTCCTGAGAAAAAACCCACAATCATGTGGATTGACATCAGA GATTGTGGAGAATTTTTCACCGATGGAACCGTTGTGAACGATGGTAATAT TACCGCACTGATCGCCATAGCATATGTCATCATTACCATGGCGTTTCTAT TTCACATTGTTGGTATGATCCTCATATTAACCAAATCATCTGAAATGACC AATCAATCGCTATTACTGTTACATCTAAGTACTGTCTCCATCGCTTTGCT AGCAGTCAATGTATACGCTGTTTATTCATTCGCAAATAGTTTACCAACGA ACATACCGTTTCGAGTCACATTCTACACCATATACATTGCTTACGTGGTG AATTTGTTGCTGTTAAGTATGGATCGACTTGCATTGGCGTTTCTTGATAT TCGATACTCTCACGTCATGAGTCGGAAAATGTTCGCCCTTCAAATCGCTC TGTTATGGATTTTATCCGTCACTTTTGGACTGGCAACGAAATACGTAGCG GCGCTTAACGGTAGCATAAAGATACGTCAAGAAGTTTCATTTTCGTATAA CGGATTTGTTGTCTTATTCACGGCGTTCAGTTACGTCACTATATACATCC GCGTACGATCGTCCAGGGATAATGTCCAATCAGCGGGAAGCACGTTATCA CGTGACTTATTCAAGAAGTATTTGATTCCAGCATGTTTGGTTCTTTCGTA TTTTTTGTTGAATTTGGTCCCCACCATCATTGAACGTTTTGTCAATAATA CGGCGCGTCGTCGTGATGTAACGATCGCTCTGATTGGTTTAAATTGTCTG AACAATCTGATTGAACCAATCATTTACGTCTTCTTGCAACGGAGTATTCG ACAGAAATTGGCGGCGCTTTGTCATTTGTGTTTTGATAGGATTACCGTTT ATCGAACGATCAGTGAAAACCAAATTGCTGCACCGGACAAAGAATGTGCA GGGTTCAGAGATAACCTTGGAAGTGAAACTACTGATTNCTCTGCGCCGGA CAAAGAATGTACTGGGTTCAGAGATAACCTCGGAAGTGAAACTACTGATT GATAATCACGCTTGAATTATTGCTATAGTTGACTCTCTAATTCGATTTTC AAGGGAACAAAAATTTTATTCGAACTACCATAGAGAAAGATTCGAATAAC AGAGAGTAGTTTGAACTACTTTCCAACTGAGCGGGCTAATATCTTAGTTC GAATTACAGAAATATTCGAGTAATAGAAATTCGATATATGGAGAGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070303TCONS_00070303Clytia hemisphaericatranscript
TCONS_00070302TCONS_00070302Clytia hemisphaericatranscript
TCONS_00070301TCONS_00070301Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00070301-proteinTCONS_00070301-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_52supercontigscaffold_52:50838..61383 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
5.84 5.03 2.98 3.87 12.09 8.61 8.05 9.45 7.4 9.64 9.47 7.46 5.34 7.05 4.21 6.42 5.77 6.85 3.7 4.89 6.69 9.17 6.3 6.76 6.72 12.6 9.24 11.01 6.83 5.22