XLOC_043737 (gene) - C. hemisphaerica

Overview
NameXLOC_043737
Unique NameXLOC_043737
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_516:193264..197089-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043737 ID=XLOC_043737|Name=XLOC_043737|organism=Clytia hemisphaerica|type=gene|length=3826bp|location=Sequence derived from alignment at scaffold_516:193264..197089- (Clytia hemisphaerica)
GTTATTTTCATGTATTTGAGCAAAATATCCAAAAATTGGCAAAATCTGAG
GATATCACTTCCTCGACCTGCCTGATTCTTACAGAAAATGGCTCAAGTGT
CTGTTGAGGCATCATGAGAGAGAAAATTTGAACTCAAATGAAATCATAAG
TCAAATATTCAATTCAAGTCTTCAAATCAAACTTTCAAATCAAATTTCAA
ACTCAATTTTGATTCTACTTTCATGGACAGAACATTTACACCACATATAT
TTCTGGCAAGTTGGTAAGAATTCATTTAATTTATTAACTTAGATTTCTTT
TATTTTCCTCTAAAATACTTTGTCAATATTTTCATTATTCTTCATTTGTC
TCACTTTGTCACATAGATTAAATCTTGTCATTTTTTTATTCATTCAGTTT
GAACTCCATCATCAAAAGTTACGAACACTTGTGTCTATTCATTTTCTGTT
CGTCTACACCACGAGGCTGTATGAAGCAGGGATTCAGAGCCGCCGGACGC
CTGTCAATACTTCGAACGAATCCTGGGGGGTTTCAGGGAGAGCTGTTGTG
ATATAAGAGTAGACAGTTTAAAGAATAACAAAAGGTTTGGTTGTTCCAGC
TGGTTCGAATTCTTAACGGCGTAATCAAAAGCCATCGATGCGAAAGCTGA
GTCGACAAAACTGGCCTCTTATGGAGTCACTGGTTTAATGGTTACGTTTG
GTTATGCTGTATTACTGCTCTCTTCAGCCCTTGCCACCGACAAAATTTCT
TCCTATGCTTACCTAACTCCTACGCTCACTTTTCCCACGTGATACCGTTT
CAGCCCGAATGGCGTGCATGCCAGTCTAACGAAATCCTTGTTCCTGATCC
AACAGCACGACACCACTTGATTCTGTATGTACAATTGCTATCACGAATTT
TACAAAACACTAAGCCCACTTGCAATGCTCTATAATAAATTGATCCCGTC
GAATGTTTGGAATGTTTTTAGAAGAAACAGAATAGAAGCTTTATTTTAAT
TTTTGAAAACTTGAAATTTATTTAAACGTTCACTCACCCCGGGAAGGAGG
GGGTACTTAGGTAAAATGGGTTCTGGGTATGTACGAGCCAGGTACCGGGT
ACCAGAGGCCAAGTTTTCATCAGAGAAAATGTTGACATTTATTCAAGCTC
AACCATGTCCCCGTGTATCCCAGGCTTTTGTACGTTACTGATTGACCGCC
AGAAAGTACCCTCGTGTTGGCTGATGCGAGCTTCCCCTTTCAGAAGAGGG
GGACTTCTCAAAACGATAGGTATCATAAAATATTCTGACGTTATACTGGA
ATGATTACACAGACAATGTATATCTATAGGGTATATCTAACTAGCAAGCA
CCTAACTAAAAACCAGGATTTTACATCTCGTCTCTTAGTGAGTTCCACTT
TGACAATTTTCAAAAAATAGAAGCCTTTCAAGTGCTTTGATGCAAATTCG
ATTTAAGCATCCAGCGAGGACCTTTTTTTAAACATCTGTTTCCCAGGCAT
AACCTTCCTGGAAAATTTGATCTGCTGACCAAAAGCATCGAAAATCTTAT
TCCTAGAAATGAAGATCTGTTTCTCCTCGAAACCTAAATTTTTAGTATTT
AGTATTTTAAAGTATCTTCCCTAGAAAATTTGGTCTGACAATTTTCAGAA
TTAAAATTTTGATCTGTTCTCCCGGGTTGGTCTAAAAAGCAGGGTAGCCA
ATTGGGGTAGCCAATTGGGCTAGGTTGTGGGGTACCTAAATATTTTACAG
ACCAGAATAGAAATACCGAAAATGAATGNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNTTTCAAAAGACCTTTTGTACCTATTAT
AAGCTGCCATATTTAAAAATTTTGAAAGGAATTAATTGTTTGAAACATCT
AAACATGATTTAAATTAAACAAGAGATTCAATAACAAAGGATTGTTAAGA
TATGACAAGATTAGAGATCATATGGCTTAAAGGCGATTCCAAAGCTATTA
TCATCGAATTACAGCTTCACGAAAATAACAATTAAAAACATAAATAAAAT
CTAAATCTAAAATATTGAAAACTGTTTTGTATATATTTTTTATTCCGGTC
TGTAAATTTTCAATCGAAGCCAAGAAGGAAGACAAAATGGCGCCAGGTCT
CTTGAGAAGTAACAAAGTTCAGTACATTTGGCAAAAAGGCTATTGTGGCT
GAAGTTCGAAAGGAATCTTAAATTTTACTACATGGAATCATTAACAAGAT
GTTGTAATAGTTATTTCCACATTAAACAGGTTTCAGATTTCAAAAGTTTA
GGCAAAAAGAGGTACCCCATAACCTAGCCCAATTGGCTACCCCATTGGCT
ACCCTGCTTTTTAGACCAACCCTGTTCTCCCAAGCTTGTAAGGAGTAAGA
TATCTGTTTCCCTCTCCTGGAAATTTTCATCTGTTTCCCTTGCTTTTTGT
GATTGATATCTGTTTTCCCCCAGAAAGTTCAATCTGTTTCTAATGCAATA
TCATCTTTTTGGAAATATATATCTGTTTCCCAATTTATTATGTCATCTCC
TAGAAATATTGATCTGTTTCTCTCTGATGACGTCATCAGCTGGAGCGGGG
AAACAGATAGTTTTAAGGAAAAGGTCTTTCCTAGAAAATCAGACCTGTTT
CCCATTTTTCAAAAAAAGGCACTCTCCTGGAAAAGGGAAACAGATATTTC
GGGGAAATGGGCTCGTTGGCTGCTTCTGGGAATAGACGTTAATTGCGTAG
AAAAAACGCGGGTGACGTCTAGTATAGGCTAATATCTAACGTGCGTTATC
AGTAAGTTGGTGCCAATATCGATGTCGCGCATGCTCTCTATCATGTAAAA
AAGGAGGCTTTGTCCCTCTTAGGAATAACGAGCTGATCATTGCTGAGATG
GTAGAGGAAGTGTGCAAAGACGTTAAAGTTGAACCGATGCTATCAGAAAT
CCAGGAAGGCAAAGAAACGAGAGGAAACCAATCGAAAAAAGCAAGACTCG
ACGTAAGCGCTGTTAGCTTTTAGACAAGGAGCCAACAGGCATTTTTCGAC
ATAAGGGTCTTTGACACCTACAAGCCCAGAGATACTGAAACCAAGAGCTT
GCAAAGTGCTACGAAACAAACGATAAAGAGAAGAAAAGACAATACAACGA
GAGAGTACTTCAAGTTGAAAATGGAACATTCGCTCCCCTAGTCTTCTCCA
CGAATGGAGCAAGGGAAAAGAGTGCATTGTATTCTACGTCTAGCGGGATT
AGTCGCATACAAACGGAAATGTAATGTCAATGAAATTACGCGTCCAATAT
TCGCGCAAAACTTTGTTTTTCGCTTCTTCGCGCAAAACTTTGTTTTTCGC
TTCTTCGCGCAACAATACGGTGCGTGCGAGGCTCGCAGTCGCGAAAGGTT
ATCTTGTTAATAACCTTGAGATTGAGAGTTTGAAATGTTGTGAGCAGAAT
CTGTGATTGTAAACATTTTATATAGTGAAAACAATTATAACAGTATAAGT
AGAAAATTACAGTGCGGGTAACGACCCAGGAAATTCTAATTGTACATATA
AAATCTTTTTGTGTTTACGTACGTGTAAATTTTTATTATGTAAGTGTAGT
TTTTTTTAGAAATATATATGCTCGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00070240TCONS_00070240Clytia hemisphaericatranscript
TCONS_00070239TCONS_00070239Clytia hemisphaericatranscript
TCONS_00070238TCONS_00070238Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_516supercontigscaffold_516:193264..197089 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.49	2.12	2.58	3.44	4.84	3.19	5.43	5.48	4.01	4.25	4.15	4.53	3.14	4.03	3.31	1.84	1.86	1.74	2.33	3.52	2.6	3.63	1.96	2.25	3.59	4.21	5.46	6.54	3.59	3.41