XLOC_043540 (gene) - C. hemisphaerica

Overview
NameXLOC_043540
Unique NameXLOC_043540
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_511:58123..67202-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043540 ID=XLOC_043540|Name=XLOC_043540|organism=Clytia hemisphaerica|type=gene|length=9080bp|location=Sequence derived from alignment at scaffold_511:58123..67202- (Clytia hemisphaerica)
AAAATGGATTTCGTGAAGCGTGATGCTTTGAAGAGATCACTTCAACCTCT
TGTTAAGGTAAGGATTTGGATTTCTAAAGAAAAACGGCGTTTTGATATTA
CGTTGCACTTTCCATTATCCCTCTGAAACAAAATGAAGCAATTCTATAAC
TGGCCAATTTAGGACGCAATGTAATTTTTAACCAATAGGATGGCTTCATG
TCCTTCCGAAACCATGTGGAACCGTAAGGTATTCATGAATTTTGAATCAT
TAACATTTGAGCATTACAATTGCTGCGAATGTCACGAAAGTAATGTACCT
TGCAGTCATAGGACCTTCTACCAACATATTTGCAATTGTTCTCGCACTTT
TCTTTTCCGTCCGCGCATCTTTTGATGAAACGAGTTTTCTCTTCTTTACC
AAATTGATATTTATATGTTTGCGTCAGACAAACAGAATTTGGTTCTTGGC
ACGTTTGACGGTCATTTGATCGGCATGATGCTCCTTTGTGAGCTGAACAC
TGGTAGCATTCCAAGGTGAAAGCTAAATCATTAAAAATAATTTACCATTA
ATCAATTTCGAAAATATCCAAGATATTGGCAAAAAATATCGTGGTGTTAT
GAATTGCAGGGCTCTCAGACACGTCCTAATGTTACTAATCTTAATAATTT
TGGAGAAAATATACTTATTTTACTAATTATTGAGTATATTTTGCTATTTG
TTCTCATATTTCAACTATTTTTATTTAAATTATTTCCAAACATAGCTTGA
AACAACATTTTTCGCACCTTTAAAATCAAAAATTTTCTCCGTTGTTTCCC
AACGATTGTAGGCAGTGTCAAAATTTTGCAGAAATTCTTCATTATCGCCT
TTCTACTGTATGGGGCTTTACAACGCGATTTCCTCTTTAGAAAAATGAAA
CCAGGCAATATTGTGGAGATTGCTGAAAACTTAATTGTGCGATTTTTCTT
AATTTGTCAAAATTTTGACTGAGAGCATTGGAAGTGGGAATCATTTCCTC
ATCACAACAAACAAAACAACATGAACTAAAAAATAACTTTACAATTGAAA
GAGCTCCTAGCCGGGGAATTCCAGCACCATAGGGTTTAAGGTGGCCGGGA
CTGAGTCAGAGTAAAAAAAAAGAATGAAAGGAAACCATTTTTTTTCAATG
ATTATCTGCCAATGTTTCAAGCTTACCTTCTCCCACTATGCAACTGAAAC
AGAAAATGACAAGAATTTGAAAATTCATTTTGTTCTGGTCAATTCTGTTG
AACGTGAAAAAACCACAAATTGAGTAATAGTATTTCCTTTCAAGATGTTC
TTTTCTCGCCAAAAATATTTTCTGAAAACATATTTCTTTTTTCGTGAGTT
TTAAAGACATTAAACTAAATTTTTGATGGAGATTCCTTTTGTAAAGGACT
AGTCAATAATTTATAATGAAGTTTACAGGGATTCTTAAAAATAAATATAT
CTTGAAAAATATTCCTCATTGAATTTACAGTTCATTTTTCATCATTTTTC
ACTGATTACGTGATATATGATCGTCAGGAGGTGGATTTTTGATTGTTATC
GAATGAAAAGATCCAACTCCATAAACTTGTTGTTGACGTCGAGTCGTCGA
GAATTGTACCCTCTAGAGTCATTAGGCCGGTTGGCGGACGGTTTACGAGC
CAATTATTGAGAATTGTACCATCTAGAGGCATTAGGCCGGTTGGTGGACG
GTTCTCTACCTCAACAAATACAGGTCAGATTTTTTTTATAATCACTTGCT
GTCGTCATTAGACCATAATAATTAGAAAAATACTTTTTTTCTAGGTCTAA
ATTTAAAATCTGCTGCGTTAAAAAAAAATCATCAAATCGTATGATAGATT
ATTATGGACAGAGGATAGGAATTAAAAATGGGGTACTTAACTTTTTTTCA
GAAATCGGCCAAATGTCTATCAAAGTGTAGTATTTGATTGAGGGTTTTCT
GTCAGCAGCACGTGCCCTGACCCCTGCTGCTGGCACTAGGTTTGCAAGAT
GACAGAGAAGTCCGAGCTAAAGTTTGAAAATTGCTGGAGACCGAAATTTA
AAAATTTGTCTAAATTTTGACGTTTTCCCAAAATTTAATCCAAAATCATC
ACATTTTTGCATTGAGACTTTCCTTTGATTTTCCCAAATTTGGAGCCTTC
ATTAGAGACTTGATTGATTATTTCATTACATCCCTGCCTCTGTGACCTAG
TGGGATCCACCCCACTCGTCACCCCAGTGGAAAATATTCCCAAAAATGGC
CCATTTTTTCACCCCAGTAGATAAATCACTCACCCCACTGGAATCCTGTA
ACTGAAAATGACCCCTTCGAAAGATACGAAGAATCTGCACATACCCCACT
CAAAATTTTATGATTTTGACGTACCACAGTAGGATTCTCACATCAAAAGG
TTCACCCCACTAGAATCTTCCCTTCTCTTATCGAATCCACTTTTTGAATT
AACGAAATGCACAAAAAGGCTCAATTTTTTGCTCCCTTCGCTCGCAATCA
AAACTGTATAATTGTCCATATCACCGCGTCGTCAAAAGTAGTAGCAAATT
ATGATCTAAAGTGATAGTCTAGAATATATCCCATATGTATGAAAGTCCTT
ATCTTTAATAAAAAGGCAAGAGCAAAATGTTTTTCCGCTTTTCAGTCAAG
CTTTTCTCAAAAAATAGGTCGGCCATGGGTCGATCATTCAAGTTCGTAAA
TCAGAAGCGAAAATAATGATGACCTTCAGGTAGACTTGATGACTTGAGAA
AAATTGATGAATATGCAAGTTGCTGGGTTAAATAAAAATGAAGCATGAAA
ACTTTGATAGGACATAAATAGATTTTAATTTTAATTTATGCAGATAGTTC
TATTCAGTAGGGCAAAGTCTCCCGATTGGGAGACAATCCTGCATCAAACT
CTGTCGTGATACTGGCTGCGTGAATTTGCGCAAAAATATTCTTGCTTGGA
AAAGCTTATGAAAAATTTTAGTAGAATATTTTAAAATTTTGTCGGTCAAT
TTTAAATTCATTCAGTCAAAAGTTGATAAATTCATTTATCTATTTCCATT
GATCCATTTTTTAGCTTCCACTTTTGCCCGAATTTCCTCCTTTTTCACTT
TGTATGGATTGACGTTGTATGGACGTTGAATGAATGTTGCTCTTGCAAAA
TTGTTTCCCCTTCGGGAGGCGTCTCCCAAACGGGATTCGTCTCCCGATCG
AGGTATATTGCCCTATTGTTAGTAATGGATGATGTTTTGTGTTTTTATGA
TTAAAAGTCTTATACCTCACAGTTTCAACGCAGTTGAAAAATATATTCCC
TATCAGTAGCCTCAGATAGTGTAACAACAACTCCGCACTACATTTCATAA
TTTAACATTCGACTAGCACTGCTAGCTACTCTACCTCAGAATAAATTTTC
AGAAAGATTTTCTACACCCCAGTGATAATCAAGCAAAAATTGGTCACCCC
ACTCAATTTTTCGGGAAATATCTTGCACCCCAGTGAATTTCAGATTTTTC
ACATCCCACCCCACTGGATGTTTCACACCCACTGGGGCACAGAGACAGGG
GTGTTTCATTGTTTTTGACATCTGACAGTGTGAAAAAGGGACCCCTATGC
CTCGTACGTATTTTGTTTCAGTGCAGTCTCTGGCCCTTTCCCTTGAAGCA
TTCAATCCCGGAAAAAAGTGATCAGTTATGGTTATGGTTCGCGATTAAAA
GATGATGAAAGCCCAAGGTTCGGTAAAGAGATGGATCTTTTGGTCAATAA
TGGCCCCTTACAAGTCGCTTTTCCGTACCAAAGTCATAAAATGAACAAAC
TATTGTTTTTGACAGATAAACACAAGAGGCTTTAAGCAAAAAAAGTATGT
CGCTGGAGCCAGGGCTCCGAGAATGGCCGATTTAGCCCTTTTTACGCAAC
ATGTTTCCTTTAAGTTTGTTTTTTTGATGTTTTATTCGGATAGCTTTTTC
GACAGCTAGATCTCGAGTTAATCTCATTTGCAGATGTTTCAAAATCATGG
TGTTCTGAAATACTTTGACATGGAGCCACGAATAAAATCCATAAACTACC
CTGGATCAGTAACAATGGAAAAGCTTAATTTCGTTTACAAATTTCTTCCT
AAATAATTGAGAGTTCATACATTTTGAAAAATTGCACTTGTTTTGACTTT
GAGTTTTTACTTCAAGGAGTCGGGAATAATAGAGTGGAATTTTTTTTGCT
CATTCTAAAGAAGAATGTATTTAGAAACTTTTTTGAGAGGAAGTAAATTT
ATTAGGTCCAGCAATTTTTTTTATGGGGAAAAGACTGATGTCACAAGCAA
AAACCCTTGGGAACCGAAATGTGACGAAATTTCAAAGTCGCTAAAACGCA
AAACCACTTATACCATTGGAAAGCTCTCGAAAAACGAGATATGGCGGATA
TGGCGGATATGGTCGATTTCTCAACCTAACTCGAGAAAATTAACGTCAAA
CATTGAGAAAACGTCACTTTGGCACCGTTTTTCTCGAGAAAAAAATTCCA
TTCCGGAAATTGTTGTCACGGGTCCTAAAGAATGACCCCCTACTATAAGA
AACATCGCTTTTTACCATAAATCTACAAGGCCTCTACCCTCTAGAATCTC
ATTTCTTTACAAATCAACGTTCAAAATTATCAAATTTGGTTAAATTAGCC
TAAATTGGGCTTTTCCAGATATAGCCCGTACCCCCACCCCTGTTAAAGGA
GGTTCCTTTTTTTTATTATGTCTGTACTTGTTGGGGTTTTTGTTCAATTT
CAAATTATTTTGATTTTGGGGCGTGTGACAAGTTTGACTCAACAGGTACA
ATTGGGCATCTGAGTGGTTGGAAGAATACTAAAATTGAGTCAAGGGCTGA
GTCGCATATTTGACTTCAGTATACCTACAGTACCCTGAGTATCTTTATTA
TTAGGATTTATTATACACTGGATNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGCATGTGTCAATCTAATCACTGTAGAAAGAATC
AAAGATGAAGAGCAAATATTACCTTATTAATGTCTAGCAGACTGTATCAG
TATGCAGTTTAATATTTATAAATTCCCCAGAAACCTGCAAGTTTAATTGA
AGTGAGTTTCTTTCGAAAGAAATCTTTTACATGATCCCCAAATGTATATC
AGTAATTACTAAATTATTAATTATGGAAATGTCACTTTAATTGAATCGAA
ATAATAGACAGACTTTATGTTATGATTCTCTATCACTGACTCTTTTTAAA
AATCATTGATGATATTTTTTAGTTGTGTTTTCAACGACGGGAATAAAAAT
ATCAACTTTGAACTTCATTCAAGTTCTTGGATGGTCGTCATGGTTACTTT
TGTCTTCGTTGATTGCGCGCTGAATAGAATCTCGATTGGTCGGCACAGCG
TCGATATATGATTTCAACCTGTGCTTTTCACGGTATACCTACAGAGGTTC
AGCTGCGGTCTGACCTGTTTTTGATCATACTCCACATCTTATCCCCCTAT
TATTATTTTCTTAAGAATGGGACAGTTTTATTTTTTGATCGTCATATTTT
ATAGTCAAACAGTCCATTTCAACACTTTTACTCAGTAAACTTTCACGGAA
AAATGAACTGTAAATTCAATGAGGAATATTTTTCAAGATATATTTATTTT
CAAGAATCCCTGTAAACTTCATTATAAATTATTGACTAGTCCTTTACAAA
AGGAATCTCCATCAAAAATTTAGTTTAATGTCTTTAAAACTCACGAAAAA
AGAAATATGTTTTGAAAAACTTTTTCATCGATGAAAAAAAGAACATCAAT
TCAAATTTGAGAAGTAGCTTGAAAATTNACTCACGAAAAAAGAAATATGT
TTTGAAAAACTTTTTCATCGATGAAAAAAAGAACATCAATTCAAATTTGA
GAAGTTGCTTGAAAATTGAAACTAAGAAGAAATTATTGTACCCCTGAAAT
GGGCCTAGTAAACCTTTTACTACATTTATCAATAATATTTTTGGTTTTAT
CAGGTATGCCTAGCCCGTTAATCCTAAATATATCGGTTTTAGTCTTTAGC
TTTAGCTGTTTATGCTTTAGTTAAAGGTTTTGTTTTTAAGTAAGAGTGAT
ATCGTTTGCTTGCTCGTCACTTTTAATTCACAAGCTTTTTCACATTGAAT
TGACACGAATGTGGAGCAAGATTAGTCAGAAAAAGGAAAAGAGAAAAATT
TTTTTTTGCTTATATCAGCATAATATAACAAAAGGTAGACACTGTCCTGA
AATGAAATATGTGTCTGAAACGGGAACACTTATGTAAAAATAAAACCTTT
AGTGGTAAGTATAATAGTGGCTGTTATAATACTGGAAAAGCTTGGTTAAC
TTCAGAGCATGCTGTCGGCTTTCTTTTTTTCGTACGTGAAAATTATCTGC
AATGCAATAGATTTGGTTATTTTTGCGATCAAGAAAGAATTTCTAAGGGT
TTTTCCTTACTTCTCCGAAAACTTTAGTTGATTGTGCTAAAAAGATTAGT
CATGTTCACTTCCCTCTTTGTCATTTCAGCCACTCCGCCCTTGAAATGCC
ACTATTGCCATGACTACGAAGAAGAATGTCTTAAAACAAATGACGTCACC
TCATGCCCAGGCTCCCAATATTCATGCCTGCTCCACTATGAAGAAACCAA
AATTTTGAATGAGGATGGCAGATATGATTTCAGTCGAACGGTGACACAAG
ATTGCGTGGTCGAAAATCGAAATTATTGTGAGAATAGAATGAGATCGGAC
CCTGGGATTCTATCGTGTAAAGTGAGTAACACTAAGTTATTTTCAGATCA
ATGGAAAAAGAACTGTCAGATGAATTTTAATTCTCTCACAATATTTTGAA
GTGAGGGTTTTGTTTATTTGATTATAAGTTTTGTGGGGATAAAAATTTGA
TATGATTTTCCATTGGGGACAATATTTTGAAAAATTTTTAAACAGTTGGA
GAGGTCCCAATCAGGTCTGAAAATGGGGGTGTATTGAAAGTTTAACAGTC
ATGCACTATGTACTGAGATGACAACCATTGTATTTTCCTTTACAGGCTTA
CTGGTGTTACAAAGACTTGTGTAATTTCCCTGCATCTAAAGAAGAAAAGA
CACAGGAAGAAATTACCAGCAATATAAGTGACGAAGAAAGTAAAAGTGAA
AAGGAAAATTCTTCAAAAGGAATTATTGTTGATAAAAACAAGAAATTTGG
ACAGTTTACCAAATCAAAGGCTGAGATGTTGATGGCCACTAAGCTGGTGG
ATTGCTTGACAGTGATTATTGTTTATAAGTTGCTCGTTGTCCTTCTCTTC
AGGTAGTTTTTGATAATTGGATGTATGTCTTCAATATTTGTGTGCACTGT
ACGGTATAGGTACCATAGCAATGGCAACAACAATTTGAGAAGACAGAGAG
AAGATGAAAGTCAGGCAGATATGGATATTTGAAAACTATTTGAAAAGAAG
AAGGCTACCTAAGGAAAGAATTATCTAGGAATCGTAACCACCAGACTGGC
TTCCCTGTAAAATTTCTTGAACCATCTGCTCATGCAAAATTTAAAGATTC
TAGCAATGTGAATTTAGGAGCGGGACTACAAACAAATACTCTCCATTATT
ATTGACTTATGTCTTGTGCGATTTTCATGATGCAATGATTTTTCTATCAT
TGTGATATTTCATAGTATACAAAAGAAGAATTATTTTATTTAACAAAAAT
ATGTAAGAAATTTCTAATTGCATATTAGACAAGCTAAATTCTGTCCGAAC
CAAAGGTTGCCTCAACAGTCATCCATCGCTGTCTTTTCCTCTTCATAGGA
TGTACCTCTTATGACCAATAGATATTCGCATTCATTTACCCCCATAACCC
AGCAGATTCGAGGTCTTGTCTTTTATCCTCTTGAATTTCTACGATATTAA
AATGTCTTAAAGCCTCGTCTACATCGAGACGCAACTTCACTAAGCTTTCT
ACCATAGCTTTATTATCGCGTTCTAACAAATCCGAAATATCATTCGTTGT
CATTATTTCCGGATCCTGTCGAGGTTTCAGTTGGACTCGCTTACTATAAA
GTCTGACGTCATCAATGTCTCGCTTGCCCCATAACCCTTCACCAAGTTCT
TCCTGTCGTTTCCCCCAAAGACCAGCATCTTCGGTGTCTTGGTAAAGAGA
GTTTCTCTTTCCCCATCGTATAGGGTTTGCTTCATACCCTGGCTCGTATG
GTATTGAACGTTGATATTTGAGTGGATATGAGGGTCGTAGGTAGGGTTGT
GCGCTTGTTGTTGAAAAGAAGACAACCCCTAATGTCAGCAATGTACATAG
ATGTGTACTGAAAAAAAATAAAAGTCTGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069947TCONS_00069947Clytia hemisphaericatranscript
TCONS_00069946TCONS_00069946Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069946-proteinTCONS_00069946-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_511supercontigscaffold_511:58123..67202 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.18	0.22	0.24	0.34	0.7	0.49	1.46	1.72	0.94	0.9	1.15	0.62	1.75	1.58	0.06	0.03	1.58	1.57	2.56	3.14	2.82	3.03	1.33	1.43	2.73	3.72	2.72	2.35	0.09	0.09