XLOC_043393 (gene) - C. hemisphaerica

Overview
NameXLOC_043393
Unique NameXLOC_043393
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_506:117305..123533+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043393 ID=XLOC_043393|Name=XLOC_043393|organism=Clytia hemisphaerica|type=gene|length=6229bp|location=Sequence derived from alignment at scaffold_506:117305..123533+ (Clytia hemisphaerica)
TCTCAGAAAGAAAGTCTTAACGTCAGCACTTTTTAGATATCACTATATAT AAAGTTCAATAAATTGAAACGAATTTAAAACGTATTATGATTTGAAgaga agaaaatatcaaaaaaaaatttacacttcGAAAGAAGGGCTTTTTACATT CGTGGCAGAATACAGCATGTTTGAAAATGTTGCTTGGTGGATCCAGAACT AAAGCtgagatcaaaacaaaaaacaaagctGATTTCCGTTTGAAAAGGGT CGATATTACGACTCAGGAGTCTATTTCTCAAATCAAGTTTACATACGATG ATGAGAGTATTTGGTGCTATGGGCCCGATCGTGGAACAAAATCCAATCGA CCAATAATTCTATACGAGGGAGAATATTTAGTTCGAGTCAGCCATGAACG GCTTTATGATTACGCATGCGCTGGAGCATTGGTTGAGTTCGAAACAAACA AAGGGCGTGTGTTTCATTACACCCCTGGTAATTCATGGCGTGGATATGCA ACAGGCTGGGAAAGCGAGACAACAACAGTCAAAGTTGAAAACGGTATGGA AATCATCAGTTTGNATGCAACAGGCTGGAAAAGCGAGACAACAACAGTCA AAGTTGAAAACGGTATGGAAATCATCAGTTTGGTGATTAAGCGAGGCATT TTAATCGGTGTCGAGCAACAACCTATAGTTGAGAAAAATGAAGGACAAAC TAAACAAAAAGAATGGTACGTGAGTTGTTATTCTGCAGGGAAAGAAGACA TAGATCTCAATCATaaagattcaaaagaaaaaaatgaagaagttgTTTTC AAACATTTCGACACCAAAAAGGAAGCACTAAAACATTGGAATGAACTACA AAGATTggtgatgaagaaaaaagaaagaggagCCATGCTGGTTGATTGCT TATCAGTTAAGATTGTCAAACAGGCAGGATCGGAAGAGATTGTCAAGACA TGTAAAGAAAAAGCAATGGAGAAAGGATTCTACTCAAAAGATGAATCCAA CCAATCCATCTTCAAAATGATTTGGTTAATGTATTGCACCATAATGGATA CAagagatattttctttttcatcctTAGCATTTTACTGAAATCATTGAAT AATCTTCTCGATGTTCATTTGCAGTTCATTAAAGGTAGTATATTGGCTTT ACTGGTATCGACTTTCAACTCAGGACCACTTGAAGGTGACATTTATGTGA AATTGACATGCGATTATGTTTATGATTGTGATTCTGAAGACCCATTGAGT GTCGGTAGAGCCCTCTTACTTGCTGGATGTATCGTGAAATTTGCATCTAT CTTATTGGAGATTGGCGAGCTTTATATTGAGGAGAATTTAAACTCATGTC GTAAACTGCAGATGAAAAGGAACATTCTGGAGCATGTGAGCAAATTAGAT CAAGCATTTTATGATGTCCATTCAACCAGCCACGTCACTGAATCGATGAG TATTGAATCGATATATCATCTGGCTACAGAATCGATTCCCAACATGATTC AAACGGTTATAACAATCCTGTTGAACCTATTCTACATCATTAAGATTGAT CTCTACTTGGGTGGTTTCACAGTTTTCATCTCCACATTCAACACCACTTT CATTGTCCGTAAATTCATCACAAAACTCCAGAAATCTTATAAATTCGAAT GGAAATGGGATTCAGCGTTAAGTGACATTAAATCGAAATTCACTGataat ttaaaaacaacaaaaatgttttcatctGAAGGTAAACATTTGAATGAATA TGACCAAGTGAACAATGAGTGTGTATCAAGTCTGGAATCCAAAACTGTGG TTCTCTGCTTTTATgtcattttccaagaaatgaCTGGATTTATCGCTTTC GCTTTCAGCATATATGTCTTCTTAGGACATTTAAAAGAAGCAAAACTAAC GTCAGCTGAAATAACAAGTTTTTTCTTTCTGATGCAAACTTTCAGTAGTC ACTTTAATTGGTTTTTCTCCCAAGATGAGTATATTCGACAGGATATCAGA GATTTAGATAAATTCATTCGTTTGAAGAATCAAGTTCCTGGTATGATTGA TGGCGATGAAGTGATTGAAGATTTGAAAGGAGAAATTATTTTCGAAGATG TTGATTTCTCCTACCCTTCTCGTCCTTTGGAACCTGTTTTGAAGAAGTTC AATCTGAAAATACAACCCAATAAGATGACAGCTATCGTTGGTGACTCTGG TGCAGGTAAGCTTTTTAACCAAAaatcaatttatattttaacATTGTCTT CAATTTCAATCAAGCTTGAACCTTCTCTCTCAGTAACTCATTGGTTTAAA ATAGAACTGATCAAAATTACCAACTTTTTTCTAATCAACAGGTCCTTGAA TTAAGTTATTATGTATATCTCTATAGATAGCTACTGGATCAAATGTACCC AAGATTGCAGTAACTTACCTTGTCTATGAAAAATCAGGCACAACGTGCAC TGGGTTTTCAAAATAGCTTTAGAAGCAACCAAGAATGGATACTCGTGcca gaatttgaatttttcccTCATTCCTGTGTAACTATTTGGTTATATTTACT TATATATCTACTATTTTCCAGGTAAATCAACTATTGGCAATTTGATCATG CGATTATACGATCCAACTTCTGGGAAGATTACAGTCGATGGTCGAGATAT GAAATCACTGTGTCTTCAAAAACTTCATGAGAAAATGGGGATCGTAACAC AAAATCCTGATTTAATGGAAGGAACTTTAGAAGAAAATATCGGGTATGGT TCAGTCGAAGACTTTTGCAGTCGCAAAGACGTCGAGAGAGCTGCCCAGCT AGCTAAGTGTGATTTCATCGATAAATTTCGTTCAGGCTATGACACATATG CTGGAGGTTCAGGAATGCAGTTATCTGGTGGACAAAAACAAAGATTGGCC ATTGCACGTGCTATCATTCGAAATCCAAAGATATTGGTGTTAGATGAAGC AACTTCTTCATTAgatgctaaaaatgaaaaagaagttcAAGAAGCTCTTG AGAATGTGATGGATTCTCAAACAGTGGTTGTCATTGCGCATCGTTTGAGT ACCATTAAAAATGCTGATAATATCGTTTGCATGAAAGACGGTACAATTGT TGAGCAAGGTACCCATGATGAGTTGATGAAGACAAAAGGTacttattttg atttgatttccaAACAATTGGTTTCTGCAGAACAAACGAAAACAAGTGAT GAATCAGATAAGCACGAAAGTGGTTAGATTCGTCAATGATTTGATACGAG AACTTCGTAGCATATAAAATTTAACatatattgggctcttccagaaaaaa ttcgttcatggaggtggaggatatattattttgtctgtgatctacccctg gacatttcgatttttcaccccctggacacgtgttttacccctggacaagc atcaaattgaccccctggacacaatATTTACCCCTCGACATCGCAGATTC ACCCTatggacatggcagtttttcagggttttttcaatacccctggacaa tatatcctccaccccccatgaatggtttttttctggaagagcccatttca gGATTTTCTTTTACTATTTTGGAATATTTAATACTCCTAGATAAGCACGA GAGTTGTTGATATTACAACTTATTGGACAAACTCTATCAACCTTACTTAA AGTTTGTACATAGAACGTCAAATTATTATATTGGTCGATTTTATATAGTG ATAACTATTTAACCATATATTTTCGTCCCTAGCTAGTCTCTAAAAATTGT CTACAGGCTTTATCTACTTCCGGGGGATACTAGGTTTGTGAGGTGACAGG TATGTCCgggccaaaaatcaaaaattgacccttagagagaggaaaaattg gcgtttttggaACCCTTAGAAAGAGaactttctcaaaatttttatcgatt ttcactcgatttttgtccaaattttggaaaatcacgaCTCTTTGAGtgag gaaattttgaatttcgtgatttttagacccttacagagactcacttttct ttttaatggtttttgtacccctctTAGGAACTTTCGAGAGTGGGTAGAAG gaacccttatggctcgcacatacccagcacccattttgcctaagtatcca ACGGATCTACTTTCCGAATGTAGGAAATCAAGAATATGACCTCTTACATA TGTTTTGCCAATTGTACTCATTTATATTACACCTCATACGTGAGTTCCAC AAATAggttaccctctttgatttgatatttagGCAGtagtaaaaagattt ttccaaaattgtttccGAATCGTTCAAAGGGAATCCTGACTTAAATTTGG TGTattgctttttaattttacttcattggttcaaaagatatgttcaaaaa tctaaaatgaatgatgaaagtttttaaaaaaaaagacagaaaaaGGCGAA AAACGAGAGTATTATATTGATTGTAATAAATAGAGGCACAAAACGATTTT ATGCATCAGGAAATGTATTTCCATTATGTAAAAAGCACTTATTTACAAGA TTACGCATCCCTGTAAATACATTCCATCATCTGTGAATCGAGATGAGCTG CAACAGTTCAAACGAAGcatttttgtcaaaactttCACCTTCTCCACCTT TCTCAACGATGATGCACACACAGAAAAGCTTTTGGAAACTCTTGggaaga tgttgaaaattttgcggGGTTTGAAGCATTCGGCATCTTGTTTATGCCCA AGGGAAAAAcagaagtaaaaaaagacaatagagataaagaaaatataaag agtATTACAAGGAGCAAGAATTTATACTTTAATGTTTTGGTAAAAGAGAA GTCGTTTCTCTCATAAATTGATACCcttgtttttagccttttttgacatt ttttaaaattgacatttttggtttttgaacATAGCTTTTGAACCATTGAg gtaaaattaaaaagcaatacaccaaattttaagttaggatttcctctgaa tgattccgaaacaatttttgaaaaatctttttgctactgcctacaatatc aaatcaaagagggtaacttatctgtggcacacccggtaagATATGTAAGC AGCTCTTCTatccaattcaaaattttttcttattattttatAAGTATTGT AAATAATTACTGATATAGTCAAAGAGTGAAAAATAATTGCACTGATTAca aataataaacaaaatttACGATGTCAAACTTAACATGAACTAAACATTAA GgatgataaaattttgattacATGACTATTATAATGTGAAATGAATAACA TTGGCAAATAAAACTTGCCAtagaaattacaaaaatattaaaaagcccaa ttctgtaaaaatatttttgtacaatttACCATATCATTCAAAATCCctga tttttttgcaaagttttgatAGAGTCAATATCTCAATAGTTTTCACGGTG TTCACGGCCGTAGCGTGGTGGCCGATCGTTTTTGGACCAACCCCCCTCCT GGTGCGCCGAAAGACAAGGGGCACGAAAAGGCGCCTCTGATTACTAACTT CAGCGCCCAtttgcttttttacaccttagaattagcagttttcagcctaa aagAGAACGGATACCAAAAAATCCCTGATTGCTTCGGCTTCTTTTGCATA ATTTTTaccaatatattttattttgcatTAAAGGCCCTAAAATCCAAACT TACGAAAATTGCCTCCCTAGTTTGCCCTAACTTTAATCGAACCCATCACG CTACTGGTTCACAGCCAGCCGGCTTTGGTATCTAAGAAGAAACTGAGCAT TAGGAAGAGCGGGATTTCGATACGGGTACCCCTGGTTTATTGCGCTGTCG GCCTAGACGACTCAACCATCGCTCTTTGAAGGGATCGTTACCTGCATATC CGGGTGGATTTTCGGCTTTTTTTAAACAACAACACTTGATTTTCTAGACA TCTAGCtgttcgggctttataaatctgtgataCTGATACCAAACATCACC ATACGTCATAACAACGTTCATTGACACCTAAGATAGGGTTTGTTGGATAT AGAGTTTTGTATGTGCACTGAAGTCATCgtatttgaagaaaatgttaatg aaaatgcttccaATCCAAATCCATTCACTGATTTACTTCAATAATTCCCA TCCATTCAAATGTTCCTTCGTTCCTTCCTTCCTTCCTtccttcattcatt cattcattcattcaggGGAAGGTTTGATAACGCATTTACTCAAAGAAACG AAGCACTCTATCGTCTTTGAAGTAAACCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069688TCONS_00069688Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069688-proteinTCONS_00069688-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_506supercontigscaffold_506:117305..123533 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51 0.34 0.22 0.27 0.09 0.07 0.03 0.17 0.14 1.33 0.57 0.21 5.96 3.15 2.18 2.96 2.89 3.59 8.5 21.37 14.77 15.48 5.61 6.06 13.92 13.43 240 217.94 107.99 79.65