XLOC_043288 (gene) - C. hemisphaerica

Overview
NameXLOC_043288
Unique NameXLOC_043288
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_50:245292..249605+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043288 ID=XLOC_043288|Name=XLOC_043288|organism=Clytia hemisphaerica|type=gene|length=4314bp|location=Sequence derived from alignment at scaffold_50:245292..249605+ (Clytia hemisphaerica)
CCAAAATAtcgattcaattaaattgaaattgttaGAAACCTGTCTCAAAT
TAATGACACGATAAAATAATaagtttttgataattttgaaaaaaaaattg
ataccaAACAATAAGTATTTCATGCCTGGCTGAGTGCAATGTTAATTGTG
AAAATATTGGATATTCATTGGATGATCTCAAAGATGAACAATTCTTATTT
CTAAATGTTTTagacaaaaaaatgaaacttcgtGAAGGAGAACCTCCAGA
TTGGAATGATCACGAAAACTTTGGACCGTTGTTGCTAAAAGAGTTTGACC
ATCATCCTGGAGATAATGTCATTGATAAAGCAGTCTTTTTTGGCACTAAA
GGATTGATCGTTGGTAAGCCTTTACTTCTATTTCTACTCAAAGTGTAGCT
GAAAgctttcctgttttttttttacctccCTTGAATCCCTTTTCCTTTTA
CAGAGTCTTTCACAAAATGCAAAATTCCTTTGAAGGAAAAGATCTGACTG
cattcttcatttttaattttttaggcAGTCTTTATGGTGGCTTCCACGCT
GCAATCTTTGAACCAGCACTAGGAGTCAATGGATTAGGTTATGCTATGAG
ACACATAGCAACTTTCGGTGCTTTGACTGGTATGTACTCTCAAACAAAGC
TGCTTTCTTTAGATATAGAATTCGAGAAATCTTTAAATACCATTTATTGT
TTGTCCAGCCTTTTTATTGGTTTTTAACATAATTTGACGTGTTTGAAAGG
TTTTACTTAGAAAGTATTTAGAAGTTAAAatctttcgaattttttgaTCA
ATCAAATAAACAAGTGCTAAACCAAAAGAAAACTTACGCTATGATTAATA
CAAACTTACTGACCTCTGATTCGTAAAGAGAAACATGTAGATATTTCGTA
CAACCCGGTATTTCATCTCATTGATCGTTTTGACCATAATTTGTTCCTTC
TNAACTTTGTATTTAGCAAAATTACCAtttgtgaaaaaattattgggggg
ggcatagccccccccccttgcccccccagttgctacggcactggtTTAAA
TACCATTTATTGTTTGTCAGCCTTTTTATTGGTTTTTAACATAATTTGAC
GTGTTTGAAAGGTTTTACTACTTAGAAATTAGTGTTGGTTTAATTATCTT
TTGAATTTTATGATCGATCAAATGAACAAGTgctaaatcaaaaaaaaact
tacccTATGATTTATACAAACTTACTTACCTCAGAATCGTAAAGAGAAAC
ATGTAGATATTTCGTACAACCCGGTATTTCATCTCATTGCTCGTTTTGAC
CATAATTTGTTCCTTCTCTTTATACGTCAGGTGGTGCAGGTCTTGTGTTA
GGTGCAGGAATTCCCATTGCACAAGCTGTTCGAAAGAAGAATGACCCCAT
CGCTTGGATGTGGGGTGGATTTGCTGCTGGGGCCGTCTTCGCTCTCAAAA
GTAAGTCCTTTCACCAACTAAATTTCTAACCAGCTGACACCCCTTTTTAC
CCCTTGTTAAATGACAGGTCTCAGTGAGTTGATGAGAATTCTTAAGTTAA
GACATCATGAATAATTCAAAAGCGTTAATTGATATACCAGTCCAGATACA
AGTTTCCCAGAGATTCTGGGCCTTTTTCAAGGAACTTTACTAGCTTTACT
GTAAGGACTCGAAATTAAGTTTTCGTAGCACACCCAGTATAAAAACACCT
TGATTTTCGGGTAGGTATTTAAGTATAGAAAGCTTCgtaatttcatttca
atgtgTGTAAGAAGCTTTGGAGAGGTTTATGttgatttatgtaatttttg
GCAGGTTTTGATCATTTATTTTCGAGGAAAATAGCTAAGTAGAGTACTCC
TAATACGTTTTGGACAACAAAAGaagtgtttttcttaaagaaGAAATACT
AACCTACTAGTACAAATATTGTTCCACTTTTCAACAAATTTACACGATTT
CTTTCGTTTACCAAATGGTTTTAATCGTTTAAGAATCGTACCAATTTAAA
GTGATGTCAGGCTGAAACGTTATTAAacgattttaaacgtttttcttTGA
ACAAAAAGTGGTAAAacgatttgaaaagaaagtcttcAAGTTAAAACGAT
TTCCTAATTAATTAAACGAATTTGAAACTATCAAAACGAATTTGAAACTA
TCAAAACGAATTTCTTACCTCTAAAACGAATTTCTTACCTCTAAAACGAA
TATCTAAACTAGTAAACAAATATCTGAAATATTAAACGAATATCTAAACT
ATTAAACGATTACTAGCTAATAGCCAAGGCTTTTCAAATCCCCAACCATA
ATAAGCAAGGGATTTTCTACCTNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAA
CGATTTTGAGTACACCAAAACGATTCTGAGAACACCAGAACGATTTTGAG
AACACCAGAACGATTTTGAGtacaccaaaacgattttgagtaCACTTAAA
CGAAATGTGGATATTTAAAACGGTTGTaaacgattttcaaaatttaaaac
gaACGAAAACGAATTCCTTTTCATAGTTTGTCAGTCATCGTTTAGAAAAC
GatttttcttctaatttttgGCTACTAAATCGTTTCATACCTTTTCACTG
TACGATTTTTTCTCAAACGattaaaacaatatttgtacACGGTCCCTAAC
TCTAATATTTAACTTAAAGATCTATAATTTCTCAATAGAcatgtatattt
atttttgaagacccagttttttgtgaaaaaatctcattttgttcaaaaat
tcagGGTAGCTTGGGAAAATGATTTAAGGAAGCCTGTTTGAAGACTTTTA
TTGTGAGGATGCCTGTTTGAAGACTTTTATTGTGAATTCCTTAAACGTCC
TTTATAGTGAATAGCCAtaaccatttttcattttctgattCGTTTTTCTA
GAAAAATACTCGCTGATCTGAATTTCCTATTAAAGGAATCTTCTTTCCAT
GTCGCTGACCTTTTCACCCTTTTTGTGGTGAAGAAAATGGAGTTAATTTG
GACATGGACATTGTACATTTGAAGCAGTATATTTTGGTTTACTAACAAAA
TGTTGATGTTTCATTTCAGGTGGTCGCTTCGGACGAGCAATACAATACGG
ATCTGCTACTGGGTTGTTCTTAGCTTTCACCAAAACAATGGGCACTTATC
AACGCCCGTACGTCGACCCGTGGGCTAATTTACGGCAGCCGAAACCAGAC
ACGCTTCCTTTGTTCGATAAAGATGGTAACATGTATACACACAAAAGACA
AAGTGCACAGGATTTGTGAGAGTATCATCGTATCATCGTGtatcatatta
ttttttgtaaattcttaaattgaaataatgtttttaaaaccCTCAATCAT
CAATTATTAATTCAAAAGTTATTCAGTCGATGAAACGAAGCTCCTGAAAC
CATTTTCGATGTTTCAGAATACAGCAAAACCTCTAATTAGCAAACTATTT
TTCCCTGGTCGTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069455TCONS_00069455Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069455-proteinTCONS_00069455-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_50supercontigscaffold_50:245292..249605 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
223.09	217.95	297.54	325.11	191.93	155.77	169.72	179.74	190.04	165.69	131.14	140.67	120.38	130.5	132.4	128.04	261.89	259.33	99.35	88.41	187.55	180.61	137.7	125.76	190.21	183.42	123.94	105.31	91.02	74.54