XLOC_043060 (gene) - C. hemisphaerica

Overview
NameXLOC_043060
Unique NameXLOC_043060
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_493:223473..230173-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_043060 ID=XLOC_043060|Name=XLOC_043060|organism=Clytia hemisphaerica|type=gene|length=6701bp|location=Sequence derived from alignment at scaffold_493:223473..230173- (Clytia hemisphaerica)
AAATAACGATGAATTAAGATTTTTTTCATTTCGAGAAAATATCTTTAGTT CGTTGAAAAGACTTTTAGTAATGCAGATAAAGATGGATTATGGCTGATCA TCGGCACGATGTCATTTGGCCGTATATTGCGATTTTCATTTCTTCTCTTG TACTGTAAGTTTTTATTTTTCAAATTTAGATAAGGTCAACTTCATAACAG TTGCCTTACTACAATCGGCGCTGAAAAATTTGGCACAAAAGGGGAATTTC CTCAAAAGTTTAAAACCGCAAGTGATTTTTAAGTGCTTTGAAGTACGGTT CGAAAGTAGAGTTTTAACTCTGAGTTTTTACATTAGACTTAAGACCTACG AGGACCTTAGGATCTCATGATCTAAAAGCTCGAAAATGTTCCAGTAAAGC TGAGAATATAGCCTGGAAGCCACTTAACCCCTCCCAAATCGAAAAATCCA ATGAAACAAAGTGGAAGTACTGAAACTGCAATTCTCACCCAATTTTTAAA TTCTGAAAAACGTTAAAATACCCAAAGTTGCCGATATATTTCGGCGCCGA TTGTAGCGAAGATATACCCTTATTTCTATTTTTTGCCTTTTTTCGGAGGC AGTTTCTTTGCCCAGAAAACAGAAAATGAAATAGTCCAGACTGTACAATC TATCATTTAAGCCTTTTCCTTCAATGTTACAACTTTTCCTTACAGAAATT CGTTCAGTTGAGATAGAGATAACCTTTCCTTTCACATCTGGTTCATATGA AGAAATTTAAGATTAATTTGATACATCTTTGTGATTATCGGACTGTAATT CTTTTAAGAATGTTGTAATTCTTTGGTCAAACAAATTTTCGCGAAAAATA AAAACTTTTTTACTTTAGCGAATTCGAGGAAAAAACAAGTTCTTTTTTAC GAAGGTTTTGTTTTTAAGTAAGAGTGATATCGTTTGTCTCGTCAATTTTA ATTTACAAGCTCTTTTTCACGTTGAATTGACACGAATGTGGAGCAAGATT GGTCAGATAGAGGAATACAAAAACATTTTTTCGCTTATATCAGCATAATA TAACGAAAGGCAGACACGCAAAGTCTTTCAGATAAATTTTTGCTTCATTG AATTTAAAAAATGAAAAAGAAATTCAAAGTCTAAATTTTAACACTAATTT TCAATATTTTTATTGTCATAGATCAAAACTACAATCTAAAATGTATTGTA AATGGGATTGGTAATGGAAAAACAATTGAAAAATATGCCCAACGTGGTGT GCCTTTCAGATTGGAATGTGATTTTGACGAGGGTGATCATTTGGTATATT TTGATAAAGTTGACCCAAAAACAAGCGAGGTATGATTTTTCTTTTAATTT CATATTTTGAAAAACAATATTAAACTGTAAACATTATCTGAGTTTTCGAA GATTATAGTTCTTTGGTCTGAATGAGCCCCCCCCCCCCCCNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTGGACCTTCAA TTCGCAAATTCACGCATGGCAATGTTTTTTCGCAATTCACGCATGGCAAT GTTTTTTCGCAATTCACGCAATTTTTGTTCACGTAAAGTTTTCCAATTCA CGCATTCACACAAACCGCTGCCCCCCCCCTGAATTGCACACTTCTATAAA ATTATAAGTAATTTAATAAAATGAAAGGAGCACAAATATGTTAGCAGTCA AGTGATTTTTGCAATTCAAATTAATTCGTCCGAAATAGATTTCCTTCACT CGGTCATACTTCTAGAACCAATTTCATTTTACTTTTCTGATCTAAAGGCA AAGCCAAGTTTTTCCTTGTGTTCCTCTGGATCAGTATGAAGAAAATTTCT ACAGCGGGAAATAAAAGCGAGGGAGTTCCGTCCATCTTCGCCAGTTAGTA CCACTTTCTAAGGCATTTTTTGAGCCTGCGAAGTCGTAAATTATTCTCAA AGCTTTGTGTCATATTTACTATGTTCTTTTTAAAAATGTGTATTCATCTT TTCTTTTAGGAACTCCATCCTGGTACATGGGTGAACCCATACAATCGTTT GTATACCTATAAAAGGACAAATATAGCACGTCTTGATGTTGCCAGGCCAA CTCTTGAGCATGAAGGGCACTATAGGTGTAAAACACAAAGGAATAATTTC ACTGCAGGATTTAATGTACAAATCAAGTGTAAGTTCCATTATTCATGCAA AGGGACCTCATTTTCACCATCATTGTCCAGTTGGCAATTGTCACAATCTT CATTCGCTTTCGTGCATCCCTTTCTGCTTCCGTGTGGAAACCATATCAGC GTAATTAGATTACAGTTGAACTCATGTAATTCGAACTCCTATAACTCGAA AACTCACTTAAATTCGAACAGATTATGTGGTCCCCTCAGAATTTACCTTG AAAACCTTACAAGAAAACTCCTATAATTCGAACCCATGTAATTCGAAAAA TCATGCAAATCGAACAGATATTCCGGTCCCATCAAGAAATTTTAATCATG TAATTCGAAATTTTCGATTTTTTTAAGTTTTTGAAGCTGACAAACTCAAA AATTTTATCAATCGAACGTTTTCAATTAAACGTTTTTGATGGTAGAATTA TTGTTTACCAATCTAATGTTTTCTTTTTTACATTCGTTTGGAGCTCTCCG TGACTTGGAGGATGGTATGTCCAATAAAGACGCATCTATAAGTACGAATA CAAAAAATTGTTCAAAAGTAAACCTGGGAAAGACTTTTTTTATCGAATTA GGTCAAAAATACAAAAACTCATCTATTTCGAAACTCATGTAATTCGAACA AAATTTTCGGTCCCTTGAGAATTCGAATTACATGAGTTCAACTGTAATTC TCTTTTAAAAGTGGTTTCCACACGGTGGCTAGCACGAAAGGTGTTCGCAC TTAAAGGGACATAAAAGTACTGACGCAATTTGTAATAAAGCTGTATGCTA AAACTGTATGCAGCGGGATACAAAATTAAAACAAATGTCACATGTCAAAA TAAAAAAATCAAAACAAATATGGCTGACTTTGAATATTTAAATTGTTTTA CAAGTTTGTTTTGGACATGTTATTTTAATTGTTCTCTGTAATGACAAGTG GTTCATGCAATTTTACAATTTACTACTTTTATGCCCCTTTAAAACAAATG ATCTTTAAAATATTGGTTCGTAAATTCAACCAAAAAGGGTGTTGATTAGG TACTTGAGGTACGGTACGGTATGAATTCACTATTTTATAGAAAGAAAAAT CATGAAGCCTGTGATATCCCCCTGTAGTGATATCCGATGGAGGGGGTACT AGGGTCGATATATGATTTCGGGCTGTGCTTTTCACGGTAGTGGAGCAGAC CTCTGAAAATCGACCTTTACCTGTTCTTTGCATTGAATTTCTTACATTTC CACATAATATTGAGGTTAAGCATACCAGGATAATCACGACGACGGATGAA AAATGTAATAGGCTAGTGAAAATACGAAATTTGATTGGTTGAAACTCACT AGCCTGTTAAATTTTCGTTCGTCGTCGTCATTTTACCGATTTACTTGACT TCACTAATATCTATGTATACTTTTTGACATTAATTTCCAGATGAAGTTGG CAATTATAAAAAAGAGCAAGCTTTCTTCACAAACACAAAGAAAAATCAAA TTTCCATTGGTATAACTGGAACTCAGCCACAAGTTGCATGGTTCAAATAT GATAAAGCTGGTACTAAGAAAAAAGAAATCGCTAATTCTAACAGTAAGAA GAAACACCTTTCATTTTTTTATGGCGTTTTAAAGGCTATAGCGCTATACT TATAGTAGGGGTCGGATTTGGTGGCACTTCCATGGCTTCCATGGTACACT CTGAAATGCATGCTGATGTCAGCCCGAAAGCTGATTGGCTTAAACGACAG TTATACGAGGTTTAAGAGTATAGCTAAAACTTTGTTATGTTTTCAACAGT AAACGAAAGTGAATGAAGACAAAATGTAAACAAAAAGATTGCAAAGAAGT TTTCGAATAAATTCACAATAGAATGTCTTCATTTAAAATTTACCATGCGT CGTTCCCTTTAAGCAATCTCAGAAAATGATTGTTATGCCTATTAACAAAA AAAAAGTAAAGACGAAAAATAAAATTTTGTTCATTCTTGACGTTTCGATA CTTCTTGTATCATGATGACAAGCAAATAGTTAGCTTACAAGCAAAAAAAT TTTATGTTATGCCTATGCTTGTTTTTTGTGCACCAAGTTTGATAATTAAC CCATCAAAATTTTAAAGTTTACCTTTCCTACTCGATGGTGATTTGGAATT TATAGCCCCAAGTTTCATTGTAATATTTTAAAATGTTTTCATTGAAATAT GAGAGACTATTCAACCCGAAATCACCCGAAAAGTCGGTAAAAACCACTGT CTGGAAGTCTACATTGATGATTTACTATCAACTTAATACAGACAAACCGT CGAAACGTCGCATATACGCAACTGTGTTTTTAAAGTTTAATTATAATGTT CAACACAGATCTTCATTGACTTTTACGTGTTTTTAATGATATACTGTACG TAGGTTTTTCAACCGACTTGAAAACCCAACTCGCTGGAAAGGTTTAATTT TTGATCACGCGATCAAAGAAAGAGCGAAAACTAATCAATTTTTAAACGCA AGTCAGTCCCAGTTGTTACTACAGTAACTACTAAGTAGCAAAAAAGCTTC CTCAGTCCAGGGTGTTTTTTATGCGGCCTTTGCTTTCAATAATATACGAT AAAAATTCAAAATTAAAAGAAATCATGTGTCGCGAGCACAGAGCTGTGAT TTCCCTATCAAGGGTTATTAAACTCTCCCGGGATAGGGCCCGGTCCGATG ATATCGGAGGGTCCNTAGGGTTATTAAACTATCCCGGGATAGGGCCCGGT CCGATGATATCGGAGGGTCCGCTTCCCTCTTCTCTCTCACAATAAGTTCC TTCATGGTAGCTGCGTTTTTTTCCGTTCTAGGTGTTTCGAACTCATCCAA ATATTATGTTGACATTACAAATGGTAATTTGATGGTGAATGATATCAAGA AAAACGACACTGGTACTTTCGAATATCTATTAACTAAGAAACCTTACAAT CCTAAAACGGACAAGATCAAAGTCATTTTACAAGGTAAATATTGTCTAAT CTAAATAAGTTTACGTTTATCGACCCAGTGATATTCATATTGGAAGTTTA TCGTGGCTTGGATCACAAGACTTACGTTTGGCTACGTTTCGAGAGATTCT TCTCCCATCATCGGGCAATGTGGAGGATGTTAAATATTGTCTTTTCTTTT ACTTCTCTTACACCGGTTTCTAAGCTAAAAACACGGTAAAATAATTCGGC AAGACGATTTTAAAAATTTGATTTAACTTTTGGAATCCATTTTGATATAC TGATTGCTTTTTTCCAAAACTTTGGAAGTATTTTCAATTTTTTTTGAGGA ATTTATTTTCCTTAAAAATTTCCAATTTTGAGCTTTAAAATGATTTTATG TGATTATCTGAAACTATTAAAAAACTTTGGTCAAAACCCTCTTAGAGTGC ATTTCTTTTACCAGACTTACCTAGCTTTACTAACTGAGGGGACATAATCT AATTTTAGTGGACAAGGCAATCGTCAAAAGTTTGAACCAAAATGAAGACC TTGCACTGCCTTACCTTGTTTGTGCTTTCATAAAAATATCCATAATGGCA CACTTGGTCTCACTTGTTTACAGTTTATAGCTTTCGATTTTTGTGCTCCC GTTTTGAGAATCGGGAAATGCAGTGTCAGCATAACTGACAATGTGAATGG AACGAAAACTTGGCTATCGAAAAAATGGCAGATAACTAACTGAACGGATT GAGAAAATTGCTGGGTCAGTCAGTTAGCTCAGATAGATAGAAAACTAAAC GGAGTGATGACGGGTTTAGTCATACTTTTTCACCCGCTCATAATTAGGAA TGTCTGGTAAAAGTAATCCATTCACAGTATATTTCAACGTTTAACATTCA ACATATGAAAAAGAGCAAGAAAACAAAAACAAATAATTTCAAATTTTGAA AATCCGAAAATGGTAACGCCGGATTTATATCGTTATAGGTAAAAGATGGA TTACTAGTAAAAAGATTTGAACAGATTTCAAAGGCCCATTACTGTATGAT TCTTAAAAATACCTTAAAGTTTTGCAAATTTGAGCCTTGTCATTCTCATA AAAAATTTTTTTTAAGTTTTTTCCAACTACAGAGACAATCGAATCTATTT TTTGAGTAACTTTGTCCGTAAAACAACAACTTGATTTGGTCTTGTCTTTT ATCATAAACTCCATTCGTAAAATTTACAACCATGATTAATGTTGATTATC TGAAAAGTGATCCCGGGATAAACAGATTTACATATCTTTCTTTTTTCAGA AAAAACAGAAGTACTTATTCCAAGATTCAAAATAGTGGTCGAAGACAAAA A
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00069101TCONS_00069101Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00069101-proteinTCONS_00069101-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_493supercontigscaffold_493:223473..230173 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.3 1.81 1.21 1.06 0.3 0.18 0.43 1.02 0.28 0.18 0.97 0.04 0.07 0.27 0.19 0.48 0.08 0.22 0.54 0.25 0.33 0.08 0.58 0.76 0.24 0.27 0.23 0 0.38 0.32