XLOC_042527 (gene) - C. hemisphaerica

Overview
NameXLOC_042527
Unique NameXLOC_042527
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_48:302624..309696+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042527 ID=XLOC_042527|Name=XLOC_042527|organism=Clytia hemisphaerica|type=gene|length=7073bp|location=Sequence derived from alignment at scaffold_48:302624..309696+ (Clytia hemisphaerica)
attttaaggggaaaatgaagaaaaataaaaaaattcatgtaaaaGTAGAA TAGTATGGTTTTCCATCACTTCACAAGCATGGTTGGTGTGATTGAAGAAC AAACGACACGTGATAAGGATGTTGATGGACGCCATAGCCATTTGAAAGCC GAGAAGAAATTTCTTTCCAATCTTGATAAACATATCAATAAAAACATGGA AGAGGATACCATTAATCCCACNCGAAAAGAAATTCCTTTCCAATCTTGAT AAACATATCAATAAAAACATGGAAGAGGATACCATTAATCCCACAGAGAA AATAGGTACTCCCCTCTCCCTGCTATATCATTGCTATTCGTCAGCCAGAA TTTTGAACGAACTTTTCGTCAGTCAAACAAAACTCAAATACGCCAGAACG TTAGTTATTATAAAGCTGAATGCCATCTTTAACAACGTGATGTTAAAAAT CCTAtactttctaaatttttattttagagaaCTTGAACCGAATCACTGGT TTTGGGATCGGTGTGGGAAGGTAGGAATGttaaattcttgagaaaaactg TAAATTGTACCGATATAAGAATAAAGCTTTGGAGTTTGACATGACTTTTT TTGTCAACTTATATTGACTCTCAGAATAAAATTACTTTGACACCTTATaa tctttgacaaattttgttcaaaaagaacaaaaagatcAAAAGGTGCTACA GAAATTCCCTTCCTCCCTCCTTAtgctgaaccgcccctaaagaCCTAGTA ACACGGCCAAGTGCGTAAGCTAACGAATATTTAAAATGCAACTCAACTAA ATCTCactcacttttttttatttcagtttatATTTACAAGAAGCACTTGG TTATCCATTTCTTGTTCTCCAAAGACAATGTNATACTACAGTTTATATTT ACAAGAAGCACTTGGTTATCCATTTCTTGTTCTCCAAAGACAATGTCAAG TAATTTGTTTTTTCTCTcgttaatttctttttcttcgtcAATGTTTCTTA GAATCATTCAATGATCAAATATGACCAAAAGATCAAACAAAATCACTAAC ATATTTGCACGATagcaaaaaattaataaaataagcTGATAGCAAGTTTA CTCTAGCTGAAagtaaaaaacacattttttctaGTTCCATGAATACAATC TTTTGAAAGAGGAAGTAAAAAAGTTTTACCTGTTGATACATCTTGTTTTT GTAGGTAAACAACGCTTCTTTGAAATACCACGTCCAACCATTCTCTTTGT TTCCAGTCATCAACAAAATGCATCAGCGACAGGTAAGCACATGGTTTTGA TCAGGTTTCCATACTGTATGATATTACTTACAAAATGTAGTATTTTTGAA CGATGCTCCATCTCTGTCTTAAAAACTTTTCCTTGGTCTATTATGAAGTC TGTTTTGTATTTGCATTCTTCATTAACTTTTCATTAcgaaaaaattacga aaaaccCATTTAGGCTTTCAGCTGTTTTAGGCTTGTTTGCTTTgattatc aaaaaatttcaatattccaaaaaattGTACTACTTTAGAAAGACTTATGG ACCAAATATGAGCTCCCTGTGttctcttaacttttttttcaaaataattg caCTACCTCTAATACTTAACTCTACGCTACGGTGTGAAAGTAAAGAATCT CAGcttgattctttcttttttaaacaGTGACGACAATTTTTGAGAAAGCG AAAAAAAGGATAGACAACATCTAGGGAAGAATATTTTTCTAGGTTAGAAG GGACTTTCCACACAATGTATCCATGGTAACAACAACCGAGATATATCCTC GGGATACGAGGAAAAAATAACATAATTatcatcattttttttgtccaaaa aaattgTTCACTTAAAATCATTGCAAAAATTACTCCCATTGTTTTCCCAA TTTTCCAGAATATCGGTGCATTTTGGAAAGGATGGGGAAGTTCTGGACTT GTCAAGGGACTGACTATTGGAacagaaatcgtcatttttgaaCTGTGCAA TGTTCCAAGGTACGCCACTTTTCATTCATGGTCGAACTTATTCTCAATTT CCCTTGAGCTACAATATGAGAATATGTTTTTGTGCGTGCGTGTCTGTGTG TTTGTCCCTCAAAACTTTTGGTAGCCTAGAAAACTTAGTCTTAGTCAAAA GTAGTCTTATTTGGCTAAAGTTTAGCACGCTTGGGTTATCTTGGGGATTt ttcattttacaaaaattttgatttttgtgaccTTGGAGCGGGCTTTCGAG ACAAAACGAGACTAAAAATCTTACGGGCAGCCTGGAAACTGTATTACGGT GTAACGGTATTATTTGACTGCAATTTAGCACACACTTGATAATCGATCCT GACTTTTTACAATCAAGTCTTCAAATAATTTAGATACAGTAAAGCTATTG AAGCTGAACCATTGATTAATTTCGATTAAGTTGTAAGACACACTTAGACG TCGGTAGAGCTTTTTTCCAATGTAGGTTAGTTgagatttttggacctacc ccggtggaggtcctttaaattaacctctgtccgttccTCCGtacgtccgt ccgttcgttatcaacttttctcgagattggctctttcattcttcatgatt ttttttcacaaagatgcataactataaaccctcgaatgtgacggagcccg attttagaaaaataatgtttttgggcaaatttaggccaaaaaatggctaa aaaacggtttttttttggactttgtgaaatattgttttttacattgatga ttttttacatgaaagtaggtaaaagatggttcaagtaaatttttgtaaaa aaagaatttttcagctcaaaaaacgcatctttatctataagaatcactat taataagcatacagcaatgttcttagccaaattactaaattttttgatga gataaatgtttttttgctcacgaagtcttgaatatgaaagaatatttcaa gagcatgaaattttagtttctaaacgttttaataagaaacaaacgactat tttaatagatcgtcactatttgtgttctgaatggttgtttcacaggaaaa aataatcaaataccaAGGTTCGGGAAATATATGAAAACATATGTGGAAAA TGCTATATTTACCTAACTGATCACTAACTAGGGATCGTGCTAACTGTTGG GATTCGGGATATCACTAACACATTATCCGGATTTAGATTAATGGTAAACA TGATCTGGATGTTTGTTTTAACTAACtggtgaaattgaaatttcaccATC AAGAAAATGCTATTcccgaattttcaaaataaagatcagtttGTGTTTCT CTTGAAAACATCATTCACGAATTAAATCCTGATTTATagaaagctggtaa aataattaaatgtattcgatcattcTGTGATCATTGGTTCGATAGCTCTC CTTCGTTCTGacatgtacttgcgctactttgggaatcccggcacttttgt cacaacaggggagctgcactagagagccaacttaatgacctcaaacccgt ctcaccgatgcactgagcccttgcgacgcaaatccattgcgaacgaatga ggccgccctggcgggacgcctcacctttagcgttgtgttacacactgatc gaatACACCCTTATAATGGTTTGCTTTACATANNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNTGTGacagtttaaaatttttgattgaatt gtcttatttgaaggtttgaaaaataagttctgatttaattaattgtttaa aggatacactcaaattaaagagatcgggaaatcgaatTTCCCAATTTGGG AAATTTTATTTCCCTAATTCGAGAAATCACATTTCCCGATCCAGAGAAAG AATAGAATAAAGCAAGCAAGGTCACAATTCGTAATTACCAAATTACTAAA CTTGTGAATTTGTGTTTTCGGATAGGTTTCCATTTCCGATGTAATCTATT TTTCACGAtgtgatttctaatttttcctaGTTNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCATTTAGAAAGAATTTT AGCGGTTGGTGTTATTTTGTTTCCCTACCTTGGTCAcaacttttacctat ttcaaaaattttaagtttatgaTTTAGGTTTTGCCATAGTAGAGGATTTT ATTGATCCCGAATATGCCAAACAGatttgggaaattatttccAGATGGTA AAAACAAATACCCAATGCTCCAAAGAATCCCAAATTAACATTCCCTAATC CTAAAAGAAATGGGTTGAAATTCCCAatctgtttttcaattttcactagt ttgggatttaaagattttttcctgtgtttaactacggtcatgctcacgta gatatcaattatatatgtgttaaatgcataacctgGTGAGTCCATAAAAT TATCACTTGTTCTGTGTAATgtttccagaaaaatattatgACAGATTAGT AGGGCGTTGGTGCTACCTGCTGGATTGCTAACGATCTTTGATTAATTTAG ATAACTTCTATAAACCAGTTAAATTGGTCACGTATTTTATTCTGTTCTAG AGAAGAGACGAAACAAGAAGATGATAAGAAAGGGATGATTATCCACGAAA CATTGAAAGGGTAAGGTGTTTATTATCTTCGTTGGGTGTTATTCTTACCA CGTGACATGTATTGTATTTGCCATCCGACTCTTACGACTTTAAGAGGGAC TGACAAAGCTGACTGAGGAAACCTCGAAAAATCAGatgattcaattttta aagcaaatactttgacaattttctttttcttctatcTTTTGTAGAGTCAG TTTGTTGATGACGCTCCCTTTCTTCTCTGCAAGTCTCATCGATACTGTGC AGGTAAGATACATTTTGTATGGAGAGTATTTATTCATTCCCATAAAAGGA TAACGGATAATAGCGAAAGAACCATCCTCCATCATTTACTCTGAGTGCCT TCTATAAACGCCACCTGTAACGAGGGTTTTTAATTCCATTCGCgtcaaag agaaaaaattgcTGCGTGTGGCAAGTTCAAAGAGACTATTCACCAAAATT TATACCAAGAATTTAGTGGAAGCTCGCTCTTAGCTCGCAATCAAATCGAC AATTTCGTCGGACAGCACGTTGATAAGAATTTTTGCGCGAACATCATTTT AGTGAGGACACGAATAATTTGTTCTGTTTTCTTCACTGCAGACACTTGTT CTTGGTGAGCCGCGTTCCATCCTGACTTTCTTCAAAGATGCGTTCTATCG ATTGATTGGCTGGTACACATCACGTGGTCATGGACGTCTTATATCATTCT ACTCGTTGGTATTACCGAGCATTTTATACGGTGTTTTGCGCTACTCCGTC AAAGTATTTCTATCTTCATACATACTAGCCATTCGGTCTCCTACAAAGGT TGAGACGAACAATGAACAAGAATCAACGGCCAGTATGAGAGCTTTATACT ACGCTGAACTTTCGTCAAATTTCATGGCCTCCTTGCTTACAGATGTCATG TTGTTTCCTTTGGAAACGGTGTTTCTACGGCTTCACTTGCAAGGAACGCG TACTATAATTGACGATACGGATAAAGGGTATGGTGTAGTACCACTGTGCA CCTCGTATGATGGTGTAACGGATTGTTTTAATACCATTCAAAGACAGGAA GGGTTTTCCGGGTTTTATAAAGGCTTCGGCGCCCTATGTTTACAATACTT TGTGCAATTTATAATCCTGAAAGGTGCAAAGATATTTTATTCCGGTGTGT GAAAAATATTGGACCTTTGATTACTCGGAACCAGACCTCTCTCGCCGTGA AGTAATATTTCGATaatggaaaaattcaaattagatGAAAATGTATCATA GGCTTGTATGAATAATTGATTGTAGAATtcaaaattagattttaaattGC TTTTTGGTTGTCTTTTGATGTAGCGTCCATTAACCCTATAAGTGTCACGG tcattttttctaagttttttaaagaaaatcgctagttcaaactttaaagg cttatatctccggatctagaagNTGGACGTCTTATATCATTCTACTCGTT GGTATTACCGAGCATTTTATACGGTGTTTTGCGCTACTCCGTCAAAGTAT TTCTATCTTCATACATACTAGCCATTCGGTCTCCTACAAAGGTTGAGACG AACAATGAACAAGAATCAACGGCCAGTATGAGAGCTTTATACTACGCTGA ACTTTCGTCAAATTTCATGGCCTCCTTGCTTACAGATGCCATGTTGTTTC CTTTGGAAACAGTGTTTCTACGGCTTCACTTGCAAGGAACGCGTACTATA ATTGACGATACGGATAAAGGGTATGGTGTAGTACCACTCTGCACCTCGTA TGATGGTGTAACGGATTGTTTTAATACCATTCAAAGACAGGAAGGGTTTT CCGGGTTTTATAAAGGCTTCGGTGCCCTATGTTTACAATACTTTGTGCAA TTTATAATCCTGAAAGGTGCAAAGATATTTTACTCCGGTGTGTGAAAAAT ATTGGACCTTTGATTACTCGGAACCAGACCTCTCTCGCCGTGaagtaata ttttgataatggaaaaattcaaattagatGAAAATGTATCATAGGCTTGT ATGAATAATTGATTGTAGAATtcaaaattagattttaaattaatttattg ttgtcTTTTGATGTAGCGTGTCATTAATAAGTaatgaaatattttcagca acATACACCTAGATGGCTTGCGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068127TCONS_00068127Clytia hemisphaericatranscript
TCONS_00068128TCONS_00068128Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068127-proteinTCONS_00068127-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_48supercontigscaffold_48:302624..309696 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
SLC25A46solute carrier family 25 member 46 isoform 1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
83.96 95.14 86.03 96.28 41.06 29.93 54.73 45.19 60.29 49.37 52.42 55.33 43.45 49.21 47 48.46 58.81 69.83 31.43 34.86 49.74 44.34 69.15 70.88 45.71 50.71 47.43 51.05 61.69 56.5