XLOC_042479 (gene) - C. hemisphaerica

Overview
NameXLOC_042479
Unique NameXLOC_042479
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_478:578892..582297-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042479 ID=XLOC_042479|Name=XLOC_042479|organism=Clytia hemisphaerica|type=gene|length=3406bp|location=Sequence derived from alignment at scaffold_478:578892..582297- (Clytia hemisphaerica)
ATAGCTTTCAGGACCGGAGTTGGATCGTGAACGTCCAAAAGATGTCGAAA
CGATGTTCGATAAAGTCCGTGATTTTTACATCGATTCCAATACAACCAAT
GTTTTACCAGAGTAAGCTCTTCCCTTTTAACGTTGTTTGAAATGAGCTGA
TATATTACTTTGGTAAAAAATATTTATTGGCAAAAATCTTTATTGGCAAC
AATTTTCACCGGCTAAAACTTCGTCGGTAAAAATCTTCGTTACCCAACGA
TATTTTTTCGTCACTTGTTTTTAATTAAATTTTACCGACAAAGGAGAAAA
CTTTTTAAATTCATAACCTATATGCTGCTATCTACTATGTACATCTGAAA
TGTCCAAGGTTCAAACTCGTTTCTTTTCATATAGAGAAGTGAGGAAAAGC
ATCTGGGCTGTATACAAATTACATACAAGAGACTGGGACCGAAGTACGTC
TCCTGTTTCACCGATCCCCACATCACCCCGATTCCCGACATACCCCAAAA
ATAATGTAAGTAGATATGCGGTTTATTTTGTTACGCTTGAATTTAAAGTA
AACTTTGCTTTCTAACTAGCCCGGGCTCCACTTAAGTAAGGCTTCTTAAT
AGACCGCATCAAGCAGAGAAGTGTCACAACCTTGCGCACCGTAGCCGAAT
GTTGGACCTTTATGTTGGACCTTAATTATAACTGGACTTGAGGAAGTAAA
TCTTAAAATCAAATATCACCCTATTATATTTACAGAACTTATTCATTACC
TATTAAATAATGGAATTTTGTCTTGAATTTTTTCAGGTATGGATAAATCC
GAAATTGCTGGAGGAAAGAAATCGAAAACTTAGCTCCGGATCTACAGTTG
GTAAGAAAAGTGAATTCTCAATTCCAAAAACAAGTATGGGAAATTAAACC
TCAAAGTGTAAGGAGATGCTAAAACAAAAAGCGTCTGCGCAGTAACGTCA
ATTCTACAAAACATTCGATTTTTGACGTCACTTTAAACTTTCGAGCTCTT
GCAGTAGGAAAAAATTGAAATGCGCCAAAACACTTTGAAAGGTTTCTTTT
TTGAGAAAATATCGAAGTGTAACTCACCAAGAAACGGAATGAAAAAATCC
CAGTGTTTAGTGAGGTACTCGCTTCTACCTAGGTTGAAATCCTCATTATC
TTTTACGTGACTTCATCATCGTTAAGCTCTAGTTTAGACGGCGCCCTTTT
TGCCCTGCCTATTCTAATTGTGAATTAAATTTGGCATAAAGTTGGCTGTC
TAAAGTCAATGCATAGCCCTCTTTTGACGTCAATGCAATGTCTTCTTTCA
ACCTTTTCCAAGCGAAGAAGTGGGCCGTCTAAACTAGAGCTCAGAGACTT
GAATTATGAATGTAACTTACGTACCCTTAAGGGAACATTTTTTTATTATC
AACTAAATCACCATTTAGCTCACTCATATTCTTTCTAATGAATTTGCAAA
CTGTCTTTTCTGTGAACTATTACTTAATACTCGTATTTTTGTCAGATTGG
AATGATTTTTACATGGGAGACGATTCCGAATTGGCAGGTTTCCATAGCGA
CGGTGGACAATATCATGACCAAGGGTACGTTTTTTTTCAAAGTTTCTGTA
CCAAAGTGCTTCTTTTACCATCTAGACGGAGGCCAAAAGTAATTTCTTTT
TAGTAGGTTGAATACACCTCCTTCTCACAGACCTGGTAGGAGTTTTTCAG
TCAATGGGAGTAAAAATAACGGACCTGAACTTGATAGGGATCGATACTCA
CATATTTCAATTCTTTTGTTTTAAAGTCAGAAAAATCAGCGAAGACGGAA
AAAATGGCATAACATTTTGCACTGAGGATTCGTTTATTTGATTATTTTCG
GTGGGGACCAAAATTGTAGGGTAATTTTCCACCGGGGACGATATTTTGGA
CAATTTTTCCAGTGGAAAGAGGTCCCAGTGGGTCTGTGAAAAGGGGGTGT
AACAGTTGCTGAACTAAATTACACTCCTTCTTGGACCTACCTGGGAGTTC
CTCAAAATATATACAATCTATAACTTGTGTTTAGTTGCCAACTGATTTTC
CTTGTGATTGGCGCGTTCAATTTTCTGTTTTTTTTGTACAAAATAAACAA
TCATAAAGCCTTGATGGATGTCAAAGTAAATTCATTCTAATAGGCTGAAC
AATGGACCTTTTCATGAATTATTTTGAGTGCAACGACTGTCTCGTTTTGA
AACCATTACAAAGCCAATTAAATCCCTTGAGTCTTCAAGCGTTACTTTTA
TGGATAGGGTAAACTAGTTACGAACTATGAACTTATGAACTCCCCTGGGA
CTCAATTACCATAGCAATATTTTGAAAGCGAGGTATGTGTTGCTCGTCAT
GTGATATATGGAAAGATCTATTGCTTAGTTATACTTCTCCTATCCATTTT
GGAGCTATTTGGGGAGGTCCTATAAAGTAAATTCGTTCTGTTGCTGAAAC
TAAATAACCTTCTTTCTCCTTCCTATGTTCTTTTTTCATTTTCAGATCAT
CAACAGAAGACGAAGCATTAGATGATTATGAGGAATTTCTCCGTCAAACT
GGTCAAATTTGAAAAGAGGGCGTCACCACAGACGCCCCTTGAACACCCTA
TGTGGCCCAGCCATCCACCAATCAACAAAAAATGGGTGTGTTCAACCACA
TCGTGAAATTCTTGACCCGCCATCATTACCATGTGGTGACCAAACAACAG
AGTATTTTAACTTCATCACTGCAACATGATTGGTTCATTGAAGCAACCTT
TTGTTTTAGCCTTCAAATTTTTTTTGGATGTAAAAATCGCCGATTTTATT
AGAATTTAATGATAAGAAGCATGGAATGTGTTTACCGATTTTATCTAAAG
ATAGTATCTTTTTCGAGTTTTTTGAGGTTTTCCAGTTGCCTGAGTTTTAC
TTAATTTTGCACTGTTATACAAGAAATCTGTAAATTTCTAAATTTTCTGA
AAACGAAAATCCTGCTAGTTAGAGCGTAACCTTTCCTATAATAATCTACC
CTTACCTGACCTTTTGTGTTCTTTTTTAAAAAAGTCTGTCAGGTATTAGG
TACAGTAAAGGGTTACATTTTATACTTTGCTAACCTCAATATTTCTACCC
ATGTGGAATACCCACGTTTATTCAACGTTCATGTAAAGATGTTAGATGGA
CGTTGCTGACGTGACGTTTAGTGTTGACTGGGCAGCTTTCCTTGTCTTTC
CACTGCCTATTTTTGTTTTTCTACAGTCTTTTTTTCAACTTTCTGCACTT
TTTATAAGATTCTATAAGAGAAATTTATATTTATATATAAAGTTTATAAA
GTTTAAGATTTACATATTTCGTAGACAATAAGGATTGATTTGAAATACAA
AAATAGGTATATTATAGTAATCGTTCTGGTAAGAAATTTGTGTTTTTATT
GTCTAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00068044TCONS_00068044Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00068044-proteinTCONS_00068044-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_478supercontigscaffold_478:578892..582297 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.48	21.94	6.45	5.04	14.48	10.11	8.51	9.95	8.22	8.29	12.28	8.36	11.39	12.6	9.9	11.18	13.38	14.37	8.68	8.24	9.59	10.21	22.89	19.78	17.72	17.96	4.29	3.66	11.63	12.11