XLOC_042139 (gene) - C. hemisphaerica

Overview
NameXLOC_042139
Unique NameXLOC_042139
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_47:200966..209654-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042139 ID=XLOC_042139|Name=XLOC_042139|organism=Clytia hemisphaerica|type=gene|length=8689bp|location=Sequence derived from alignment at scaffold_47:200966..209654- (Clytia hemisphaerica)
GCGGGTTTGAAGGAGGAAACGTAAAAGTCTTCCAACGATAAGGCTGTGGC GTTATTCAACCTAGATTAAAAGGAGCAAAATATTTTGAAGTAAAATTTAA TGAAGTGGTAATAAATCAAAAAATCAGATAAAGAATTATTCACCAGTTAG TTAGACGACATCAAAATGAAAAGGAGGGACAGTGAGAAAGGTTACATGAA TAACTAATTTTCATCTTCATTGATGACGTCACAAAAGCAAATTGGAGAGA AATTGATTCATTGAATCAATGTATTCTTCTTCATCTTCATAAACTTCCCT TTATTCATCATCACGAAGGAAAGCTGTAACACATGTATATGAGAATGGAG GATGTTTTTCATAGGAAAATGGTATCAGTTTTCTGATTTGATTTTCGTTT ATATTTGTGCAATAAGGATAGAAGGAGATACATAAATTGTAAGGCAGAGA AGAAAAGTCACCAGATGACCACGGGATAATAGAATGACAGTAAGTTATAA TTCCTGAGATACAAAGCTAAGTTCTAATAAAGTACAGAATTTATTTCCAA CGAATTGGTGGAAATTAATGCCTTTTTCCTAGGAGAGCAGGGTCTGATTT TATTCGCCTCTTCATATTTTTAGAACTATTATTTAAAAGGATCTTTAAAA ACAAATAATTTCTAGGATCTGCTACTACCCCTTTTGATATTTGAAGGGTA AAGATTTTCGACGACGTTATGGAATGTCATTTTTTTCCTTCGATAACCTC TAATAGATTAGTCTCTAAGATAAAACCAATGACCTTTAAAAATAGGGTTA TTCGGGAAAATAAGTGAATATTAGTGAAAGATAAATGATAGAAAATTTGT TTAAGTTATTAAAAAATAAAATGAGGAAATATTCATCAGATTTACTTTGT GTTGAAAACACATGGTTGGTGCTTTACTAAGGGACGTCACAAGATGGGGT TTTTCTTCGGTTACCTAACGTAAATCTATATGGTAAAACAATCATGTCGG ATTTCCTAACATGGGAAATTTCACCCTTTAATTTGTGTCTATATAAAAAC ATTATAAACCGCATATTTCTTTAAGAACCCTGATTAATAAGAAAAAACTT CTGATAAAAATATCATCACATGTCGTGTCGTGTGGGTCTTAAGGGGAATG GTAAGCTGAAAATTCAGGTAGCAGGTTAGGCAAAAGAAATATTGATTTTG GAATCTTAAATATATTTGGGAGGTTCCCTGATAGCCACTGTGCTGATGCA AATGGCGAGAAGAAGATGCAGAGGGTTTTGCTTTTGAATAAAGGTACAAA CGAGATAAAATTAGCATACAATTAAAATGACATGAAAATTAAACAAAAAA AGATTTTGGATCTGACTGAGAATTGAAGCACACTTTGAAGGGAAATTGAT GGCTATATACGAAAACATCAGAGTCATAGAGAAATAAAAAATAAAGAAGA CCTTTAAGAGGATTTTACAGTGATCCAATATCCCAAAAGTCCCCTTCCAC AAAAAAGAAAAAAATGTTCCAAGCAGNCCACGGGATAATAGAATGACAGT AAGTTATAATTCCTGAGATACAAAGCTAAGTTCTAATAAAGTACAGAATT TATTTCCAACGAATTGGTGCAAATTAATGCCTTTTTCCTAGGAGAGCAGG GTCTGATTTTATTCGCCTCTTCATATTTTTAGAACTATTATTTGAAAGGA TCTTTAAAAACAAATAATTCTCAAGACCTGGTACTACCCCTTTTGATATT TGAAGGGTAAAGATTTTCGACGACGTTATGGAATGTCATTTTTTTCCTTC GATAACCTCTAATAGATTAGTCTCTAAGATAAAACCAATGACCTTTAAAA ATAGGGTTATTCGGGAAAATAAGTGAATATTAGTGAAAGATAAATGATAG AAAATTTGTTTAAGTTATTAAAAAATAAAATGAGGAAATATTCATCAGAT TTACTTTGTATTGAAAACACATGGTTGGTGCTTTACTAAGGGACGTCACA AGATGGGGTTTTTCTTCGGTTACCTAACGTAAATCTATATGGTAAAACAA TCATGTCGGATTTCCTAACATGGGAAATTTCACCCTTTAATTTGTGTCTA TATAAAAACATTATAAACCGCATATTTCTTTAAGAACCCTGATTAATAAG AAAAAACTTCTGATAAAAATATCATCACATGTCGTGTCGTGTGGGTCTTA AGGGGAATGGTAAGCTGAAAATTCAGGTAGCAGGTTAGGCAAAAGAAATA TTGATTTTGGAATCTTAAATATATTTGGGAGGTTCCCTGATAGCCACTGT GCTGATGCAAATGGCGAGAAGAAGATGCAGAGGGTTTTGCTTTTGAATAA AGGTACAAACGAGATAAAATTAGCATACAATTAAAATGACATGAAAATTA AACAAAAAAAGATTTTGGATCTGACTGAGAATTGAAGCACACTTTAAAGG GAAATTGATGGCTATATACGAAAACATCAGAGTCATAGAGAAATAAAAAA TAAAGAAGACCTTTAAGAGGATTTTACCGTGATCCAATATCCCAAAAGTC CCCTTCCACAAAAAAGAAAAAAATGTTCCAAGCAAAAAGCTGAAATACAA AATAAACAAGACTATTGATTATTCATGAAGCTCAAGGCGACTTTTCTTAC GGAGATTGAGTGGGATGACTTATAGAGAGAGCTTTTGTAATCCTGTGAAA TAATTCCTTGCCTTCTTATACAGGCAGACCGTACAAAAATCAGAATTTTC TTTTGAAAATGAATGTCCATTGAGTTCCCCTCACATTGCATACAGAGGAG CTCTAACCGGGTGATAGATTTCTCCCTTTTGACCCTTTTTTATTAGATCC AATGCGAGAAAGGCCCTGTTGAATGGGGGAAAATTTCTTTAAAGAAAACA AGAAAGAATTAGAGTCGATGGAGAAAAGTAAAGAAAGATGGTTAAAAGAA AAAAGAAAAGAATAAAAGAATGGATAAAATAAAAAAAATAAAAAAACATT TATGTTTTTAAAAATTTATAGAGCTTATGAAGAAAAACCTAGGACTCTTT AAAATTTTCTTATCTCGATATAACGTGCTTAGTTCAGCTAAGTCTAACAA TAACAAGGAGGGGTGCGAGAGCTGAAGTGAGCAATCTTTAAAGAAATGGA AGATTTTATCATTGAAAATCGCTGATTCAGCATTGAGCTGTCCAATTGAC GGATGCAAAAAATCATTAAATCTTTGTCAACACTTTTTAACGGATAAAGG GACGTCACATAAATATTTCTTTTAGAAAATCGAAAAAAACTTGTTTAATT CTTCAATGGGAGAAGAGTTATTTACACGACAGAGGAAAAAAGAGGAACAA TTTGTTAAAGAATTCAGCCAAAAACTCACCGGGGAGTTCCTGGCTTAATA ATAACAATCATCACAGTTAATCAGAACTAATCAAACATTATCATCGAGAA ATTTGAAAATTTCTTTCATAGTTGATTGTAAAAGGGAGAAAAAAATAACA TATTTTTTAATATGACAGCAATTATCGTACGACAAATTTTCCAAAATAAC GGTGCTGGCCAAATAACTCAAACGAGTGTGAGTTGAAGAATTTTTGTCGT TGTTTATAGGAGTGAAAAGCAAGAAATTCTTCAACATTGAACTGTTTTTG AGCATTGTCTGTTAAATTTCTGTAGCGTGAATAAAAGAATTTTTCGTGAA GATGGTATTTGTTCAGAAGATAGTAAAAAGGGAAATCTAGTTGAAGGAAT TCTCATTTCTGATGAAATCGGCAATCCATAGTCTAGAATTATCTATCAAA TTAAAGAAGAGAATTCTAAAGTCCGAAGCTTTTCAGAAAAATAAATTGGG TGGTTGTCTTGTTTTGCTCCTGGAAAGAATTGGTCGAATTGCCCAGATGC AATGTGTATATTTGTGCTGTTGATCACATTAAATACATAATTCTCCATTC TTTCTCATCTTAGACGACAGCAATGCAAGGAGGCTTCCCAAGCCAACCAG CCATCCGAAGCAACAATAGAGAACCTTTATCATCCAAAGTCAAGAAATGT CAATGCGATATGGACTGGTTTTTCAAATGGTACAACAAACAAAAATTCCT TATCAATCATGAAGGTAGATTCAAGGTGATGTGGGATTGGTTGGTTTTGT TACTGGTCATTTTTACAGCCATTCAGGTCCCGTTCTACGCCACATTCACC AGAACAGCTCCAGTGATATTTGACATAGGGGATGGTGGGCACAGTGAAGC TATTGTCATCTTAACCACCATGGTAGATCTCATTTTTATCGTCGACATCT TCTTGAATTTTCGTACAACGTACGTTCGATCAAGCTCCGAACTCAAAGAA CAAGATTCAAAAAAGATAGCAAAACATTATTTGAAGACATGGTTTCTGAT CGATCTGTTGGCGGCCATACCTTTTGATCTCATGGTACACGATCACGAAA ATAATTCAAACAGTAATGTAAGTTTTTCTTCTACGTTCATTCTTTCTGTG AAACAACATTAACATCGACGAAAATTTGTTAAAAACGGTAAATAAATTTG AATGAATATCTTGGTGCAGTTAGAAGTCCGAAACCGAGGAGTTAGGATCA ATCGGTAGACTTTTTATCCCGTGAGGTTTGATCCCTTCAAATGTTTACTC TATACTAACTTATATCTAGTATAAATAGAGACCGAGAATTCAACCTAGAC TCCACCATAACAGCCTTCTAAATAATCAAATGAATCTGTTCTTCACTTTC AGGCATCGACGGTAATCGGGTTACTGAAATCTGCTCGTTTGTTACGTTTG TTTCGGGTTGCACGGAAACTGGATCGTTATTCAGAGCATGGATACGCCGT ATTGTTCCTTCTGATGTGCTTTTTCATGCTGATCTCTCATTGGTTGGCTT GTGTGTGGAACTTCATTGCTACACACGAAGAACACATAGAGGATAGTTGG GTGAGACGGCTGAACGATGATATTTACCCACCATTGAAAGAGCAAATTAA ATGTTGTTGTAGTCGAATCGCGCAGAACGTTCTCATGAATAAATCACTGA TCAATACCACCTCCAGTAATTTCACCAACATAGCGGGCGCTGTTAAACAA TTACCGCCCATCCAGTTAGGCGTTGGTGAACGTTACATCGCATCCTTGTA TTTCATCGTTTCATCATTGACGGGTGTTGGTTTTGGCAACATTGCAGCAA CCACAGTGTACGAACAAACGTTCAGTGTTATACTCATGATGCTTGGAAGT GCGTAGTTTCTTACGATGATTTTACTGTGTTTCTTTTCTTTCTAAGTCAT TCATTTTCAAAGGGGCATTTTTGAACGTTTTCGTCGTTTTTTTGGTTTTA GCGACTACGAGTTTTTTGGTATTAGTTTATGTATGTATCACTTTGCATCA AAAATAACATTTTCCGAAAAAAGATTTGACCGACAGACTGTACACTGATG TGCCAGTGTTGCAAAGACTCGGGTATTACAAATAAAGGTTAGTGTGAATC ACGGTATGAAACAGAAGACCTTGAAGTATTTTGCCAGTAGGATTCTATTT AATGGTCCTGACACCTTTCCATTCTAGCACTGTTGTATGCTTGCATCTTC GGGAACATGGTGGCAATCGTGCAACGATCTTACTCACGACAAACGTTATA CCATAACAACATGACGAGCATGCGAGAGTTCTTACACTTCTACAAAATAC CGCATGATCTACAGAACAACATCAACAACTACACAAGGCGTGAATGGCTT TTATCACCTGCTCTCGAAGCTAAAACTGTAAGTAGTGGCAGGTGAAATAA GTACACGACGCGTTAATATAAGTGTAAGACAAATTTAAGGAGGTTTGTTT TTGTAAATTGTACTAAATCATTTTTTAACCATTTTTTCCAACTTTTATTT TACTTAATCAAATGGGTGTAAAGAAAAGTTAGTAAGAGGTAAAGGTTTCT ACTAGGTCTGTGCTTTGAAAGTTTTTAGCATAAGCTCTCTAACCACGTAT CATGTATCACGTATTGTTGAAACCCTGGTGAAAACCTTTTTCATTATTTT TCCCGATTGTTAAAGATAAGATGCAATAAAATCTTTTGATCAATAAAGAT TATTCAACGCTCATTAAAAATTCAATTTAAACCTTAAGTAAGGAAAAGAG GCCAATCTTCATTCTCGTTTTTACAGATGCTGAGTAACTTTCCTGAGTGT TTACAAGCCGATTTGACGTACGAACTCTACCAGCACGTGTTTTTCAAAAA TTCGGCTTTCCGTGAAGCAACGTTGAGCTGCATGAGAGCTTTATCTATGA AGATGCACACGATGACGTTACAAGCCAATTTATGTATCTTAAGACGAGGT GATGAGATCGATAAATTATACATCATCGAGAAAGGGGAGATCGAGGTACA AATTAAAAACCCTGAAACAGGTGACAGTCAACATGGCAACAAAATCAAAT TAGGTAGGCTTTGAATTTGTACTCATCCATTGTTACACCACTAGGGGGGA TCGGGTGTGAGCTTTCTAGGGTCGAATCACGTATAGGGTTTAAAAAGTCA ATGAAAACACTTGTGAAATTTTTATCCTCTTCATATATCAAGATTAAATC GAACCCAAAAATGCGGCGATCAGGTGCGAGTATCGCATTCTATTCTAAGT AAAAAGAGAGCACCCTGGTCCAAATAACACTCTCAAATATTTTTGAATTT CACAGTCTGATTTTTTTCTACGCATTTTTCAGGGAAAGACAAAACGTTTG GATATGACGTCAAAATGATGCCACGCAAACCGAAATCGAATTCGAACGTA CGAACGACCATTCTATCAGAGATACATTATATTGACAAGAATGATTTGTT AGAAATTTTCGACACTTATCCAAAGTTTGCAGAGAATTTCCGCCATCATT ATTCGCATGGATTTGATCTCAATGACGTGGAAGAGGTAAATAACTACTTT TTTAAATACTGAAGACTTAAAATGGTTTGATACACTATCAAAATTCTTGC TAATGATGTACCTTATTGATTAAGATTTAATAACATAAGTGTCACATGAC TGTTTCTCTGGTTCCTGAAACGTTTTTAAGGTAAGACTTTCGTCACGAGC CGAAGACAACCAGAAAAAGCTCCCAAAATACCTTAACCCAACCGAATCTT TATACTAATCGAAAAGTAAGCGGTAAAGTCTTTTTCAAGCCCATAACTTT ACAAAGTGTAGCAAAATCAACGAGATTTAAAATGAGACATCTATTTTACT CTTTGCAGGAGGGTTATTTCACGACGCCAGTACGAAAACAAAAAGTGCAC TCCAACCTCTTAGCAAGACAAGCAGCACCCATTATCAACAGAATCCATCG ATTCAGCAAACGTCGCAAATCGCACACGTTTAACGGTGAGATTGCCAAAG TACGTTCCGAAAACTGTCTACTTGATCCCCGATACAGTTTGAAAATGAAT TTCTCAGAACCTGAAGAAAACTTGACGATGAGTAACGACGAACTTTCATC TTCACGAAAACCGAAGACGTCGATTGGTCAGTTCAAGAAACGCGCTCTGC AACAGACGATGAGTGATACCAGTTCAGTAGCCAGTAATAACTCCACTATT CATTTGAGGCCGTTAACACCACACGTTACGCCACGTCGTAAACTTACTGC TCCGGCGATCAGTCCTTTCTTATCACCAACCAAACCAGACATTGAGACAC GTCTCGACAACTTAGAAAATAAAGTCGAAGACGTCAATAAAAAGAACGAA CAAAAATTGAATCAAATTTTAAGACTTTTAACGGAGTTGACATACGATAG ACGTCAGAAATCGCCGACGATCAGCAGTAATCAGTCGGAAGAATCGCTTA ATCATAAGAATGTTAAAGAGGACGAAACGTTGAACCATTTTCTTGATACG TACACAACATCTTCAGCAGAACACCATAAAGACAATAACATCAATTTCAC AATGAATGTAGTGGACTGTGGTGACGACTTGGTAGATTGCAACGAAACAA CGCCTTGGTTACAAGAAAGTCAAGAAATATGTAGTCTTGGAGATAGGATA GAGAAAAAGTGAGAAGATATCTAGCTCAAAATGAGTTTTCCCGCCCGAAC AGAATAATTTTCATCTCTGAAAGCATTGATGGCCACCAACAATCGGACAG AAAAAGGTTGGTGAAAAAAGGTGTGAAACCAATTGAGAATTATAACGTTT TTCTTGGATGAATTAAGATGTCCGACAAAACGAAGGCTATCATAATGCAA AACTGTCACTAGAGGAATATCATATTTTATAAATAACCCATACAAAATTA GACATATAAAATGAGAAAGATATAAATCCGAAATTTCTCTACCTCAATTA TCACATGAATTCTTCGCCGGGCTCTGCTTTCTCTTCTCCTTCTAAAAAGC TTTTTTTCTCCATTCCTGTCTTCGATTTGGATATGAGAGGGTGGAGTGCA GACCGCAAACTTTGGAAGAGGTTTGGAAAGAGTACTTCTTGATGAGCCAG TAACTGCTTCATTCTATGGCGTTCCTAAAATTTTAATAGTTCTTGAGCTT ATCTAATTCTATAGGAAGGATTTCGAAAGGCCATTAAAAAATTTTGGTTT CTTACCCGCTCTGTAAAATTTTCCCTTATATCTGCTAAAGAGGCTGTTTA ACTTTATCATTTCCTCAATTGATTACAGCATGTCCCGAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067468TCONS_00067468Clytia hemisphaericatranscript
TCONS_00067467TCONS_00067467Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067467-proteinTCONS_00067467-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_47supercontigscaffold_47:200966..209654 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.08 0.18 0.39 0.57 25.94 20.01 18.39 19.95 10.99 9.92 15.67 8.86 8.2 7.37 7.16 5.59 3.2 3.51 7.88 9 2.59 2.17 1.72 2.38 4.1 4.9 2.65 1.93 0.53 0.56