XLOC_042097 (gene) - C. hemisphaerica

Overview
NameXLOC_042097
Unique NameXLOC_042097
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_469:440034..443915-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042097 ID=XLOC_042097|Name=XLOC_042097|organism=Clytia hemisphaerica|type=gene|length=3882bp|location=Sequence derived from alignment at scaffold_469:440034..443915- (Clytia hemisphaerica)
AAACTACATAAAAATATGATGGTGGTGGTGGTCGATGGATAGCTGACGGC
AGAATTATCTGGCACTTTGTTGAAGAAAAGCAAGGTTAGAATATTTCTTA
CTCTTTGGTTACAAAAAACTCAGTTTTCTCATTTTCTTCACGCAATCAGT
CGGAAATTTGATATTCCGAAAAATGTTATTGAAGAATTATTTTAAGCAGT
TTTAAGGTGTAAAGTTGTAATTGTATCTTTCTCTGTTCTACTTAACCCTT
TGAGTGCCAGGGTCCTTTTTTCTAAGTTTTTTTTAAAAAATCGCTAGTTC
AAACTTTAAGGGCTTATATCTCCTGATCTAGAAGGAATTAGAANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCTATA
TAGCCCATGTCGTATATATACGACATCGGCACTTAAAGGGTTAAAGAAGT
TTTATTCCAGTTGAAAAGTATTCCCTCTTTTCTATTCTATTCTATTCTAT
TATGGTTGAGTTACAGGAGGCCCTAGGAGCCCATTCTCGCAACTATAGAT
GCTTTGAGTAAGCATCCCGTCAGCACCTTGAACTGACTACCCAATTCCCC
TCACATGGCATGGGTTGACCCGGGCGAAGGTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCGAAGGTTTGT
TCACTTGCCAAGTGAACCGTTGTGAGTGGGAATCGAACCTTGGTCGCCTG
TACAGGAATCAAGGTTGATGTCCACTATACCACAACGCCTTCATAGGAGA
AAGAATTCAAACTAATTCCGTCTCTTATATTTCCACCTGTTTAGATGATG
CAAACGTACAAATATCCAGAGGGTGACATTTATGAAGGGGATTGGTCGAA
AGAAGGCAAAAAACACGGTATCGGGAAAATCACGTTCACTGATGGCACAA
TGTATGAAGGACGTTTCGTCAACGGTTTTTTTGCTGGCTATGGAAGCCTA
AGGTTACCTGATAACACTGTTTATGCAGGTTTGTCCAACAATAAATTTAA
TTACTCAGTGATTTAGCTTTTCATTTTTTTCATCTTCATTTTTCAATTGT
TTTCATCTTTTATCATTTAGACCCTTCTCCTTGAAAATATCTTTCCAACG
GCGTAAAAGCTCTAACATAGCATGAATAAGTGTTTGGAAAATGATAAAAA
ACTAAACTGTCCACATACATTTGAGACAGGCTTTAGTATCTAACAGTAAA
TATGCCAGATTTTCTGGAGGTTTTTTTTCATTTTTCGAAATATTTGATTT
GTGGAGACTTAGGACGAATTTGTCACTACCGATTTGGAAAAATACTGAAG
TTGAGCTAGTATCTAACAGTAAACAAAATCCTATCCCACCTTGCCGGTGA
CTAAAGTCTTTAACAATTTTTGGTCCAATTTATCCCTAATTTAAGACCAA
AAATGCTATACACTAAGATGATAAAATATTTCTATTATTGCTCTTTCTGT
AGGTGAATTCAGTGACGGTCTTTTCCATGGCTTTGGCGTTTATCTGCGCT
TTGATGGTATGCAGTACGAGGGAGAGTTCAAAGAAGGCTCCCCCAACGGT
CCAGGGCTGGTCACTTTCGGGAATGGGTCCTGTGGCAACCCCCGGATGGA
AGGTCATTTCGACGGAAGTGTTTTGAAGAGTCGACAATCGGTGAAAGAAT
ACATTCGAAGGGCTCAAGTTAGTCGTGACCGCGCTTTAAGGACTACTGTC
GCCAATGCGTTGAAAGAAGCGGAAAATTGAGAGACTTTCTTGGGAATTAT
CGAGGTTGGTTGTGTTCGAACCTCTTTCGGTTTATTAATCATCTTGGTGT
ATAAAGCAGTTGTATTGATTGTTGGAAAGATGTTCGAGACATCTATTATG
ATTACTGTTAGAAACAAAACACAGGGCCAATACAAAACCATAATGTACTT
CATGGAACCTTTTGTGGGTGATTTGATGGACTGTAATGAAACATGACAAG
AAATTTTAATATTTTTCAATTTTTTTGAAAAAGGTAGAAATTTTTTTACG
ATATTAGAATAATTATGATACACAGGTAAAGTAAATATTAATTTTTTTGG
CAAAAAAGGAAAAAAAATGAACTTTTTATAACACGCTTCATACAAGCTGA
CCACTTTGCATTTCATAAAAAATGCTGTAACTTTATTCACTAGTTAAACA
CTTTTTTTTTGGAATATCAAATATAAAATAATTATTACGAATAAAAAAAC
ATTTGTTTGCAGTCTAAGAGATCCATTGTTCAACCACTCGGGAGTTAATT
ATTTCGTGTACAGCTGTTAGATATACGGTTGGCTCTAATGAGAAGACTTG
AATCGCAAAATTTAATGAAATAAATTTCCGCCAAAATTCGTTTATTAGAA
GATTTTTTAACTGCAGTTTTTTCCAAGAGACTAGACTAGCCGATTTTCAG
CAATTCATGGCGAATTTTGTTTCATAAAAAAAAAAGAAAAATCTTAGTTG
AGATTCAGAAAATAAATTACGAAAAAAAACAAATTGTTATAGATTTTCTA
CCTAAAAAAGTTATATATAAAAAATATTGGTGTTTATATTGAAGTCCCGA
TATCGTCTTTGATTTTAACGCGCATTCCTTCTTGAGGCATGCGTGGGATT
GTCAACTTCGTTTCAGTCCTCAACGAGCTAAAGACCTACGCGGCAAACCT
CATGTCGTTTTATAAATAAAATCTATGAAAGATATACCAAATGTACATTC
CGCCCTGAGAAAGTTCAGACAAATGGGCGTGTCAATCATTCTCCGCCATC
ACGCCCTTTTTGTCTTTTAATTATTTTCCACCGTTTATTTTGGTGACCTT
ACTTCTTAGCGTTTTGATTTCCTTCAAGTCCTTCAGGCGAACGGAAACAG
GTCTTGGGCAAATACTGATACAATTGATGCACAAATTCCACTTGCGCCCT
CAGTGGATCCAAGTCTAATTCGTATTCAGTAATTGTCGCATTCTGAGATT
TTAATTTATTTTGTAATGAATTGATTTCGAATGAAATAGCACCATCTATT
TGATCTTGAGCTGCGGCGAACCTTCTTTCAGCTTCTTCCAACTCGGCAAG
GTTGATTTCATCTAAATTCTCGATAGTTTCGATCAAATTATCGACATCCT
CGAGACTCTTTGTCAGATCGTTATTTGCTTTAGAGGCAACCTCGGCAGCC
ATCTTGGAATCGTCACTCGCCTTATCGACTTTCTTTCCATCCTCGATGGC
GATTTCCTTGTATTCATCTAACTTCTTGTCGGTCTCTTTGATGTTGTTCT
GTGTCTCGACTACCTCGTTCATCATAAAGGACATGGTTTCGTTCAACAAT
TTCTTGGCTTGGGCAATCAAGTCATCAATATC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067402TCONS_00067402Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_469supercontigscaffold_469:440034..443915 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0 tpm) - - (6.61 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29	0.11	0.25	0	0.44	0.43	0.44	0.27	0.38	0.44	0.12	0.29	4.07	2.57	0.05	0.16	0.35	0.23	5.03	6.61	1.02	0.78	0.88	0.83	0.79	1.82	0.31	0.2	0.3	0.27