XLOC_042048 (gene) - C. hemisphaerica

Overview
NameXLOC_042048
Unique NameXLOC_042048
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_468:29140..31066-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042048 ID=XLOC_042048|Name=XLOC_042048|organism=Clytia hemisphaerica|type=gene|length=1927bp|location=Sequence derived from alignment at scaffold_468:29140..31066- (Clytia hemisphaerica)
TTTTTTAAGAAAGGCGAGGCTATAACGAATATCATCATCTATTATTTGGA
GCTTGAAATATTGAGAGAAAAATTTTGCCAAAATGTTTAAGTCTGTATAC
TTGCACAAATCGAAAAAGTGGCTATTCAATAATTTTAGCTCTGGATCTAT
TAGCTCTATATCACCATCAACTTGCCTAAAAAATTCAGCTTTTGATTCCT
TTTCTATCAAAATGTCATGCATACTTTTCTTACCATTGAGCTTAAGCCTA
TTGAGAGCCTTTTTTTATTAGAGAGCTTCCTGCACCCATTTTCTTGCAAA
TCTACATTAATTATGCAACGCACAAACAAACAAACTTTTTCATCAACATC
ATTTTCATTTACTGCATATTCTACAACCGCCCATTGCTGGACATGGTTGG
ACATGGGAAAGTATCTCACCGTGAGGCCTATTCACTTAGAGGTATTTTCC
CATGTCGAACTAATTAAATTCAAATTCACATCATTACTTCTTGCTTAAGG
CAAGAGAACAAAATTGACTAATAGAAATAATTTTATGACCAACAACTTGA
TCCAACAAAGACTTGGCAGGGCGACCTCTTCTCGTGTATTGGTCATCATT
AAATGTTAATAATTTCAAAGAACGAGAAGAGGGCATACGGATGACGTGTG
CAGCATAGTGATGTTGCTGTGATTTAATAAAATAGCTAACATCAGAGGTT
CCACAGATCCTGTGAAGCTGCGCATTGTTTATTGAAAATCTGTAATCATT
TTGATTCTCATTCACAAATCTGAAACCACCACGTACCATTCGACGCAGAA
ATTTTCGATACGCCACGTCAAGTCGATCAAACTGTTCTTGATTAAGGTTC
CAATTCTGACAGGCATACACAAGACGACTTCGAACAAAACAATTCAAAAA
CAAAACTCTCGTTTTCAGCTTTAAATGAAAATTTTGTAAAAGATTTGACA
TTTGTGAAGATTTTGCAGATGCTAGCTGAATACGGTGAGTGATCTCCTTT
TTACCAGTATTAGGCTGATTCGAATTGAGATAAGCACCAAGATATTTAAA
ATCTGACACGTTTGACAGTTGACTTTCACCGAGATCAATAATTGAGGATG
GGTAGGGTATTTCATCCGGATGGTTAAGTATCATCGTTTCGGTTTTTTGA
GAATTAATGGATAAACCAAATTTTGTAAAGACTTCATTAAGCAGAACAGT
AGCGCTCTGGAGACCAGTTTTTGATTGTAAAAATTAAACTAAGTCATCAG
CATAGCCACACCAAGGTAACAACGATGTTCCTGATGAACTCAAGCCTTTC
TCGCGCATTATCACCCTTTCATTTCTTGAGATTGAATGACTATTTATACA
ATACTTGTGGACAAAGAACTGGATTAATGGATCATTACGGCTTTTCTCGA
TCATCAGGCGCATGACAAAGTCTATGTACAGATTGAAGAGAAAAGGGCTT
TCTGGGCCACCCTGACGAACACCGGATGTGGTTGCGAAAACTTTTCCCTC
GTATAATAGAGATGTATGGTGATACAATTTTTCAAGAATTTTGAGCAATA
TTGGAGATTGACTGTTGCGAAATCGTAAGCTTATTGAGTCAAATAACCAT
TTACGTGGGATGCATGTGTATGGCATAAGTTAATAATGCAATCAAAAAGT
TTATAAGTCACAGATTCAACAGTAAAATTAGGACCATTTTCAACAATTTT
CTTTTTGTCAGATTCTAGAAATTGCTCAATCAGAACCAGAGCTTCTTCAG
AACTAAGACAATCATTTGCTGCCATTTGCTGTGAGTTGCAATAACACAGA
GGAAAATTATCATTATAGTCTACATCATTTTTATACCTTTCCTTTAAAAA
AAGAAATTTAAAGAATTATATGACTTACTTTTTTAAAAGAAAAGAACATT
AAATTGCATTATAATGAAAGTAAAAAC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067293TCONS_00067293Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067293-proteinTCONS_00067293-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_468supercontigscaffold_468:29140..31066 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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min expression (0.3 tpm) - - (3.06 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.74	0.3	0.54	0.34	1.38	0.67	1.64	2.47	2.3	1.7	1.99	1.66	2.08	1.69	1.54	1.54	1.52	1.37	2.13	3.06	1.78	2.14	1.37	1.45	2.25	2.14	0.85	1.14	0.63	0.52