XLOC_042041 (gene) - C. hemisphaerica

Overview
NameXLOC_042041
Unique NameXLOC_042041
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_468:161370..166444-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_042041 ID=XLOC_042041|Name=XLOC_042041|organism=Clytia hemisphaerica|type=gene|length=5075bp|location=Sequence derived from alignment at scaffold_468:161370..166444- (Clytia hemisphaerica)
TTGGTAGAGCTTTTGAGAGGACAAACAAAATCCAACTTTGACATTCAGAA AAGTAAATATGAGCAAGAATGTCTGCTTCAAAACATACAGTAAGCTGGAC TTGATCCTGAAAGATACATTGGTATGCTTCCTAAAGTTGATGCCATCGAA GATTTGTTCAAAGCTTGGTTTAGGATGAACAAAAGCATGTACACAAACTC TATGAAGTCATTGCCTGCCCGTATTTTGACAATTGATCATACATTCAAGG TTAGTTCTCAAACAGTTTTTCATGGCAATTATTGTTGAGTTTTAAAAGAG GTGGGATTATATATAACTTATTTAAAAAAATCAGAAAGTGGTGTAGTAAA TAAATTATACTGACTAGATCAAATTTGTTTACCTAAAGGGATGAAATTTT TGCGAAATCTAATTTTGCGGTTGCAGTTAATTTGGGCCGTTAATTTCGCA GTTAAAAAGATTTTTTGTTTAACATTTTATATGGCCTACTTTGCCCTAAA AAGACTAATTTTATAGGTATGATTATTTAAATCATGAGAATAGTCGTGTT TTCTGGAATTTAATTAGGCAGATTTGTCAAAAAACCTGGGAAATTGAATT CCACAAAAATTTCTTCCACATGGCTGTTCACATTGTACGTACGCACTAAG GGGGAGGGGTATCTTATCGAAAGCTTGCGTATAGGGGGAGGGTGGGTATT GCACGCCAAGGCGGAAATAAATACTATCTTTCATTTTGCGACACTATCTC TTCCCAAAAAAACATTATCTTAATTAAAACGATACTATCTTTATTACAGA ATCTTTATTATGGAAACCGAGAAGTCCCATATCTAATTTTGGTAAAAAAA TTAAATTAAAAAAAAATATCAATTTAGAGAAAAATTAAATTTTAGAAAAA AATTAATTTTAGGAAATAAAATTTTGTTTCAGAGAAAAAAGAGAAAAATT CACCGTCTGAAAAAAAATTCTAAAAGAGAAAAACTTGTTGGCCTGATTCC TCCGTGCACACTTGCAACTTTTGTTTTCATGCTTCCTGGATTTGTGACCA GATGATTTTTTGCACATAGTTGTCAATCCACAAACCCAGGCGTTACTAAT CGATCGATTATCGATTAAATTCGATAGCTAATCGATACTCACAATTTTTT AGCACTCAATTAAATTATCACCATAGATTTTTAATCGATAATATTGATTG CAGTGTAAATAATTGATAATATCAATTAATATCGATATAATCGATACCTC GACCTTATCGGTTCTTAATCGATAATATCGATGACACTTCTAATTGATAT AATGGATATCTTATATCTGATCGATATAATCGATACTCACAACATTTTAG GCGCTGATTATTTATCGATTATCGTTTTCATCGATATTTAATCAATTTAA TTAATTATCGATTAGCTATCGATTTTAATCGATAATCGATTTTATTGATT AGTAACGTCTGGACAAACAATGCAAGTTGACAGAACCAAACTTTGAAGAA AAAAAATTATTTGGGCAAATGGGCCAAAAACGACCCAAAAAATGGGTTTT TTCAGGATTTGCTCAATATTGAATAGGTAAAATGTTTTCTGATTTTTTAT CATATCGTAGGTAACGGTTGAGTTAGATTTCAGTAACAAAAATAAATCTA CATAACAAACCCTTTTTATAAGAATATTTTTGATTGCATTCAAAAATAGA ACCCCAAAAAGTGAGGTTTTCAATCACAGCCACTTTCTAGCCCACAGCGT TGATATTCTTGTGGCTGCTGTGTAGTACAAAATTCNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNTGTCCTGCTTTAAGACTTCAATATTTTTTAACCGTTTTTCTT GGAATTGGTAGTTTGAGGTCTGATAAAGATACTTATGGGTTTAATTTGTG GCTGCAGGATTTTCAATGGGCTTAAAACAGCTTAAAATGTGGCTTCAATC ACTAATTTATCAATTTACAAAATCCTAACCTGAGATCAGATTGTGAATGT TTTCTGCACACCACGCTGAAGCTCTAAAGGGATGTGTGAAAACAAACAAT CTGACGAATATGCAATCTCGAAATCGTAAGGACCGCGTTCGTCTAAAAGG ACTGGGAATGATAACAAAGTTGCGCGATTGTGTTTATGAAAAGGGCGCCG TATCAGTTTTTATTTTTCCGGCGCACAACAAGATTCTTGTTGTAGAATTT TCAGCGGGAGGACTATTTTCCTCAGATGTATAATTTTCAAGCGCCTTTAG AGGTTTACCGTGCGCTTAAGAAAATTATGAACATCTGTTATCAGGTTACA AATTCCAGGTTGGGTTTTGTTTTCGAAATATGAATATTTGCAAAGCCTGA TGCAAAACAAACACAATCTGACACAATACAGTGTTATTTTAAGAAAAAGN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGGAT AAACCCTTTTGCTACGAGTTTCATCTGAAAAAAATGATTTTTACTCATTG AACAAATTTGTGGCTGCTGTTTTATCAACATAGTGTTTTTCTTGATTTGC GCCGCAGTTTTGGCCCATTTTACAAAAAAGTTTTTTTTTTCAACCTACTT ATATCACCTTTAGAACCAATATTGTGAAGTTTCGTTTGAAAAGAGTTATT TTTAAAAAGGATATTCAAATTTCTTTTTTTTTTTGCTGTTTTTGAAAACC TCACGCAATTTTTGAATGCTATCTTTTTCTAAATTTAAATTTATTTTCCT AAATTGAATATTTTTTTGTCGATGGCATTTCTCGGCTTCCATAAAAAAGA TAGTATCCCCTAAAAAAGATAGTATCGTTTAAAAAAAGATGGTGTCGTTT TAATAAAGATAATGTCGCGAAATGTGTCGGGAAATAAAAGATAGTGTCGC AAAATGAAAGATAGTACTTATTTCCGCTTTGGCGTGCCATAGGTGGATTG ACTGAAAATGTACCATATATATCATAGCTTTGTGTTTAATGTCGACATAC CTTGTCTAATTCTGCCATAGCAACTATCTGGTCTGCAAAGTAGTTTAGTA CGGTATAATTATGTAAAAATTGTGCACAAAGAAAGACGTGCAAGCATGAG ACTTGGCACTATTGTAGTTTAGGGGTCAAAATTGGATTTAAATCTTATAC CCCAAAAATTGACACATGTCTGTGTATTTTACAGACCAGAACAGGTTTCC AGGCTAAAATGAATTTTTTTTTCTCCAAAGTATGTCATGTTCAGACCAAC ATAGGTAGGGTGTAACTCCAGAACGACCCAAGAGGTTTATTTTTTTTATT GTTGTACCTATCAGGTACGATTAATTAGATCAGATGCAAACTTGAGTCTG CTAAATCACATGCCTCAAGTGCCCTGAATTTTTAACGTGCCCTATTTCTT TACGTGCCTAGAATTTTTTATGTGCCCTAATTTTTTTATGTGCCCTAATA TTTTCATGTGCCCTAATATTTTCACTGGCCTTACTTTTTTATGTGCCCTA TTTTTTTCCACGTACCCAATTTTTTCATGTGCTCTAAATTTTTCACATTC ACAAAATTAAAAATCACATGAAAGTTGGCACAAATCACTAAAAACTTAAA GTATAAGCTGATTTTTTAAACAGCTTATTCAGAAGGTTTCATCTATAAAC ATTTTAAAGACCAGATAGTTCCTATGACAGGAATAGACAAGGTGTGTCGG CATTACACAAAGTTGCTGATGTCAGCATCTTTTCGTTTTTGCTTAGTAAT ATATTTTCTGGGTGAAAAAAGTAATTACGACACAGCCATTCTAGTGATGT ATGAAGTGATATAATTTGACAAGTAAAAACGGTGATTAAAAATTTGGGTG AATTTGAAAAATTGGGACATGCCTTGAATCGCCTGAGTGCAAAATTAATC GATTTTTTGACGAACTAGAAATGACGCTAGTTACTTGTTGCCAACTAGCC AAGCATCTGTCTGCTCCTGACACGAGGCAGTATTTGAGAGGTAATCATTG GTCTAGGCATTTATACAATTCTGCTTCTCTATTAGATATTAAATTGCTGT ATAAACTAATTCAGAACAAATTTTTTGTTCTTTTAGGTGACGTCCAATGT TGGAATGTTCAGACAAGGTGACAATAAGGAATGGGTAAAGCTTTACAATT CTCTCTTTGTTGCACTTAATAAAAGAAAACAAATCGTCACTTGGCATTTT ACTCAAGGGGAAAAGTTCAGTTTGGTAAGAGATATCCTTGACAAACTCAA GGAGCGAGAAAACTTTAAAATTGAAATGGTTCTGTTGGACAATTGCTGCA AATACGATCTTGTCATCAACGACATATTTGGAAACCAAATCTTCATTAAA CTGGACCCGTTTCATGGGATTCAAAGGATCACATCTACCATTAGGAAGAA GCATCCTTTCCACCAACAACTATGTAGTGATCTGCACAATCTTTTACGCC ATCCAACAGACCTATCCTCGAAACGAAGAACTGTGGAAACTGCCTCTAAA GAAATCATTCTGGAACTTCTCGATAGAATAGTTGCGAAATGGGAATCGTT GGAGTTTATGTTGGACGAAAGGTCATTGATAACGATGGAAACAAGAGAAG CCTTTCTCAACTTAAGGAAGCATATTTCTAAAGGATGTTTATCCAATATA CCCGCTGGTTGTTCTACAAGTGTCAATGAGAATCTTCACAAGTGAGTTAT GATTATTTAACTTGTTCAATGCAGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067286TCONS_00067286Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067286-proteinTCONS_00067286-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_468supercontigscaffold_468:161370..166444 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.57 0.97 0.41 0.17 1.97 1.73 1.07 1.32 0.22 1.25 0.37 0.56 0.31 0.29 0.56 0.92 0.78 0.24 0.33 0.76 0.86 0.52 0.66 0.87 0.39 0.35 0.21 0.23 0.12 0.12