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Sequence
The following sequences are available for this feature:
gene from alignment at scaffold_466:255678..264637+ Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_041976 ID=XLOC_041976|Name=XLOC_041976|organism=Clytia hemisphaerica|type=gene|length=8960bp|location=Sequence derived from alignment at scaffold_466:255678..264637+ (Clytia hemisphaerica)
GTTTGTGACctccagaaagaaaaaaatcagtcataAGCTGTGTCTGTTAT
CTTACAATTCCTTCTTTTCATTTGCTGCCAACGCTAGAAGTTGATGGTAG
GTAGGCTGACTTACTTTTTACCTTATCTCTAGTCTACTCTTTAACACTCT
TTTTGTTACTTCTCAgctcaaatttcaattttgtttttgtattgtttgtt
tttactttattctAGAAGAGATCTAACTTCTTTCTTGTCTGTCTTTTTAC
GTCAGTAACTTTCACTTTTACTGTTGTTAATTTGTCATAAAGTTCTAGTG
GTGTCATGTTTAAGTATTattttacactagaataacctTAAAACAGTAGG
Gtggtcaggccaaaattttcccctcaaattttgaaaaccaaactaatttt
atttgaaagtccttacctttgtgagaaaaatgaggggtcatttgttaNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNgtatttaaaaaaaaagaatgaacaagtttggagttg
ttaaggataagttatgatggatggaatgttctaattttgattttcgactt
tttccacgCAAAAACGCCCTGCCCAGCGCCAGTTGGCAACCGGTCTAGTT
Atggcgaccgaacgtctttgaatccagaaaagtcatacaaaaacaaacct
ctggagaatttcttttggtagttatctgccttgacctattccccgtactg
tgtaaaaaaaattctagaaaaaaacaagtagaatccgaaagatccaactt
tgcacggaagcattcgaaaaagccggattttttgaaaaaaataaaaaatg
gctacctgtggacaaaaaagcttcgtaAGTAAAAACGTTTCAACTAacac
tccaaaaaatacttttccaAAACGATGAGTATGTTAGAAAGTATTTCTAT
ATTTAAAAATCAGCTCGATAGGGTTTCCTTcgtctgaaatattgataaaa
aagttgatgcatGCAATCATTTTCGAAATAagacgtccagtctgcgaccg
aaaaaatcgaaagtgagaaaaagaagactctacattgcaatcaaaacatt
ccagatgctgagaaaaaaaagaagactttacattgcgatcaaaacattca
agggGCATGCCCGCAGTCCTTAACTTGACAACTCCAGCAATGCGAAGTTT
CTAGCTCCGGAttgaaataacaaaggaaaCCGGTATATTGAATCTCGGGG
tagacataaaaaattcccAGGTTTTTATCAAAGAAGACTCTCTATAGAct
gccactttcaaaacaaaacaaaaacaaactttactttagaaaaaaatggc
gacttgaagaaaaattctaaaaaaacatgccaaagtgagctattttaaaa
caaaagaacgagtgcaaagaaattaaatatgagtttttttatcatcctga
tcaattcATATGACCTAACCTGCAAGTAgactgattttctctttttagcg
atcggtcgcagactgattttctctttttagcgatcggtcgcagactggta
catcggtcgggaactgggcactagtaccgctcgcttcgaaagttttttat
tctaagaagattgcctcaaataaaaaatcaattaacaaacacgaagagca
tgttaaaagttgtctaaccCTTGGTCGAAAAGgattaaaaagttaagaag
tttgtgagaaatttgaataaaaaaatttcgatcgccaactgggcagggta
ctctacAGAGGGTGGTTCAGGCCATTCGAGAATTTGTCTGTGTAACAGGG
ggggacgacacaggatttctgaGGGCAAAAGtcttcaccaaaattcgaaa
tttccaaggcaagagaagaaaatgtatgaatttctaAAGCAATTGATTGA
ATTAAAAacggcaaaaaagagtggaatttctgaCACATTTTGCAAGAGTA
CATGAATTTTCATCATGAATTTTctgaccaccactggaaaaaagaattat
ttccgaggctagaaaaaattttcaaatgtacGTCCTCAGACGGGGATAAC
GAGCATTTTTTGGAATGGCCCTTTAGattttttaacccttttcaGTCCCA
GAGGTTTTACAGCCTGTTACagctaccgtgagattgggtaacttgcatca
gtggaggctaacatgcatagccctcaaatgaaagacctggctNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNatacaactatgcagctccg
ctcgcagctctactctaccatttttgttttgatttaattttgtattttaa
tgaccagccaggtctttcatttgagggctgtacatgttagcctccactga
tgcaagttacccaatctcacggtacatcaaaggaaaaaatttgaaagaag
aaaatttggaagatttggtcaaaatctgtcaaattaagttcccgccaaat
taaattttttctgtcgtctgccaaattaaattaccGATAAATTTAAGTTG
CTCTATTTAtcccccaaatgtgtgctatttcaggctttaaaacaggtttt
tccttttttaattgcgttttttggacaaaaatgtccttcgtccgccaaat
taaattcctgctaaatttaatttttcaagttaacggTCAAATTTTATTCC
CtctgaaaaaccttttttggcCATCGGCAAGGAAGAAgctgtaaaaaatc
atttttgagccTACAGTCTTTGTTGCTATTTTATGTAATTTTAAGGGAGG
GTAACAAGTAGGCAAAATGGGTACCAGGTATGTGCAAGCCAAGGGTCCCT
TTTTTTACACCCTTTggaagtctctcaaaggggtacaaaaattattaaaa
agcaaTGAGTTtctgtaagggttccaaaataataaaaatcaatAATTGAC
TCCTTCAAAGAAAGGGATATTTAAATTCTTGAAATATGgacgaaaatgaa
aatgaaattttttgaacaTATTCTCTCAGCTAAGGGtggcaaaaacatca
aaaatgggcaaaattttaaaaatttcttgcAAGCCTAGTATATACAGGCT
CAGGCTCTTAGTGGAAAGTTTTCCTCCTTGTTGTTGCCTCACAACACTTT
TGCTGAGATGAGCAAGCCAGCAATcctcaaaatggcaaatttcaaatgaa
aagcCTAGAAAATAGCACAAAATGGGTGCTTTAAATAAAGAGCCTCAACA
ACTACTTAAAAGCcaccaaaaatttaatttttcttctctcaACTCTAGTT
AGCACCTTGGAgcctttgtttattttttcaattgttttcaaatttcttgG
GGGGACActcaatcaaagaaaaaagatcCTTACAGTACTGtgcattttta
aaaagattatttaCCATTTTGAGGCATAATATGGTCAGATTTCCCAAACT
TTACATCCTTAGATGCACTTTTGCTCATATTTCGACCCTTACTGTGCAAT
TTGGGAAGCTTGGGAAAAGGACATTGTCCAACCCAAATAGCTTCTTGTTC
AACCCAAAAAGCGTGactttcaagctaaagcaaccttGAACCAACATTTT
GTCCTACCCAGTCCTACCtgtaaaatctttattttgaccCTTGTGGTAGG
TCGTTTATCTGTAAGGAATATCAAAATTAGGTCACAGACAAGTTGTCAGG
AACTGAACTTTAAAATTGACTGGATATGCCATATATATATCCAGCCTCAT
TTTCAGAGTTCGCTGTTTTTTGATGGATTAGTGCAATTGTTTTGGCAGGG
ATTCTGATGCAATGTATTGCAATGCATTACACACTCACCCTTTCATATGT
TTAAGCTGGCTAAGAATGAATTATTGCTAAAAAGTATATATATTCTCTTT
TGTATCAAGGGAACCAAGGGAATATGCTTCTGCTGACCTAAATTTCATTG
GTTTTATtgctattttttagaaatatagaATATTAAAATCAACATGATGA
AATTATTTGTTCTGGCCAGCATTGCAACAGCTGCTCTGTGTATGACCATT
GAAAAAGCTGAATTAATTGCAGATGAAGGATGGCAATTATGGAAATCTAC
ACATAATGCAGCTTATGCGGACTTTAATGAAGAAAAAGTTAGATATACAA
TTTGGCAAGACAATGTTAGACGTATTACCCAATTCAATCGTAACAACAAA
AAGATGTCTTTAGGTATGAATCATTTTGGGGATATGACAACTACTGAATT
CAAATCGAAAATGAATGGTTACTTGGCTGGAAGCAAACAACAAGGATCTA
CTTTCATGACTCCAAACTTTGCTGAGATTCCAGATTCTGTTGATTGGAGA
AAAAAGGATGGATATGTTTCTGAAGTCAAAAATCAAGGACAATGTGGATC
ATGCTGGGCTTTCTCTACTGTAAGTTTTCGAATTCATCACTTGGCTGAAC
TGTGTTTGTTATTGGGAAAGCTAAGCTCCATTTAATTTAACTAATTTGGT
TACAGTGGGAGAGTCGTGTTACCCTCATGTTTGCAACAATAAAATTATGT
TGTTTTTTAACAAACAGCTAGGATTATATTTTGGGAGTTGCActagtttt
tccaaaaatttgtaaaatttaatgcttgacaaaattttcatacccaagat
ttttgccaaaaactcTTGTCTTCTGTAAAAACCCTAGGAAGTGGAAAGAA
ATTAGTTTCGGATGTCCAAAAATAAGCCCCACAAAAGTTTTTATCCACTT
CAGGTAAAGGGTTGTGTgtacagtataattgtttttcatCACAAAATTAA
TGTTTGTTGTGTCTGTTTTTATAGACTGGAGCTTTGGAAGGACAACATTT
CAGAAAGACCGGTCAAAAGGTTGATTTGAGTGAACAAAACTTGGTTGATT
GCTCTAAAGATTATGGAAACTATGGATGTCAAGGTGGATTAATGGACAAT
GCTTTCAAATACATCAAAGCCAATGGGGGGATTGATACTGAGAAAAGTTA
CCCATACGAAGGAAAAGTAAGAGCTATTTCTGGTTGCTGCAATATACATA
CATATAATTCAGTTATCTTTAATTAATGTAATATAAATGATTCATGGCTT
CTTGAATTGATAAGAAGGCTTTTAAAGTACGAAAATCTCTGAAATTATCT
TATTTGTTTAACCCGTTTTTCTCGTTTCCTTATTATTTAGAGACAGTAAT
TTTGAAGTCTTTTGAGGAGATTTCTATAATTGACTAGTTTCTGCTTGTTT
CAAATATCTTGTGTTTGATAACTGTAGATCCTTACCCATCTggcttttta
aataaaattattctcaattttttttacagaatcttCAATGCAGATTCAAG
AAATCCAGCGTCGGAGCTGACGATACCGGATTTGTTGATATCCCAAAAGG
CAATGAAGATGCTTTGAAGAATGCCTCAGCCACTGTCGGTCCAATCTCGG
TTGCTATTGATGCTTCACACTTCTCATTCCAATTTTACAAAGAAGGTGTT
TATGATGAACCACAATGCAGTAGCACCCAACTGGATCACGGCGTCTTGGT
TGTCGGTTATGGATCCATGAATGGACAAGACTACTGGATCGTCAAAAACA
GGTAAGAGTTGAACAAATTGATCCAATAAAACATTCTATCGTAACatctt
gaagaaaaaaatcgatttaAACAGCACACTAAATTGAAACTGCTATTGAA
AACAATCAtcgaatattttaaaatataatttaatgatttttgttttcttt
ctttttttagctGGGGACCAGGATGGGGCTTGAAAGGATACATCATGATG
AGCCGTAACAAGAACGACCAATGCGGTATCGCTTCATCCGCATCTTACCC
ACTCGTCTAAGATGTTTTTATACagcttttcgaccgtagccaccaattgc
cgcgcgggcatttttttgtccgctttatcccactaaaaccgtcccagtcc
cagtcttttttaatagacaaaagaaaaatgtgtGAAAAAAGGAGTGGCAC
GGGCCTGACTGTGCGACcacggtcgaaaagatgtattAGTGATGTTGTAT
ATTTCCAGGTGCCCTAAATGTTAATCTTTTCTAGGAACTGAAAACTTTTC
TTTCTGTTGACCATCTTTGATAGAGTTTTGGTTTCTGATAACTTCGTTTC
GTAAAAACTTGACACCtgggaaaattctttttgttttatatAGATGTTAA
CAAATAATTTCTTGTCAACGAGCATTTGTACTATTGATGCAATAAGCCTT
ATTTTGCTTagtatttaaaatttgaaaacgagtttttaaaaaaataggtt
aaaatagtaaaaaatccaacataaaaaagtatttaaaattttgacgttgt
atttttgtttttatttatcgCCGTTATGACGAAAgcttctttgtattttt
ttttctaatttttgatggaataaaaaaccctgaaaaatagtgataatatt
tcacaaaata
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_466 | supercontig | scaffold_466:255678..264637 + |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| CTSV | cathepsin L2 preproprotein | Homo Sapiens |
| CTSS | cathepsin S isoform 1 preproprotein | Homo Sapiens |
| CTSL | cathepsin L1 isoform 1 preproprotein | Homo Sapiens |
| CTSK | cathepsin K preproprotein | Homo Sapiens |
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