XLOC_041925 (gene) - C. hemisphaerica

Overview
NameXLOC_041925
Unique NameXLOC_041925
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_463:112336..120638-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041925 ID=XLOC_041925|Name=XLOC_041925|organism=Clytia hemisphaerica|type=gene|length=8303bp|location=Sequence derived from alignment at scaffold_463:112336..120638- (Clytia hemisphaerica)
TCTGCACAAATTAGAAGGTCCATACATTTCGAACGTTTTCTCTCCTTTAG
GCCCTCCGAAGCATTGTCCACCATTTTGAAGAGCGAAAATATGAAAACCC
TTGTGATTGGCTACTTGTGCACATTTGATGATGGGATTGGTCCGCTTTTT
GTATGAATCCGACAACAACGGATGGTTGTTCTCCAGAATCGGTAAGGCTC
TTTTTACATTGTTATCTTTCCAACATCCAAGATCTTGAATGTTTTCTATA
AAATGAACATTGTTAGCTTATTTAGGAGATAGGATACAGGATTTGTACAT
CCGTTACATGCTATTTTCTATTCAATTCAAAGGAGAAAATGGTCTTCCAA
GGCTGTGATGGACTGCGATACCTTGCAAATGAGATCACAGCAATCTTATT
ATCGTAAGGTAAAACCGTCCCAATCCTTTTTTGACGCGTTTTTATATTGT
CTATTGGTGCGAAAAAAGGACTGTTTTAGTGGGATAAAGCGGACAAAAAA
ATGCCCGCGGGACTACGGTTGAAAAGGTGTATTGATCAATACCATGACAA
AATAGAAACTCTTTTGATTGATGAGGGTGTTGGACTGCAGAACTCTCAAA
ATTTCCTTAGACATGCTATCTGATATTGCGGGGATATTACCTAGCGCGGA
ATGTTGTATGCCTTTCGTCTTTGTCCACAATAATTGCAAGCTGTTACAGA
AAATTTACCGTCCTAACTTTCTACTTATGGTCAAAATGAGACCTACCTGT
CTTGACTACAAGAAGGACCACTGAATACAAAACTGCACAAAAGAAAGCAA
TATTTTGAACCCCCATCACGCTGCAATCATGACGTCATTATTTGTGGCTG
TCAACCTGTCAAATCAATGCCATAAAAAACAACAATAAAAATTTCTACAT
GACAAAAATATATCTTTGATTTGTTTAATGATAAATTTTTTGCAGCTTTT
CTAAATTTTCATTTAATTTTTTTTTCGGTTAGAATAATTGTTTGTGTTTT
TGCGCGAGAAGTTTTCTCTCTTCGCTGCCGAGGTTCAAAATGAAAATATT
TTGCACGCATGAGCGAGCCGCCGTTCCGCTTGAATGATTTTCCGAATTTC
TTTCATTATTTCTCCAAACGGAAGAACCTTTTGCGAAAACAGAAAACTAA
CTGGAAGGAAAGAAAGGAAGGAAACAAAGAAATTTTGACTGAAAAATATT
TATTTTAAAGGTATGCAAACATTTCATTTTCTAAATTATTTCTTAGTTAC
AGTTTTTTGTTTACTTAGCTATTGTTAAACGCCAAAAATTTCCTCAAGTC
GATTAGCAGATTTCGTCTTCATTTTTCCATAGGGAATTGACATTAAGTTT
TTTTTTATAAGAACACCCAAAATTTTTGAAGCCTTGGGACGTTCTTAACT
TTTTGAGTTTTTAACTTTAAAAATGTTCTTAACATGTTCTTATTTTCACC
ATTTTTATCAATTTTCTTAAAAAACTTGGTGTTTTACAGTCCTCAAAGCC
TTAAAATATTCTTAACATGTTCTCGACATTTTATCCATGGAAGTCTTATG
TTCTTATATAGTTTGTTCTAATAAGAACGTATATATCAAATCGTGGAATG
GCCTCCTTTATACAAGGTGTCCGGAAAAAAGTATCGAGTCGTACCACTCC
TATAGAAAGAGAGTTCTTGTGCGTGTTTCACTAAATTTGCAATGTTTATC
AATGTTTCTCTCTGTGTCATATTAATTGTCATGGGACATCTTCTATGAAT
AACTTTTACTAAAAACAATTCCCAATAACTTTAACGTCATGAAGATTGTA
AAGATTCTTTTTAATCATAATGACTGTTGGAAAAAAATTATTGTTGTTGT
TATATATTTTCTTGCATTTTGTTAAACACACGCAACACCCTTCTACTCAG
AATCATGTTCGAGCTCGATACTTTTTTTCCGGACACCCTGTACATAGAAT
TTCAGCCACGATATTGCAAAGGATATGAATACATTTCTCCATGAACCTTT
TTATAATAGGTGTCAATCAAAGATGTTGGAAGGGCGTGTTCTCTCAAAGA
TGTTGGAAGGGCGTGTTCTCTCATATCTTACACTTCTTTTCTGTTGCATG
TTGGGTAAGTACACCCCTGTCTCACAGCCCCCCCCCTGGTGGGGCTTTTT
TCCTCAGTGGAGATAAAGATTTCTATTGAAATCCCAATGTGGATAGAAAT
TCCTTTGTTCCAAAGTTAAAAGATCCAGTGGGGATGGCTTTGGTGTACAA
TTTTTTAAACATTGAATTTCGAAGCAGCATTTGTATCTTTTATGTATGAA
ATTTATGTTCATTTTTGATCTCATTACCTAGCACACGGTCTCGTTCCTGA
ACTAGTGAACCGCGGACGAACGCGAACTGTTCCTGTTCAAATGGACATGA
TTTCAGGTGAGCATTATGGATTCTCCCTTCTTTTTACTTTTCCCCTGTAA
GAACTAAAGCTACAAATATTACAAGGCTTTGTTTTCACTAGGAGGGCCGG
GAATTACTACAACCCTCTCTCAGTGTCCCGATTGTCATACTTTAGGTAGT
TTGGATGGAATATCTTGTTCTTATTGGATCGGGGTCTCAAATTATATCAG
TATTTGCAGCTCAAGAAATACGAGACCCAGCTGGCACACAACGTTGTGTC
AACGTTCATCTAACGTACACAACGTCCATATAACGTTAGATAAACGTTAA
AACAACGGTATGTGGGGAATGAGATGTTTTCCATCGAAAGGATTATCTCA
ACCTTTTTTCCATCGGAAACATGAAAGTATAAGGGGATATATTTTTCCTN
TATGTGGGGAATGAGATGTTTTCCATCGAAAGGATTATCTCAACCTTTTT
TCCATCGGAAACATGAAAGTATAAGGGGATATATTTTTCCTGAAATGGAC
AAACCTTTTCTATCTCATTTACAGATAACAGTATTACAATATGTACCGGC
GCCAAAAGGTCGTTAGCGTGTCGTGAAGGAGCCAATATTGCGGTCACCAA
TGTATTTTGGGGCCGATTATCGGACAAAGTTTGCCCATCGGACGATGGCG
ATCCTATTGTTGATTGCGATGCGGCTCCCGATTCATTAGGCTTGGTCCGC
GATCAATGCGAAGGAAAGAAGGAATGCAGTCTAACTGCTAAACACAGGTA
CGATAATACAGTAACCTTTCGTTAAATCAATTTTTTAAGCTCTAACCTTA
TTCCTAATTTAGAAAAGCTTGTTTATAAAAATCTTTGTTTAACTAACCGA
TCATTGTAAGAAACAATTGATCTATTAAAAATCTTGATTGCGGGTCAGAA
AAAGATTTCCAGATCAAATCTTTAGTACATTGAAAGCTTTTGGAATTAGC
GTTCTAAAACAAAGTATAATAGTCAAATATGACATGGTTTCCACCTCTGA
AATGTTGACGGATAACCGGCGAAAAAAGCTTTCGCCAAACGAATTGCCGA
TCTCGTACCTAGAGATACAATCGAAATCGCTATCGGAATCATAAAAAAGC
GAACTGAGCGTTTGGGTTTAAGACCACGCTCACACGCTAAGGTTCCGTTT
CGCTCCGAAACGAAATGAATTCATTCTATTGGTTAAATTGAAGTTTTACG
TCACTTCTAGTCAATCCAATAACTTCATTTCGTTTTGGAGTGAAACGGAA
CTGTTATGTGCGAGCCTTAAGTTGAACGAATCACTATATTTTCGGAATAT
CAAAAGTAATAAATAAATACTCTTAGGTGCCAAATAAACGCCCCCCCCCC
CNAAACCCCCCCCCCCCCCGCTTGTTAATTTTTCGATTTTTTCCAATCCC
CCCGGACCTTATTAGGACCTCCCCTGTTTATTAATTTCTAAAAAAATTCC
CAGCTACAAAAAGGAAAATTTCTTATTTTACTCTAAAAAGCCTAAATTTA
GTCTGTTTTGACCCTTTTTAGGGTTTTTAAAGGTCCAATTTCCAACCCCC
CCGGTAATTAGAACCCCTCCCGTTTATTTAATTTGGAAAATTTTTCCAAC
CCCCCATTTATTCGAACTCCCCCGTTTATTTGGCACCTAAGAATACAAGC
ATTCGTTGTGTATTTTCTTCAACTTTATTTCTTTGCAGCTTATTACAGAG
AGAACATTCATCACATTGTCCTGGTGTCAACAAATATTTGATCGTCAAGT
TCACTTGTATGCCAGAATCAAAAGGTGTTTTGTTGTGTGATTCTGCCGAA
ACTGATATTTCTTGTGAGGCTGGTTGGATCATGCAGTTGGCTGATGTTTT
CTGGGGTAGAAGGTATTGAGATTCTAGATTCTAGATTCTAGGTTTAACTC
TGTGGCCATAGTAAAGGCCGGTCTGAGCGAAAGCTTTTTGACGTTTTTGT
AAGGTCATTGGTCGGTTGAAAAATGAAGCAATCCCATTGGTCGAAATAGA
GGTAACGGATGAAAAAACTTTTTTTTTGTTCGTGCGAAATTTTTTTAAGA
CGTCATCTTTTGTTCAGGCAAAAAAAGGTTAAGAAAAAAGCTGTCGCCCA
TTTCGCGCGAAAGTAGAGACCGGCCTTAACTCCCCAACTAAAACCTTTAA
ACTCCCATGCCCAAAGAAGAAAAGACACAGTATTACTTTCTTGGTAATTT
GGTGTTAAGGTTTTTCAGCAAAATACTTCTTTAAATCAAGATCGAAGGTT
TTAGTACAGGCTGGGTTTCCATATTGCATCATGGAGCTTTTTTTTCTTTA
AGTGCTCTCCTGTTACAGTTTTTTGAAGTTTGTAACAGAAGTTGTAATAA
ATTGTAACTTTTAAGAATATATTTCGTGGAATCGCATTCAAAGCTAGTCT
GAATCGCAGACCTCTACAAAACCCCAGGTAGTATAGGTCTGCTTAATGAT
CTACCAACCGCTTTCCGGTTCGCATAGGAAATCTTGGCGAGTTAATAATT
TGATTGACATTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCCAAATATATTT
TCCAATCTATGATTTGGTGCCTCACAGAAAATTTAAACATTACGTAATGT
TATATTTGTAGACACTCGCCAGCTAAACATGTCTTTAGCCATATATCGGC
TAAAGGCGGCAAATCTCTGGACAAAGGAAATATAGCTTATTAAGCATCCT
CTATAAGGAGCACGAATCCGTTAGTGGATGCCAGCAGCCTAATTCAAAGC
TGCTTTTTAAACTTTTTTCACAGTGAAATTTGAAATTTCCGCCAACTAAA
AAAGGTCATTTTCCATCCCCTTGACATTAAGCTCCGACGCGTGCAGCTCC
GGCATCTTTTCTGGCTGAAGATTTTCTCACTGATACAGTACACTCTTTTT
TGTAAGCAAAACGTTTAAGCATACAAAAGTTCGAAGTTTCTATAAACCCA
AAGAAAATCAACAAGTCGAAGTCTAAGCATATAAATTTAAGCAAAAATCA
AGGTTGAAAATGAGATTTTGCTAAGCATATTGAGCCTCGAAACGATTTTC
CCGTATGCTTATAAAAAAAGAGTGTAGTGTTGTATCCACTGCTAACTTTC
GTGTTTTGTTTACACAGAGCGTCTGCAAGAACATGTGGCTTAAACGAAGG
CTTCGAGTGTGATGCGTCAGAAACCGCCTCCAACTACCTCAAAAATAAAT
GTAATGGAAAACAAAAGTGTTTGGTTCAAAATGAGGCTAACATTTTAGAT
CCTACCAAGAAATCCAGCTGTGGAGACTCTCTGGAGAAATATTTGATGTT
GAATTATGTTTGCAGTCCTGCCACAGCAAGGACGACCGCTCAACGTAAGC
ATGTTTTACACATAGATTTGTAAAGCAAAAATATAAACTTTTTTCAAGAA
GCTACCAAAGGCCAGATGTCCACAGCAAGATTGAGGGGAAAATGGTGCTT
ATACTTTTATTCGGAAGCCTAGAAAATCAGCAGAACCCTTCAACAATCGA
TAACAGGTCTAATATTCTCGATAATGTCCAAATTTTATGTCCCTTTGGGA
GGAAGTCGACTTCTAATATTTTGGAATTTTGGGATTCTTTCAGAGATTTT
CGAGGGTTTAGAAAAAGAACCCTTATGGCTCGCACATACCTAGCACTCAT
TTTGGCCAAGAACAACCCCCCTGATTTCACAATCCTTCCACATTAAAATA
TTTTGTTATTTCGTATTTTCAGAAGACGATGATGAAGAAAAAGAAAAAGA
AAAGAAAGTTCCAGGTACTAAAATTGTCTGTTTGTCTGTTTTGATTGTTA
GGAGCCTTTTTTATGATGTCTTCTGATGAAATCAATAATGTTAGCAGTTA
GTCGATTTGTTGTCTATATTAAGGAAAACATCTCTATGGCAATAAACTTA
TATTTAACTAGGGTATGTAATCAAAATGAAGGATGTTCGGTCTTCTTACA
GTTTTTAAGTCCTATGGTCTTCATTNCTAGAGTAATGTGATCAAAATGGA
AGATGTTCGGTCTTCTTACAGTTTTTAAGTCCTAAAGTCTTCGTGTTTTT
GACTTTTTAGACGCACCTAAAGTAGCAGAAAAGCCGAAACCACAAGCCGC
TGCCGCCATTGTAAACCCCGCCCCTAAACCAGCTGTTCCCACCGCTACAA
ACACTGCAAGTACTTTATTGGCGGCGGCAAACAGTGGAAAAACAACGACA
TCGAAAACATCAGGAGGATTTGCGCCGAAAAATGAGAAAAGTGAAGTGGA
AGAAGAAGCAGAAGAAGCCGAGAAGAAATCTTCATCAACCTCCTCCTCCT
CCCCAGCGAAAGAAAGCTCGCCTGATGCAACCTCAGATACAGCCTCTGTT
CGCTCCATTCTCTCACGGGCTAAAAATATTCTCAAAACACTCGATATTGA
TGGAGGAGACGTCCGCAAGAAACGTTTCCGTATTGCAAGACCGGAAAAAT
CAATTTCCCCTCTCAAAAAGAAATTACAAAAGAAATCTGATATTGTTGAA
CGTAGAAAGAACTCAAAGAATGAACAAAAAATTGCGCCTCCGTCTGTCCC
AGGGCCTGAATACCCTGATAACTTCATCCTCAAAAGTTGGTATGGGAAGT
AAACTGAATTGAAATCTTTTGGCTAAACACTTTCGTAATAGTCGGAGCTT
CTTTGACTGGGGACTATTACCGGACTTTATTGAATTCACAGGAAGACAGG
AGGAGAACTTTAATAAGCTCGCGCTGAAATTACCAATCAAGATGCGACGG
TTTTGACTACTTAAAAGTTCTAAACGGAACTAATTTTTTTTCACGTGGTT
CATGTGGGCTATTGACAGTAATATTTTTTTATATAAATTGAGAGAATTAT
ATTTTTATATGACAGAGTCTGTAAATATTGCTATTAGTAAGGGTAAAAAC
TAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00067104TCONS_00067104Clytia hemisphaericatranscript
TCONS_00067103TCONS_00067103Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00067104-proteinTCONS_00067104-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_463supercontigscaffold_463:112336..120638 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51	0.36	0.19	0.16	0.03	0.07	19.37	20.56	11.18	8.78	14.9	11.15	28.33	23.67	18.28	43.89	29.04	27.21	0.34	0.17	16.11	16.14	12.91	13.89	22.48	29.67	2.09	1.03	0.31	0.63