TCONS_00067104-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00067104-protein
Unique NameTCONS_00067104-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length465

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00067104-protein ID=TCONS_00067104-protein|Name=TCONS_00067104-protein|organism=Clytia hemisphaerica|type=polypeptide|length=465bp
MVVLQNRCQSKMLEGRVLSKMLEGRVLSYLTLLFCCMLAHGLVPELVNRG
RTRTVPVQMDMISDNSITICTGAKRSLACREGANIAVTNVFWGRLSDKVC
PSDDGDPIVDCDAAPDSLGLVRDQCEGKKECSLTAKHSLLQREHSSHCPG
VNKYLIVKFTCMPESKGVLLCDSAETDISCEAGWIMQLADVFWGRRASAR
TCGLNEGFECDASETASNYLKNKCNGKQKCLVQNEANILDPTKKSSCGDS
LEKYLMLNYVCSPATARTTAQQDDDEEKEKEKKVPDAPKVAEKPKPQAAA
AIVNPAPKPAVPTATNTASTLLAAANSGKTTTSKTSGGFAPKNEKSEVEE
EAEEAEKKSSSTSSSSPAKESSPDATSDTASVRSILSRAKNILKTLDIDG
GDVRKKRFRIARPEKSISPLKKKLQKKSDIVERRKNSKNEQKIAPPSVPG
PEYPDNFILKSWYGK
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_041925XLOC_041925Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00067104TCONS_00067104Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000922Lectin_gal-bd_dom
Vocabulary: Molecular Function
TermDefinition
GO:0030246carbohydrate binding
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
molecular_function GO:0030246 carbohydrate binding
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450Score = Score = Score = 11.708Score = 9.527SequenceCoilCoilmobidb-litemobidb-litePF02140PS50228PS50228
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 421..441
NoneNo IPR availableCOILSCoilCoilcoord: 345..365
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 413..455
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 266..383
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPFAMPF02140Gal_Lectincoord: 77..161
e-value: 2.2E-15
score: 56.7
coord: 178..261
e-value: 1.2E-8
score: 35.1
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPROSITEPS50228SUEL_LECTINcoord: 69..162
score: 11.708
IPR000922D-galactoside/L-rhamnose binding SUEL lectin domainPROSITEPS50228SUEL_LECTINcoord: 170..262
score: 9.527

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00067104-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400450Sequence
Match NameE-valueIdentityDescription
back to top