XLOC_041838 (gene) - C. hemisphaerica

Overview
NameXLOC_041838
Unique NameXLOC_041838
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_462:70537..76922-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041838 ID=XLOC_041838|Name=XLOC_041838|organism=Clytia hemisphaerica|type=gene|length=6386bp|location=Sequence derived from alignment at scaffold_462:70537..76922- (Clytia hemisphaerica)
ACGGTGTGAAAACGATCGATTACGCAGGAGGTCGAGAACACGAAGATTTC ATTAACTTCATGGTAGAGTAAGTGCTTCGATTTTTCACTTATTTCCCATT CAAAACGCGTGACTCGGGTGTTTTTCACTCAAACGCCAGATTGAAAGTAA AAACTATCGCAAGATTTTGAAAAATTATGCCGCAAACAAGGAAAGCACTG GATTCGTCATTCCAAAAGCGTCTTAAATCTTAAGGCTTCACTTTTTCTTG CTTGAAAAGGTTGAAGATTCCTCTCCAGCCCTTCGGGCTTTTATGAAAGT AGGACATCAGAAATGAACATTCCTGTATAAGTCAATAGATGCAAAATAAA GTAAATCGAACGAGTGATTGAAAGCACAGGGAACTATTGTTGAATTGAGA ATATTATTTATTATAGTTAACGATTCCAAAGGCTTGAAGCAGACCACGTG ACCTGACTTTGTCATGAACAACCCCTGATAAAATTTTAGGATCACCAAAT CATTGAATAACTTTCAAATCTATATTATTTGTTTTATTACCATAGCCCAA AACCACCAAAGCCAAAGCAAGTGGAGAAAGATTGGTCAGATGAAGTCAAG GACGTCGTCTTCCTTGAGCCGATGAACTTTGACGATTTCGTTGAAAAAGA AAAATCCGTTCTCGTCATGTTCTATGCCCCATGTAAGTTTTGTTTGGGCG AAATTTTGGATGTGTAAACTTTTTTAAATTAAAATTCGATCCCTTTTTGC CTTAAAATTTGTGTACAGATTTCAACTCTAAAACTTTTTTGAATATCATA AAGAGTATGCGTTAGATATAATCTGTGTTCAGTGCTGATGGATTGACATA TAGTAGAAAGGCACTTATGGTGAAAATGAAACTCTCTTTAATTTGTTTTC GTATAAGTTCTTCACTGTTCTTTTCCAAATCAGGGTGTGGTCACTGCAAG AAAATGAAACCAGGACTAGCTGAAGCTGCCAAGATCGTCAACAATGCTAA TGATGTACGGGCACTTTTTATCAATATCTTCACTTTGTAAACCTAAGTTA AATCGGTTCTAGAACTTAAACAGTTGCAGGCTGAACTTATTTTACCCTCC TTCCATGGGCCAAATACCATGGTCAGCTGGCTTAAGCATTTTAGACCTAA GGCCCTTGTTTCAAAAAAATTTATTGGCCTTTTCGACTTTTTTCATGATT TGTCGAAGAATTAAAATGCAAACAAATGGTTTTTTAAAGAGTCCAATCAG TGTAGACCTAAAGCTCTAAACCAGCATCTAATAACATGAAAACCAGAATA TGATTCTTCAATGGGAATCAAAATATAAAGTGCACTTACAAACATCAATT TGTCAGATCTAACAAAATTAATAACCGCACTGTCATCATTGACAATAAAA CAAACGATTTTCTGTCAAGAGCCNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNCGAGAACGCTCCGCGGACTCCTGCGCG GGTGAAAAACTTTAATCTGTCCATCATTTTCTCAAGCGAAGAGTACGCGA AGCGATTCTAGCCTTACGATAGTGCCGCGGGTCATCAATGGATAGTATTC AATTATCATTATCCCTATATTTTCATTCCTAAAACTTTTCCAAAAAAAGG AAAAATAGAAAAGTTGTATTTTTTACTGTTCTATTCACATACTGAATTTG AAAGATCTTCTATGTGGCGTTTTTTTACAAACTTCAAAAAACTGATTTTT GTTCCGCCTTTGCGGGACTTTGGCTTAAGTGCTTGAGTGCAGCATAGGGT ACACAGTCCAAACATGCGTTTCCCGTAATTTTTGTCTGAAGAGTTAGGTC TACACTGCCAATCAGGGGGTCTTTTTTCATTTTTCCGAGGCTTTAAAAAG TCATTCTAAAATTTCCACGGGGTGAAAGTCTGATTTCAGTTCGTCCACCC TCATTTTAAGGTATGAAAAGATTTTCCTAGGGTACTTGTGCAAACTTCGA TTCAATTTTCAATAGTTTTTTTTTACTTGAAAAAGTTCGTCCACCCCCCC CCCCTTTNTTCAGTTCGTCCACCCTCATTTTAAGGTATGAAAATATTTTC CTAGGGTACTTGTGCAAATTTCGATTCAATTTTCAATAGTTTTTTTTTAC TTGAAAAAGTTCGTCCACCCCCCATGTATGGTTTTTAATGGGACAGCTTA ATATGAAACTGTAATCTTTCCCTTTCAGATCGTTGGAAAGATAGCAGCGG TGGATTGCGTTAAACACAGTTCGTTGGCTGGCAAGTTCGAAGTAAGCGGA TATCCAACATTGAAATACTTCAAAGACGGAAAAGAACAATTCAAATATAG AGGTCAACGAACGAAAGATGCCCTCGTCGATTTCATGAAAAGGTAACCAA ATTCTTCTTTCTTTCATTCTGTTTTTTTCTATTTGAAAGTTTGATCAGAC TTCAACTTCATTTTAGCCTAATTTTGCGAATGTTTGAGTCTACAGGCCAT GGAAAGAGTCTAATTTTGCTTAAGATTTTCACGTTCATTGCTTATGTTTT CCTTGCAAAATTGTTCATAATAATGAACTTGGGTGAGCGTGGTCAGCATT TTCGATCTGACATATCTTTTTTCTAACGAATTTTAGAATGAATTAGTCTG GATTAAAATTTGTTACCCTTTTTAAATTACCTTGGAATGCTCTATCTAGT AAATAGTTGACGATTATAATTTTACTTTCCAGCCCTTCTGAACAAGATTC ATCAAGCAATCAACCACCACAAAAGACGTGGGCCGAAGAATCAGAACACA TCATTCAACTCAACGATGCCACATTCACCGAGTTCATCCGAGACAAAGAC GTCTTTGTCGCTTTCTATGCTCCATGGTGCGGTCATTGCAGTACCATGAA ACATGCCTTCTTTGAAACTGCAAAGAAACTGAAAGAAGATAATTTCCCAG CCGTTTTGGCTGCTGTTGAGGCCACACAGAATAAAGATTTGGCTAAACGA GAAGGAGTCAAAGGATATCCAACATGTGAGTTCCTGTGCTCTTATTGAGT TACACATTTTATTCATATTGTTTTTGAATAAAACGGTTTCTTGATCTAAG AGGACTAAGCTACCCTAAATGCTAACACCATAGCTTAGTAGTGGTTAGAA TTAAATTGTTTTAAATGTCGTATGATTAAGGCCTGTCTTTAACTGTTATG ACCCCTCCCAACATTTATTCCCCTTTTTACTCAATGTATTCAATATTTAT CAATATCAACTATTGAATAATCTCTCGTCTTCTTTCTTTCGTTTCAGTGA ACTTTTACAGGTAAGTTGACATTTTCATAGTTTCATTTATATCATACCGA CCAAATTCCACTAGTTTGAGTTGAACAACTACTCTATTCTCCAGACAACA TTTGTACGGCGTGCTGCCAAAATTACACTTTTTTGTAGCTTCCACATAGA ACAGTGTTGCTTTCTTCAAGATGATCATTGTTACCATTTCCTTTGCTCGT TTATATTTGTCCACTTTGCCCCGACATTTTAATATCTGTTTATCTCTAAA TGGTTTCACAAAGCTTTTTGTTTCCTATGAATCAAACATGATATTTTTTC CCTTCAAAGCAATGGTAAATTTGTAGTGAAATTCGAAGAGCAACGGACGG TGGAAAAAATGTATGCATTTTTACGGACGCAAGCCGAAGGAAAAGAACGA GAAAATCGATTGGACCAAGAGAAATGGGAGGACCTTCCAAGCTCTGTGGA ACATTTGAACGAAGAAAACTTCCAAACGTATTTACAACAAACCCAGCATG TGTTAGTGGCTTTCCACGTCAGGTGTAAGTAATGATATACGCTTTCATCT ATACTAGCTGCGTTTTGTGTAGAGTTTTTTTCACTCAAAAGCTAGTCTAC TAGGCCTCTCATATTTTAGGGTTTTTTTATTCTGATTCTGATCACTCCAC GCATGGTACCTATTTACTCCAAATGACATGTCTTAGTGAAAGATACTGCG CAGGTTGGCAGACCGCTTCGATCTTTTTCATCAAAATTTTGGATGATTGG CTGGAGTAAAACAATCGTCGATCATAAACGCACCCAGTCGCTTTCACATT CATTTTCAAGTTAAGAGTAACGCGATTTTTATTGTTTTTTTTTATGTCAG ATCATCACATTCGCCATAAATCTCTTTAAAGCAGAGCGTGTCTTTTAACC CCCATTGTTTTGACCTATTCGAAACTTCTGGGATCGCAAGATGGATAAAG TTAACCATCTTTTAAACATCTATTTCAAGGTAGGACCGGAAGGTTGGGTG ATACCTGGGAAGATACTATTATATCTTAATCTTCTAATTAGTAAAATCCT CGAACCCTTGTGTTTAGACTACGAAAGTACGTTTTCATATTTGTCACTAC TGTTCAATATCTCAATTTTTGTTTTCCTCATTTTCGTTCAGGGTNGTGTT TAGACTACGAAAGTACATTTTCATATTTGTCACTACTGTTCAATATCTCA ATTTTTGTTTTCCTCATTTTCGTTCAGGGTGTAAAACATGCGCTACTATG CGAACAGACTTGATGCAAGCTTCTTCACGATTGGCTGGACAAAAGGGCAC CTTTGGAATCGCCGCTCTTAATTGTGATTTATATGGAGGTAAGAATGAAT ATAAGTTTTTAGTATCCGATTACTGTGGTTTGGTATTAAATAGTTTTTTG ACGAACAAATATGATTCTTACTTTCAGCATTTAGTTTTTTTAAACAAGAT ATATTTTGGCAACATTCGACGTCGAGTTATAATCTCAGAAATCTTTCCTC ATATTTTTCGAAAAATCTTTCGTCAAAACATCTTCTGTCAGATTTTATTA TTAATATTTTTCATCAAGAATTCTACGAATTTCTTTCGTTAAAATATTTT TCCAAAAATATTTCGTCAAATATTCTTTAAAGAAAATCGTTTATCAAATA CTTTTCAAAAAAGATCAAAAATCCTTCTTTAAATAATCTTCCAAAAATTT TCCGTCAAATATTCTTTAAAATTTTTCAAAAATCCTTCGTTTTCTCCAAG AATCTTTTTTCAATTACTCTTCCAAAGAATTTCGTCAAATATTCTTTAAA AAATTTCGTCAAATATTCTTTAAAAAATTTCATCAAATATTCTATGGAAA ATTTCACAAATCATTCGTCAATTACTCTTCCAAAAATTTTTCGTCAAATT TTATTCAAGAAATCTTTCATCAAATATGTTTAAAAGAATTTTGCGTCAAA TTTTATTCAAAATGACTTTCATCGAATGCTCTTTCAAAAATCTTTCGTCT AATGCGCTTCAAATAATCTTTAGTCAAATATTCTTCGAGTACTCTTTTAT CGAATATTCTACCAAAAATAGTTCGTCAAATTTTCTTCACAAAATCTTTT ATCCAAAAAAATCTTTTAAATTATTTTTCAAAGATTATTTTTTCCAAATA TATTTTGTGCCTATTGGTCGTTTTTTTTCAAATCTTATTCTAATTGCTCC ATTATTTTTTAGATTATTGCAACGAGCAAGGTGTAACATCATTCCCAACA ATAAAATATTATAAACGAGGTGAATTTATGGAAAATTATTCCGCCTCCAC GACTGCTGATGACGTCACTAACTTCTTACAGACACGTCAAAAAACGGAAC TGTAATAATGTAGATGGGGTCTAGTAAAATATTTTTCTAGGAAATTAAAG CATGCATGCATTTTCATATCGTGCTAATTTTTTATATTGATAGTAACTTT TTAGTGCTAATTCTTACTACTAACCTTTTGAATCACTTTCTACGCTTTTT TTCGGAAAGGTAACACTTTGTTAATCATGGCTTCCGTTACTCCCCCCCCC CTCAAATAATTTGCAATATATTCCAAATATACCGTTTAAGGGGGTAAAAT AAGGGTGAAAAATCGGAAAAATTCATCTTCGCCGTTTAACCACGGTGGAA GAGTTTTTGGCTCAGTTTGGCCCCTTAATCTGATTTGCATGCCGGGTGCC ATGGTAAGACGAACCTTTTGAATTATTTTGGTCAAATGACTGGATTTAAA ACTTTGGCAAACCAACTAGAATTCCCAACAGCTTTATAGATTTTTCTCTT AGGGAATATAATTCCCATCCGATTAATTCTTTGGTGTAGGATACTAAGCT CACTTCTAGGGCTTTAAAAATGTTTAAATTTTATCTATATCTTTATTGTG TTTAATGAATTTTTATAAACATCCTTCAAAAATAAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066944TCONS_00066944Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066944-proteinTCONS_00066944-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_462supercontigscaffold_462:70537..76922 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
61.69 57.84 41.11 41.75 182.52 142.5 124.92 126.69 99.78 112.15 80.36 126.51 74.01 74.9 99.09 120.25 78.83 78.09 42.44 54.97 43.74 48.69 58.16 58.66 37.27 41.65 33.9 28.12 104.69 77.59