XLOC_041627 (gene) - C. hemisphaerica

Overview
NameXLOC_041627
Unique NameXLOC_041627
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_456:164064..168805-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041627 ID=XLOC_041627|Name=XLOC_041627|organism=Clytia hemisphaerica|type=gene|length=4742bp|location=Sequence derived from alignment at scaffold_456:164064..168805- (Clytia hemisphaerica)
CTTCTATGAAAAAAATGCAATAAGCTCATGAAAGAAATAAAAAACAACTT TTTACCATATGAATCCGATTAAAATGGGTGTGTAACAAAGAAATGGAAAA AAAATGTTCATTATCAAAGGCATACTTTTAAATTAATCTAAATTTTCTTT TGTTATGCTTGAAGTGATAAAATAGAATTTCTAAATTGTGGGATCGTCAG TTCATATTTTGAGCATCAACAAGCAGTGATTCAACCTTTCACATTGGTTT TGTTGTAATTTAAGCTTGATTCAGGTAAGTTTTTTTTCAGCTATTTTCCT TATGTTTATTTGAATTTAAATACCACCCGTCAGCTCAAAACCCTTCTTCC CCCGAGAGATTCATTTTATTTTACTTGAGAAAGTTTGAAGATTCCTTTCT AGCTCTTCGCGGGCAATAAACTCAATGAATAATTTTTTTTTCAAATCATT TGAGACAGTAAAGACGAAAACGTTAACATCTTTAACGACATTAACGCCTT CTGAGTAGCCGTATCCTATGGCAAATTTTACATTATTAATGTTGTTTTGA AGTACGTTGTCTTTGTCTTTTCTTTGTTGTTTCACGTAGCGGACTTGCTC GCCAGAAAAATATTCATGCTCAGCAGATTCATGTTGTTTCTTCCGATTCT GAGCGGGCCGCCGCGGTTAAAAATGTTTGCGCGCACCTAATATTATATCT CTTTTGTTGCTACTTGGTACTTTATAGGAATCAAATCAATAACTCTTGAT TGAAGGCCATATACCTTTCGGTAATTAGTTCTTAGAAAGTAAACAAAGGA TGGCGAAAAAAATGAGCATATTTATTTTTATTATAAGCATCTACTTTATA AGAATCAAATCAATATCTCTTGATTGAAGGTAATATGCCTTTCGGTAATA AGTTCTTACAAAGTAAACAAAGGATGGCGAAAAAGATGAGCATGTTTATT TTTATTATAAGCATCTACTTTATAAGAATCAAATCAATATCTCTTGATTG AAGGCAATATATCTTTCGGTAATTAGTTATTAGAAAGTAAACAAAGGATG GTCAAAAAGATGAGCATATTTATTTTTATTATAAGCATCTACTTTATAAG AATCAAATCAATAACTCTTGATTGAAGCCAACATGCCTTTCGGTAATTAG TTATTAGAAAGTAAACAAAGGATGGCCAAAAAGATGAGCATATTCTTTTA TTATAAGCATCTACTTTATAAGAATCAAATCAATAACTCTTGATTGAGGG CAATATGCCTTTCGGTAATTAGTTATTAGAAAGTAAAGAAAGGATGTGCT CATCTTTTTAAGTGTCTACTTTATAAGCATCAAATCAATTTTCAGAATTT TTGGCGTTTCCACTGTGATAACATATGAGCGATACCTTCTCTTTTTGAGA TGTGAACGACCGTCCATCGCATGTCATCTCAAAAGTAAAGTTGAAACCAA GCTTTCTTCCTCCGACTTAAATTTTATCGATAAAACGAATTTAAAATCTA CACATGCGTTATGTTGCTTACTTAGGGATATTTCGAAAGGAAGCTCTGCG GGGCATTCTTAGTGACAGCTACTTGCTAGTTTTAATTTAAACTGCCTTGA AGATTTGCAATATTTAATATCGTTTTGAAAATGATTCAGTAAGGTCATCG AAAATCGACATCTATTTTACATGACATTGATTTGAATGCTCAAATTTCAA ATTTAAAGATACACCTATTCAGAATTTGTTATGAACTTTATATGCTAAAT ATATTAACTGGATAAGGACTATAACTAGAAATATTAAAGGGATTTAATAA AAAACTTGCATAAGCCAACTTTGATTTGATTTGATTTAATGCTGTTTTTT TTTCAGATTTTTGTCAATATGGTGGATGTGAAAAAAATTGGAGTAGTAGC TGCATGTGCATTCGTCTTTATCCTTCTTTCTGCGTCAACTGGTGGCGTGG GATGGGTCACATCTGAAAGTAAGTTAAAAATAAAATTCTTTCTTTACATT GAAATTGAAAATATATTAATAATTTTTGTTTTTTATAAGCTCGGGTAAGT TTATGGCATGTCTTAAAATTACCATAATTTTTAGATCACATTAGTCGACA GAAAATGACCAAACAAATGACTGAACATGAAGGGTAGTATGATGTAGTTT CTAGCCTGATGTGTAACCTAATTGTTTTTTCTCTGATTTTCGCGAAAAAC CGCAAAAACTGATTATTACGTAGTAATCGATGACGTCATCAAAACTAAAA ATTGAATTTCTCAAGAATGGTTTATCCAATCGTCTTCAAACTTTCACCAA AGATGTATCGTACTAAAGTCGATCATTTAATAAAATGATTTTTTCAAAAT TTTGATGACGTCAGCAGAAAATAGGATTTTTCGTTTTTCACTAATTTCTG CTGACGTCATCAAAATTTCGAAATAGTTTTTTTTTCAAATGATCGACTTT AGTAAGATACATCTTTGGTGAAAGTTTGAAGACAATTGAATTAACCATTC TTGAGAAATTCAATTTTTAGTTTTGATGACGTCATCGATTATTACGTAAT AATCAGTTTTTGCGGTTTTTCGCGAAAATCAGCGAAAAAACAATTAGGTT ACACATCAGGTTAGAAACTACATCATAATACCCTTCATGTTCAGTCAATC GTATGGTCATTTTCTGTCGACTAATGCGATCTAAAAATTATGGTAATTTT CAGTTTTTGAGACATGCCATAACTTACCCGAGATGAACAAAATTTTTAAG ACCATAAGGCTTCGATAGTCAAAATGTTAAGAACAAGTTAAGAACATTTT AAGGCTTTGGGGACTCTGAAACACCCGATTTCTTAGGAAAACAGACAAAA ATACCCACGAAGTGGTGAAAATAAGAACATGTTAAGAATATTTTTAGGCT TAAATCTCAAAAAGTTAAGAAAATTCAAAGGCTTCAAAAATTTTGGATTT TCTTATGAAAAAAACGTGTAATATTTTAGAATTTTAAGTTTTGGGCAAGA ATGGCGATTCCAGCACTTCAAATTTTTTTTCATTGGACATTTCGAATTCT GAGGGATTCAGTGGCTGATAGGTCATATTCTCAGCTTTATTGAAAAAAAA ATTAAGATTTTGAATCCTAAGATACTAAGGTTTTTAAAATGTACAGGGAA CTCGCGGTACAGAACCCATTATAAAATTCGATCATAATATTTGATAAAAA GGCGAGATTGACTAGGCTGCACACATCCCCTCTGATAAGTTTTGATATAT CAAAACTAATTTAGGGATGCATGCAGCCTAGAGATTGACATGCCCAATAT GGATCTGTAAGCCTATCTGTAAGAATGAGAATATCATATTTCACGTATTT TTTTATAAGAACAAACTATATAAGAACATGAGGCTTAGATGACCAAAATA TTGAGACTAAGTCAAAAACATTTTAAGGCTTTGCAGACTCTAAAATACCG AATTTCTTAGAAAAATAGACAAAAATACTCAAAAAATATTTTTAGGCTTA AAAGTTAAAAAAGTTAGTTAAGAACATCCAAAGTCTTGGATATTCTTATA AAAAACGTGTATTCTGATAATCTATCGATTAAAGTAACATTACAGATTGA AAGTTAGATAATTACTTTTAGACGGTTGGAGTTCTTTTACTCATCANAAA AAAGTTAGTTAAGAACATCCAAAGTCTTGGATATTCTTATAAAAAACGTG TATTCTGATAATCTATCGATTAAAGTAACATTACAGATTCAAAGTTAGAT AATTACTTTTAGACGGTTGGAGTTCTTTTACTCATCCTGCTTCTTTTTTT GTTTTAGATTTTGGCATTGAAAGTAGTAGTGGCTTGTTTAGAAAATGTAG AAAAAGTGGCGGTGCGAGCAATTGTGCAGATTTAGCAAGTGACCAGCTTT CTGACAAGGATAAAGCGGTTCAAGCATTCATGATCTTGTCTGTGTTAACA TCCATTGCAGCTGTTGTTTTTGCTATCTTACATATGGTCACTGACAAAAT CCCTGTTAAGCTGATCTCTTTGCTCATGGTCGTTATTTTCGTTCTGGCAT TGATTGGTCTGGCAATCTTCACTGCAAATAAAGAGGACCTGGCCTCTAGT GCTGATTACGGATGGGCTTATGGATTGGGATGGTTTGGCGCCCTAGCCGC CCTTATTGTTGGTGTATTAGTCTTTGTACTGTTTCGTTCGTCGTGATTTA ACGGTGATTCAAACTTAAAATCCAAAGAAATCTTGAACAATTATATACTG TAAGCTTCATGTTATCCCAGAATCGAAATTTTCGATCAAAATATCTAATA TTTATCATTCTAGGTATTTCTAACATTATAATTAGCACATATTTTATCCC CTGTTGATAAACTGTTTAACTTTGTTTCCGCGTTAAGTCCGCCCTAACGC TTTGGGCGTGGTGGCCGTTAAAATGGACAATGTTTTAGATGTTTGTAACA TCTGGGTGGCAATATCCGAAACCATATGAATCGATTTTATCTGTAGTATT TATAGAGCACTTTTCTAATATTTTCTTGTGTTAGTTATTTTTCAAGAAAT TCACTTTTAAATATTCTTGACCGTTCACAACACAAAATTTTTTATTTCTT TAACGCTCTCCATCCCGTGGGGTGTGTCGCCCCCTGCTAGAATCTTTTCA AGTTTTTGAACCATTCACCAAAACCTTCTAAAACCAAAGGCAAAAAAATA TTCTCAGCTTATATCATTTAGTTTTTAATATCTCTTTGACAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066537TCONS_00066537Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066537-proteinTCONS_00066537-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_456supercontigscaffold_456:164064..168805 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
52.71 52.61 26.44 19.69 0.22 0.14 0.16 0.15 0.27 0.47 0.48 0.19 0.02 0.07 0 0.14 313.32 409.86 0.1 0.11 521.68 531.96 82.42 84.01 54.7 57.14 74.06 7.7 6.41 8.3