XLOC_041575 (gene) - C. hemisphaerica

Overview
NameXLOC_041575
Unique NameXLOC_041575
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_455:333797..337930-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041575 ID=XLOC_041575|Name=XLOC_041575|organism=Clytia hemisphaerica|type=gene|length=4134bp|location=Sequence derived from alignment at scaffold_455:333797..337930- (Clytia hemisphaerica)
AGCTACGAAGCTCACCTGAAACTCCAAAACTTGATTTTTATTAACTGTTT
AGGTATACATTTTATGTTTTACTTTGTTGCTTTTCTTTTCCATTAATTTC
AGTATCTTCTCCAAGTAACAATGTAGCGAGAATGGGCCTTCGGACCTGAT
GTTACTTAAATATCGAACTAATCGAACGTGAACGTGATCGAAAACAGCTG
GATTCTCAAAAACATACCTGATCAACACAACCAAACCTTCTGTCTTGTGT
TTACTCTTTCCTTCCCAACAACTTTCGTTTTTGCTTAAGTAGGTTTTAAG
ATCCACAAGTAATGAACCTCTTATAGCTTTATTCAATAAATCTGTTTATA
AACCTTCTGTCAGGTTTCATTCCGTACGTTTTTTATCCACGGTTTCCCCG
ATTTCCCGATAATTAAAAATGACTGTTGATTGTGTTTGATATAGACCTTT
TTTTAAAGAGGCAGCCATGTTGAATAATTATGTACTCCAGCATAAAAACA
ATGATACAGCCATGCATAATTTTTAAAATATGCACGATANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACAGTAATTATGCATGGCTG
TATCATTGTTTTTATGCTGGAGTACATAATTATTCAATATGGCTGCCTCT
TTAAAAAAAGGTCTATTATTGCATTACGATTCTATGTATATGATTACTAT
TAAATTAAATTGGATCACTCTGTTATAGTTCATCTGTCAACCGTAGCTAG
TACCCCTGGGTGTTAGAGTTTTTAAGGGTGGGGGGCGTACAACGAAAGCG
AATATATTGAATACAATTGAATCAATCAAACCTAATTGAAAATAATCAAA
TACAATCGAACATAATCAAAATACCGTCAACTGCTCCAACTTGGGACGAT
TGTAGGCACCATGGGACTCATTGATATCTGGTCTGTATTTTCAATTTATA
CTGTAAGGCGGCAATCACAAATATCTTCATTTCGCGTCCTCGTTGGGTCT
AAAAACTGAGTCGGTCGGTCGGTCGTCCGTCGTAAAAATTTTCGGGTTCC
CATTTTTCCATCCATTTTTGGAGTGCATTCTTGGAGGAAACTGCCAGCCA
GCCAGCACCCAAAACAACCGCGTGTAATGGGTGGTTTAAAATTATGACCT
TTGACCTTTGACCTCCGACCCCAAAATGGCGCATGTAATGATTAACAAAG
TCAAAATGCTGCGAATGCGCTAGAAATCGCTTGCAAAAAATTCTGCAATA
ATATAATTTTTGAAGAAGGAAAGGTCATTGACAGAAAAAGTCCGAGTAAT
TTACCGACTTACCGACTCAATTCTACTCAATTTTCGAGAGTAGGTCGGGC
GACGCGAAACGAAGATATTTGTGATTACCGCCTAAAATCAAAAGAGAATT
GGTGTATTTTTTAATATGCGGTTCATTAAACTCAAATCTAATGACTTTTG
AGGTTCGGTGAAATGGTGGTGAAATGGCCATCCCATGTAGCCGTAGCCTG
CAGGTCCACATCAGTTTTTACTGCCAATATATATAGAATTGTATATAGCT
TGTATATACAGTTTTGTATATAGAACCTGACCTGTCAGTCTAAACTTAAA
CTCCTATATCAGGATTAGAAACTAGGCTAGTCATACCTCTTTTATCTTTT
CCTTTACAACAATACAATGCTGATAAGTTGACACAACACATGTGTACATG
TACATTGACAAGTAATCCCTGAGAGAAGTTTTTATAACATTATAGAAATC
TGCAACAAAAACGAAAGTGGTCTCTTCTGTTGATTGCTTCTCAGAGCTTC
TTTGCAGCTGTTTATCAATTTTCCACCAATGAGGTTGCCACATTTCAAAC
GGCCCTTCTTTTGGGCACCCGTGGCCTTTCAGTGCCTTGCACGACGAGCG
GCTGTAAAATCCGACCCTTCATATATAAATTGTTTCAATCCGTGATCCTT
AGGCTTAGGTTTCTTCAATTTACTGAAGAAAGCGGGAATTTGATGCGTGA
GTTAGATTGTCAACAGAGTGCCGTAAAAAATCATGGAATAAAAGAAGAAC
TTAAAATCTTAAATATTTTCATTCTGAAGAATAGGTGCAAAAAAGTGAAA
CATAGAAAAGTTTCATTTTTCATTGCATTATTCGAACAATGAGCTATGGA
GTACTTTCGTTTTCAAAACTTAGAAAACGTAAGTACTTTGTATCTCTTGA
TAATGAAATTTTCAGACCATGATTCTGACCTATTTCTTAATTAGCATAAA
ATTTCTGATCGCTTGGTATATAATAGGCAGGGTTTTAAGCTCAAAAATAT
TTTTCTTAGACATTTGAGGGTGACTTTGAATAGCTTTGAAAATTTGAGTT
CAATTTCAAAACACTTAAAAATGTTCAAAAAAGAGGATTGGGAAAAGAAA
TTTTCATTTTAAGGCTAAAAATTGAAGGATCGATACAGAAAAGGCGCAAA
AAGGAATTTCCGGATGCTTAAATGCTTGGGAATGGGTGAGTTCCGGTTCA
AGCGTATTAGACTTTTACTGAAATTCCTCTCAAAATTTAGATGTTCAGCT
ATCAGGTCTGGAAAGTCGGAGAGATTTAACATTAATTTGCTCCTTTTAGA
TCAAAAACCTGAAAAAGAAAACAAAAGTGACTGAAATGTAGAAAAGGGTA
TAACATTTAAATTCAAGATGCCATCAGCCATTCAAGAACCAAGCATTATT
GATGTTTGGAATTACAACATTGATGAAGAATTTGCCAAAATTAGAGATAC
ACTGGAAAAATTTCCTTATGTTGCTATGGTAAAAGTTTTACATGTTAACT
GTTTCTTTTTGCTGCAAGTGTGTATTTTCTATAATTAAGTTCATTTGTAT
CCCGTTTTTTTTTTACCTAAACCTTAAATGCTTTATTTCTTGTTCATATC
AGTACACAAAATGTCAAGTAATATAATTGAGTAGATTTTTAAAAGAATAT
ACTTTATGTTACTTCCTTATCATATCTTTCCTGTTATCTTTAGGATACTG
AATTCCCTGGAGTTGTTGCAAGACCTATTGGTGATTTCAAAAGCTCTTCA
GATTATCAATACCAATTATTAAGGTGTAATGTAGATTTACTGAAAATCAT
TCAAATCGGATTCACATTTTATAACGATAAAGGGGAACAACCAACAAACG
GATCCACCTGGCAGTTCAATTTCACTTTCAATCTTACGTAAGTACGCTCT
TATTCTGTTGAAGCTGGATTCACCATAGTCTGGAGATCCATACTCTCTAA
CCAAAACTTACACCATCCAAGCAAATATCCAATCAGAAACTACTCAGTGA
GAATATGGTATTTATGACCCAGTTTGAATTTGTTTACATTTGGTTTGAAC
TTGGTGCCAAAAAAAGCCGTTGATAAGGCTGCCAATCAGATTCACGCAGT
TCCAATCAAAACAATAATATCACGCACGTGACTTCAACCATTGTTCAACA
GCCAATAAAATTCTGCGCCAGGATCCTGTCTTAATTTAATACAGGGTTCA
GACAGACCCTGGAAAACCTGGAAATATGATAAATTTTCAGAAAAATCAGG
GAAACTCAGGGAAACCCAGGGAANCCAGGATCCTGTCTTAATTTAATACT
CGGCCTACTGCTGTCTTTTTACTCTGTTTTTTCGTGTCAAGTCCGGTACA
CACGTCAAAGTTTTTATATCTAGACAGTGTAGGCCAAGCCTCTCAGCTAA
ATTCACCATAGTGCTGATTGTAACATTTCAATCCAGAGAATATTTTTTCA
TGCCATAAAGAAAATATTGAAAGTGTGTGGATACCCCCTGGAAAATGGTA
AAATTTCCAAAAGTACCCTTGGAAAAGTTCTTTTCATACATTGAAGTGAG
GGTGGACGAACTAAAATCAGGCTTTTTATCCCCTGGAAATTTTAGAAACT
TTTACCCCTTTGGAAAGATGAAAAACACCGCTTGAAAATTTTTCTCGGAC
TACCCACTGGAAATGTTCGTCCATGGATGAGTTGCAATTGATGTAAGATT
TATGACAATTCAATGTTGAAAATAGTTTAACAAATTGTATGTTTTCAGGG
AAGATATGTATGCACAAGATTCAATTGATNATATGGTATTTATGACCCAG
TTTGAATTTGTTTACATTTGGTTTGAACTTGGTG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066458TCONS_00066458Clytia hemisphaericatranscript
TCONS_00066457TCONS_00066457Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066458-proteinTCONS_00066458-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_455supercontigscaffold_455:333797..337930 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
253.76	264.81	319.59	298.61	103.01	78.36	90.51	94.48	51.02	46.5	47.56	47.42	54.93	72.95	52.68	47.3	62.39	61.13	40.85	34.17	79.31	73.74	96.52	90.42	51.96	81.05	44.76	44.99	56.4	58.96