XLOC_041549 (gene) - C. hemisphaerica

Overview
NameXLOC_041549
Unique NameXLOC_041549
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_454:112345..116520-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041549 ID=XLOC_041549|Name=XLOC_041549|organism=Clytia hemisphaerica|type=gene|length=4176bp|location=Sequence derived from alignment at scaffold_454:112345..116520- (Clytia hemisphaerica)
TCTTAACAGTTCCACAGTTTCCCACATCGCTTCTAGAAAATTCAATCCGA AAATACCACTGGATTTTCTCTTCTGTGAAAATACCACTGGGCTTTCTTAG TAAATTTCTACCATTATCTCCAAAGTTTCACGGTTTGCACAGCCTTTCCG CGAAACCAACTTAAAAAATTCCACCAGTTTCTAGTTAACTGCTACCACAG ACTCTTCAAAATTCTCTGTTTGTTACACCTCGCCTCAAAAATTGTGTTGC CAAAATACCACTGAATTTGCTCAATGTTTAATTACCACGTTTCAAAGATT CACGGTTTGCAAACCCTCTCCTAGAAAACTCACNACCACGTTTCAAAGAT TCACGGTTTGCAAACCCTCTCCTAAAAAAACCCAATTCGAAAATATCACC ATTTTCCAAACTCTCATGGGCTGCCACACCTCTCATAAAAAAATTCACTT CAAAAACACCACCAGTGTTCTCAGTATTTTACCAACCCTCCACAGTCTCA GTTTCTTCAAGGAATTTAGCCATACCACCAGTTTTTCCTAGTAGATTTAT GATCATCTCTCTTCAGTACCACGGTTTGCTAATTTCCTCTCAAAGTATCA GCAATAAGATACCAACTCTCTTCTCAATATTTTAAGGTTACACTAGAATC TCAGGTTTCATGGCTCACATTTCCGATCCAAGATTCTAACGAATTATTAC CAAATATCTAAAAATTTCCACATTTCACCTCTCTCAGTATTTCTTTATAA ATCAGTCTCAAAATATACATCAAAATAAATAATAATTCACTGCAAATTGA TCATCAGTCTAGTCAACTTCACCACACCAATTTCAAAAAACCACTGTAAC AACTCTCCTCCAAAGGTTCAGTCTCCGAATACCACTGATACCGGTACCAC CATTTTCTCTTTCTCTTTCTCCCACTTTTTCACAGTTTGCCACACCTCTC CTCGAGAGATTCATTCCAGTTACCGCCAATTATCTCAACGAGTTATAACC ACTTCGATACACGTCTCCTCCAAAAAGTTCAGTCCCAATAAACCACTGCA AATCTCAGTGAATTTCAAATATTTCAACAGCTTCCGTTTTGTTCACCTCT CCCGGAGAGATTCCAAATTTCCACCAGTCTTTTCAATGAGTTATTACCAC TCCGTCACACCTCTCCTCCAAAAATTTCAATCTCAATAAATTTCAGTCCT CAATAAATCACTGCAAATCTCAGTGAATTTCACATCTTCTAACAGGTCAA GGTTTGTCACATCTTTCTTTTCACATCCTAAATTACCATCGATTTGATCA CCACACCTCTCCACATCTTTCAACAGTTTCACACTTTGCAACACCTCTCC TCAAAAGTTCATTTTCAAAATTAATTCAAAATTTCTTAACGTGCTATTAC CACACTCATTCCTAAATTTTAACGTCCTCAGAATAGATTCCAACGCTTAT CAAGCAAGAAATGGTGAAAAGCAGCCATCATGGCTCAACCGTCGATTCAG CCAAGAGTATAATGCCTTCCAAGACATGGTCAACTGGCTAGGAAAGATGA GAAGGAGCTAAGGACGGATGTTTCGTTGATTACACATCACATCCCTCTGT CAGCATGACGGAATTGCCCGACGATGAAACTTTTCTGAAAAACCATTAAA TGATCCAGCATGGGTAAGTCTCTTGAATTACAACCACTACAACTTGATTA GGCTCTAAACCGAAAGTGTTTACTGATGTTTGCTTTATTGATTTTCGTTC CTTATTGTATACAAAAGGCCTTATTGAACCAAGGGAACATTTTTCAAGAA TAGCCCTGCATTGCCAAAATGAAATTTTGCAGGTCATTTTACAATATCTT ATCTATATCTATATTTTGTTTTGTTGCTGATATCCGGATAAATACATGAA TACATGCAAGGACTTGAAATTCTGGCTTGTCATGAAAAAACAATTCTTAA AACCCATTCCCACTGGAAAATTTGGCAAAAATTTGTTTCCTGATGCGAAA ATACCCTGGAATTTTAGCTCCACTTTAATCTAAAGATTACACTCCTAAGT TTTTTTAACTTTGGAACAACGAAATTTCTATCCCCATTGGGATTTCAATG GGGATTTTTATCTCGACTGAAGAAAAAAGTTCCACCGGGGCTGCGAGACA GGGGTGTTCTTAATTAATGGCTTCTTTTTTTGATAGCTTTTTCAGGCGAC GCCCTAGAAGTGAGGCCATTGTGGTGGCAATACAAGAAACACGTCTAAAT AGACACCCAATACCAAAAACTTCGGATTCGAACAATTGAAATTAACCTGA TCAATCTGGTGCGACTTTCACATTCCAACAAAATTAGAAGTAGGTAAATG ACGTGGCTAGTTCTGGGAATAATATATTTAGATGTTAAAAATATCATCTG GACTTCCTCTGGACTAATAGAATCTCTTTGTGGCAAAAACACTCTCCTTG TCACTCATTAAACGCTGGTGACCCCCTGAAAAGGCACGACAAGGAAACAT AGTTTTAAATTCTGCTTCACTTTTTTCGGGACACAATGCTTTGATATTTT AATTTTTGAATTATATTATTTAAGATTATCACTCGGCATCTAGAATTTAA CCATACGCCAAATGAACTGTTCAACCTTGAGGCTTTTTACGGAATCTCAT GAATTTATTTTCTTCTAGGAATCTGTCCAATCAAGGAACTTGGTTCAATC AGGCTATCACAACACCACACCAATGGATATTTTATGAATGTCTTCATGTG TGATCTCGTTTTGTCCCAGAAAAGTCACATATCGAAATTTGCAATGTATG ATGACCAACCAGTTCGAAGTAATGTGTGACATCTGCATTTGGTACAGAGG TAAGGTGATATTTTACAATATATCTGATATAGAAATTGATCACTCCATTT TATTTAAGGGTGTACTTCAAGATGAATTTTTAGGGGTATAAGAAAGTTTA ACTATTTTTCCAGAGAGTTTGGTTTGGGTCGTTCTTTCTCAAAAGGGGTT CGTTCTGCGATCAAGCATCGCCTATGTTTTCCCGAGAGTTCTAAAGGAAA ATATTTTGAATATCTATTGGGTTAAAAGTTATTTTGAAATTTCCAAAGAG TTAATACTAATTTTGGTCCATCAATCCCACTTTTTGTTTATTTTTGCAAA TTATGCCATTTACCAGGGGCTACCCGCACAATTTCAATAAATATTTTGGC TTGAAAAGATCTGTCAAGAGAAACAGACCTTTCAAGCCAAAAGAGTCTTT CAGGCCAAAAGATTTAGTGAAATTGTGTGTTTACCCCTTGCATGAACATT AAATTCAAGACAAAGAGGCGCCTTTTCAATCTACAAAAGTACAATGCAAA TTATATTAGTAGTATGACTTGATTTCCCCAGTGGAAAAATACCCTGGAAT TTCAAACACACTGGGAAATTTAGTTTGATTTTATCCCATTCGAAATTCAA TGTTTAAAAATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNTATCCCCATCGGAATTTCAATAGAAGTTTTTATCCCCGCACCGAGGA AAAAAGTTCCACCGGGGCTGTGAGACAGGGGTGTAAAGTTCCTTTAACAT CATGTTAGGTTTTTAAAAGGGATCATTATTATATCAGCAGTAAAAAATAG TCTTTTTGACTGCGACAGATAGTTGATCTATTCAAGGAATTCTTGATGAA GCTTAGAAGTTCAATCAAAAGGTCCAATATTCAGAAAGAGCCTCATTCTC AATTATCAATTATCTATATAGTGATTAAGAATTTCTTGTTTTATTGTTGA ATTATTGTTTTGTTTTCAGGAAAGCACCTAACTTCGAACTTCAAAGATTG CCATCAGTTCGCGTAGAATTTCCAATGGATTTTGTACAACATAATCGAAT GCTGGTATTTCTTATTCAAGAATGAAGTTAACTACTACAAAGCAGAGTAC AGATTGTTAAATTCACAAAAATATTTTTTCTTTATAATGAATATATAACT TGATCATCAGAACAAAAGTTTTCTCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066381TCONS_00066381Clytia hemisphaericatranscript
TCONS_00066380TCONS_00066380Clytia hemisphaericatranscript
TCONS_00066379TCONS_00066379Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_454supercontigscaffold_454:112345..116520 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.53 2.34 0.48 0.14 1.18 1.12 2.27 2.99 2.22 2.5 2.67 1.7 1.5 1.78 1.49 1.41 2.15 3.48 1.12 0.96 2.59 2.44 1.87 2.09 2.95 3.76 13.3 10.66 1.78 1.93