XLOC_041404 (gene) - C. hemisphaerica

Overview
NameXLOC_041404
Unique NameXLOC_041404
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_451:336162..340865+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041404 ID=XLOC_041404|Name=XLOC_041404|organism=Clytia hemisphaerica|type=gene|length=4704bp|location=Sequence derived from alignment at scaffold_451:336162..340865+ (Clytia hemisphaerica)
GTTTTAGTCCATATAGAAAATCAAGGAATTACAGATAAAAAAGAGACTGG AATTCTATTGAAACCACTGAAATCCAACAAGTTGAATTGGTCCAAAACCG AGTCTGGAAATTCAATCAATTTCTAGATCTGTGTCACAGATATGTACACA GTGATCATGCTGACAGAGAAATGGTTGTTTGGATTCCTTCTGGTTCATAT TTTGTGTTGTTCTTCCGTGTCATCGAATATTTGCTCTCAATTCCAACTGG ATTGCCCTTCAAAGAGATCTGATAAAAGTGTAAGTAAAGGGATGTTTAAA GAGATTTATTAAGGAGAATAACGTGCACCTCCCCCGTACTTTATCAAGGA GAATAATCCAATGATTCACacccaaaagttttccacattttgaaCGTGCA AGAAAacaaatctccaagttcaagacaAATTTTAACTGAATATGTGAGGT GGTTTCCGATTGTTTTCATCCATATTCAACGCGATAACCATTTTCAGAAG TTCTTCAGATCCGCCGTTGTGGTTTTTATCACCAGGAAATTTTACCACGT ATGTCTACTATATATATTATCTCCCCAGTCTCCCTGGATCCGCCGGGCCA ACAAATGAGAGAGCTCAAGTATAGGGGAGATTTACATGGTGGGGAGATTT CAGCCTCGCCCCTTTTGAGCAaattctcaaattcctagcaaatTGTGTCT CATTTTGAGCATTCAGCCTCTTTACTTTAACTGTTGTTTCGCCGGGCCTG GTTTGAAGTTGAAATTTAATTTCCAGTAAAAAGTCGTCTAGTCCCGTTGA TGAGATTCATGCACACCTTTAAGCCCGGAAACCATGTGATGAAAACCCGC TTGCTGATTTCGATCTTTCCAATTGTTATGATGACGATGGCTTCACGACA GGTTTATTCATAGCCATTATAAAAagactggtctggaaggcttttgtctg tTTCTGTTGTTAAAAGATAGGGCttgtaccaaaatcgatttattttgcaa actttttgatcatgtgattagaaattagaccaatcccaagaggagatttt ggtaacgtgataaaaaagtatgcaaatcgcaactttttgtttctaacaaa aaaaaaattgaacaaaaagctaaaatagCACATTGCCAGACCAGGGTTTA TTTGAAGGCATGTGCaggttgaaaattaattttccatTTGATAAAGTAAA ATATGCTCCCCTTCcttagtaagtaagtctgcgaccgcagtcggaggcga cccgaaggctcctctttcgatagctatctatccgaaggtaggggagggcg ccactctttctccctggatttctccacttaccctaaatccttctcttagt tgctgagcatcaagcagagagacatcaagtaccattttgggaatctttgg tatgacccggctgggggttgaacccacaaccttgcgaaccgtagccggat gctctaccactgtactacggtcgctctCTCTACGCTCCCCTTCCTTAAGA ACTTTCATTATCATTTATATATAGTAGACACACGTGGTGAAATTTCCGGG TGATAAAAACCgtaaaataatgaatataagtGAAATTTTATATCAATCCC CCCCCTATCGCTTCAGAATGGGCCCGATAATGGGTAATCCAGAATTTGTT TGGTATCCAGCACACCCCTATCTCGCAGTCCcagtgaaactttttttttc agtggggataaaaattcctattgaaatcttaatgggaatagaaattctat tgtttaaatgttAAAAACTCCAGTGGAGATGATTTGGGAGTGCAAATTTT AGACTTTgattttcgagtggggatgaaataaaagtcaatttcccagtgag gCTGAAactccagggtattttcccactgggaaccaaatttttgtcgaatt ttcagtagggctggggtcccagtgggtcagTGACACAGAGGTGTTTCAGC TTAGAATCTTAATGAGGGAAATTCTTTACACAAAGTTTGATCTTGAGATT AATTAATGTGTTTATTTTTAGATTGGTTTTCGGTTAATCAGCATTCATGG CGaaaattccaacaaacaacaagtAGACGTcaaagatgacgtcattgaaa gaTTAATGGCGGATGGTTCACTTGCCCCAGGTTCCTTCCTACCAACACGA GCCAAAAAGGAGCAAGAAAAATTTAGAGGCGTTCCAAGATCAACAAAAAC TTATGGAGATTTAAGGCGCAAGTTGTTTCAAATTCGAAACTTTGCTTTCC TGAAAAATGAGCAAGACTCCCTATTCAATGATCGAGAAGATCTAGATCTG CCATATGGAGATGTCAGTCCTTTAATGGAGAATCTTCCTTTCGCTAAATT TGAGCATTTAGATACTCCACATGATGCAAAAGAGCCTGTCATAttgaaaa atgaatatatcaaCTTGGCTGCAGAACAAAGCCAAGAAGCAGCTCCTGGA AAGAAAATCGATTTCCCCAAGCTCGAGAAATTGGTCTTGCTAAAGAATCT TGTCAAGAATATTGAAAGTTCAGCTTCAGATAACGGAAATTCATTGGCGC CCGATGACATGACGAGTCCTTTTtccaagtttgaaaaatcgttCTTGCCG AAAAGAATCAGCAGGGGAAAGGCTGAAAACTTTGATTCAGGTGAGATCGG GAACTCGATGGTGCCCAAAAAGATGAACAGCCCACAGCACAAGTCTCAGG AATTCCTAAAATCGGCCAAGACCAAGAGAGAAGCTGATATTTCAGTTCTG GATGATGTGAATTCCATGCCAACTACCAATTTATATGAAAAAGACACAGT TAATACAGTAGGCTACTGGCAAATATTGAAACAAGGAGTCAGGAAAGATT CAGATGGTTTGAATGGCTTAAAAGACACTGAAAATAAAATGCATGGGGAT CTAATTAAGCAACAAGATCTTATTTTCTTAGTTGCCAATGAGGAAACTAA AAATAGAGGATttcaattttaatgtttttgttttgctggatttgtttttt ttttttgcatttggtTCCATTCATTAATTGTCACTGACTGTCActgaccc actggaaaatctggcaaaaaAATTCGTCTCctgtgggaaaataccctggt atttcagccccactgggaaattgactttgacttCATCCccctcgaaattc aatgtttaaaaattacactccacaaccatccccattggattttttaacct tggaacaatagaatctcTATCCCCATCGGGATTTTAATACGAATTTTTAT CATCATTGAGgagaaaagttccaccggggctgtgagatgTCCAAATGAAA GATTCAGATTCCGAAACAAATGAATCTTCATCGTAAACGGAGAATAAGTG TTTCAAAAGACATTATGAATAGATGGTTCTTCCTTTTGTCATATTCTTGA TACGAAAATCAGCGTCATCAATCTCCTAAAATTTGAGCAGCTTTATATct ttaaatgttttattttttttaactgtttCATTATATACAATGTCACTTAC AAAACTaatggtaattatttttacctatttacaatgaaagaaattaaaga aagcTTATGGAAGTTGATAATAACTCTGTTTGGGTCCCCCgggcccgggg gtactagggttgcgagctgactttcgacccttggacttactgggactaaa aaggagaaagcaaaggaaaattttgtgaattttacgacccttaccaggac aaatttgaccaattttgaccaaatttcgaattttcctatttctcctaccc ttagtggggctgaaatttgattttctgatttttctgacccttagcgggac tttggaaatctaaaaaaggtacccttaagggcggtacATACCGTTCCCTC CATTTGCCTAAGTACCCCCCCCTTCGGGTTTGGGTACACTTCTGTTTTCA ACAATCCCAGCTggcacacaacgttattttaacgttcatctaacgttata tggacgttgtgaacgttagataaacgttgaaacaacgttgtgtgccagtt ggggTGATCAGCGAAAAGATAATGAACTTctcatccaaaatctttgaagt ctTCAGACGGTCTTAgctttttgggtttcaagcctaaaaatgttcttaac atatgttcttcttttcagcattttttgagtatttttgtccattttcctaa gaaaacaggtgttttagagccaacaaagccttaaatgttcttaacatgtt cttgagattttggccaccgaagtctttttcttatatagtttgttcttata aaaaaaaatgttttggctTAATCAAGTTAACTTAGTTTGATAAGATAAAA TCAATACAATATATCAGTTTTTCCGACTTGCTTGCTTTTGTTTAGTGTTT AGAATTAAAGGACAATACcccttttgcaaaaaaaaactaaatcttGTCAA NACTTGCTTTTGTTTAGTTAAGGGACAATACcccttttgcaaaaaaaact aaaTCTTGACGTAACACTGGTTCAAGACATTTCAATCTAAGTCAGAAATA TGAGGGCCCAGTCATCCATCATAACATCATTGTTATTGATTGTTGTATGG AAGTTTCCCAAGTGTTACCAAAATGTTACGTTTTGTTAAATCCGACATTT TGTAAGAAAAACGTTTAAATGCTAAAGATACgatataggccatttcacag ttgaaatggatcatgggtaatcaggactaattgcgcctccataacggctt cccg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00066133TCONS_00066133Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00066133-proteinTCONS_00066133-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_451supercontigscaffold_451:336162..340865 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.7 0.78 0.15 0.24 0.23 0.16 0.58 0.37 1.59 1.85 0.99 1.51 0.19 0.17 0.38 0.37 0.41 0.57 0.47 0.81 0.55 0.59 0.59 0.89 0.63 0.6 1.17 0.92 0.36 0.17