XLOC_041157 (gene) - C. hemisphaerica

Overview
NameXLOC_041157
Unique NameXLOC_041157
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_443:36275..46151+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041157 ID=XLOC_041157|Name=XLOC_041157|organism=Clytia hemisphaerica|type=gene|length=9877bp|location=Sequence derived from alignment at scaffold_443:36275..46151+ (Clytia hemisphaerica)
aaaaaactgattttgagtGTAAAGACAGTccttaaatttttcaattattc tTTGTCATAGATTATTGTCTATCGAGAGTAGCAAAGCCTTAGCAATCAAA ATTTGTGCTAACATGTACTGTAAGTAATTCCTTTTTTATTTATAGTCAAA TCACATTTCTTGAAGATATTAGAACTCAAACATGTTCAGTAACCAACAAT TTAAAAAACCAAATATGGATGTTACTGCAATGTTTGTTCGTTTATTATGA TTTTCATGGAAAAAAGAAGAATCATAATGTTGTCATCAAGCTCTTTATTT CTTTTGCTTATATGTTGGTGGTGCTGGGAAGCCATAGGGTAAGTCAGAAt atataaaaagattttttcattaaGGATTTATTTACTACCATGTACCAATA AATGAATTTTTGTTAGTAGGTCAGAGTTTGATTCAatcgttaaaggtttt gtttttaaataaaaatgatatcgtttgcttactcatcaattttattcaca agctttttcacattggattgacacagatgtggagcaagattggtcagaaa gagaaaaagaaaagcaTAGTATACCAATAGAAAGACACTGCCCTGATATA AAattatgtgtctgatatgaaacaggaacactttAGTAGGggaaaatttg ttcatttttttgaggtcgctcaattcttttagtcaaagcacttactatac atttttggaaagctaaggggtaggggaatcaaaatatttttcggaTAAGT ATGACGCTCCCAGGCAAAATCATaccatagggtcaaaaattgatgaaaat ttgagcttgagaaaacggagacctgctgtatatttttggaaagctcattA TATCAATGATATCAATAAATAAACTTTTGAAAACGAAACTAACCCTTTTC CTTTGAGATTGAAAGTCACGATTGAGCATTCTAATATTTTAtctcaacaa aaaaaaacataggtAAAAAGAAGTTGAGAATTAAAGTCACATCAAAAAAC AGAACAAGTAAAATAGTTAAGGTTGAATTTATCAAACTGTAGAGCTTGAG AAAAAGAACGAATTTAAGTGTCAGAGGAAATAACATCTGAAATTCAGAAC TTTTCATTATCAAACTGTCAAGTTTGATGGAAAGAAGGACCTTAACAGCG TCAGAGAAAATAACATCTCCAACTCATTCATTTTCTTGTTTTAGATCAAG TTCATTTTACAAGAATGATGAGCCAATGATATTCCCGTTGGGTTCAGACT TTGTTGATTTTCGTAATGGCTCAATGGATAGTTTGAGTGCTTGGTTGAGG TTGCATCCAATCACACTTGTTGTTTACTATGCGTCGTGGTCTGGACAATG TCTAAAAGCAGTACCTGAAATCATCAAAACTCATAATGTGATCAGAAATA ACCCTGGTGTAAGTAAATAGATGATATTTATTGGATCAGATTGGATCTGG CCTGGGGCTAGGCAAATTGTTCTAGAGATAACTCAATAGTCATTTGGGAG AACGCAATGGGGTGAATTACAGAAAAATCATGCAATGTCCCGTCTGCAAC AGGCACTTTTTGAGGGTAAACTTTATGCGTAAGCTTGCTATTAGACAGAT ATCTTTGTTAATTTGAACTGGAATGGGATAAGTTTATTTccatcgaatta tagagagattcAATTATAGAGAGAATTTTATGAGAGTCTCCCATTGACGG gaactgagaattagttcgaaaGATTTGTATATTAGAAGTTCGGTTTAGCA AGAGTCCATTGTAATACTGTAATTATGAATTTAAGAAGTTGTATTGGATT GAAAACCATTTTTGGTCCCTTTTTTTAGTCACAATATTTAAAAAGGATTC ATACGTCACTAGAAAATAGATAGTTATTTCATACACAAATAATaaatttc atattatttttaGTTGTCTGTAGTTGGTATCAATTGTTGGCACAGTGAAT GTCAGAAGAACTTCAATACTCCTCATTTTCCACGAGTATTCTTATATCAT ACGCATCATCGACCGATTGAGTACTTTGACGAAGTTTTAACCAACAAAAT GGTAGGCTTTGCTTTAGTCCAAAGTTAAAGAAATTGgattaaagtaaaat taaattgGGATTTCTCCCTTCAAAGATTGATTTCATTCTCTTACAGGTTT ATTCAGTAACTAAAAATTCAATGATATGCAAAAATATGTGGTGGTAGTGT GAGTATATTCTTTTGACTTGTATTGTTTAAGGAAAGATTATTTATCGCGA ATGtctttatcttttattttaggTGGAATTCTTGATAAATTCAATTCGAC CTTTCACACACATAGGAAGTGCAAATGCTCTCAAAAGATTCCAACAAGAA AATGATGTAAgaatataataataatttcgTAGTTTCTACCGGTCATTGCA GAGCTAACTTTTTCACTTTGTCCGATTACGATTTGAAGGCTATATAAGGC TTATAGTCTTCTCATGTTAATTTCAACCTAATGACTATATTATACTATAT ATACTGCTTCGAAACAAAAGAGGAACAGATTTAAATTAGAataggtgttt agccaatctaaagGTCATTTCAGACTTCATAATTTTCTAAGGGAGCTACG CCACCTAGAACCCCTGTTCATCTGCTCAAATTATTTACGCAAAATTATAT ACCGGGCAAACAAATTTCCTTATTACTGTGATTGTTGTAAAGCATGTTGT ATTTGGAGGGGCTCTTGAAATGATCAATTGTTAGTATAAAGGTTTTTCAG GTTTGATTAAATCATATGGTTTTCTAATCATGAAAGAAAACATTCaattt tgaagaatgttttcaaatattttctttcataaTGACGGGCTTGATACTTA GTAGCATAACCTCGCCTCAAAGACTTCTATTGATCAAAGTAAAACAGTAT CTGGTCATTGAGTCTGTGGTGTATTGGTGGTTTTCCTCACTCACAATTAA ATTCCTattgatcaaagatttttgggAAGGAATTTTAAGTAACCATCTTG TTCTTTATTCATTTCTTGTTAGAATCACGTTTTATCTTTCATGAGTCCAA CAGAAATCCCATTGTCGCGGAAATATAAAGTCATGTTAAAAGTGGCCCTA CAGAGTCTTACATATGGTTTGTAATTTTTAGTTTACTTCCATTTACTATC GTATCTGCTTTATTTAGTTTTCAGGTTTCTTCTGTTATTCTGTGTTGTAA ATCAATCATGTTTTCTTCAAAGACGCCCCCTTTGGAAACAGTAGTCTATC AATGATCCTCCTACACTATATAAGAACTAAGACTTCAATGGCAAAtatat taagaacatccgaaggattcaatatttttggatgttcttataaaaagacg ggTATCATGTTTGAAGAAAAGCCCCCTTTACATTTTCACAAGTAGTAGAG GGAAATCCGTCCGGTTGGGATTTCTAACATGGATTTCCATCCAAATAAGA AGCCTTTAGAGCAGAATTTTCGTGAAATTGAAGTcaaattttagactttt tttgcAGATAAACCAAAGGTGATCGCAACACTGTTctttatttcctttgt tcttttgattTCAGCAAATACACCAAAAATCGGTATTATAACAAACAAAG ACATAGCATCGACTCATGGACTCCTGAAACATGGTTCTGTGTCTCTCAAT TCAAGATTTAACGAGAAAAAGGTATCAGAATGTTATgtttagttttaaaa aaaagcCTATGTATGATATTcacgacgtaatgttttctacggaaagaccc cggtttttgccagtacagtagtggcaaattttatacagcttttgtctagt ttaaatttgccactactggcaaaccggggtatttccgttgaaaacattac gtcatgaatatcatgaattcgaGATCAAATCGTGTTTGATTGAGCTTATC CagaagaaattatatttttgtattgTTTATTGTGTGTGTATATATTTGTA TTGTGTTGAGTTTGTGTATTTTGAGGCGTTAAACACCTTTGTATATCTTT TAATCTCACATTAAAAATCTGAAGAGTTCATTAATTCTACCCCCTAAACT TTATACATAATTTATCATGCTTCATCTCTAGTGATGGTTTGTCTTCTAAA TCATTTATTAGTTTAGTCATTTTCTGTGTTTTAGGTATACCCGGCCAATT TTAATTACACGTCGCAAGATATTATCAATTGGATTAGTGCAAATTCTAGA AAGGTACCTGTCATGTcatgttttattgttttatatGCGTGAtgatacac ctttcccgtaattcaaacttttcagaaatggcccgggtaAATGTGCGTTG TGTActaaattgtttgggaggtaaacgaacgcgtttttgcctgctGCGAG AGGTTAGGAAAAGTGAGTTTtgtttggcaaaaaaatttccgggtggtata atatcatgaatagaaagaacatactaaaatttgagaggattttgattgac agagcacaaaaagcacaaaaaatccaactttccctaaggaaacgcaggca aaaacgggtttatTTATCTCCAAACGTCCAAACGGTGGACAACATCAAAA TAATGTGCGCGCATCTGTTTttcgaattacgggaaaggtgtattcacCCC TTTAAACTTAATTACATGGTTATTGAATAAGTATTGCAATTTTTGCAGAT AGCCCTGTCTCATGGACCAGAGGAATATGAGATGGAAAAGCAGCTTTTCt aattactcaaagttcaacgatcacttctatagaatattctattgtaaaaa cgttgattaggtcattaagtgaaagtccagaaaagacggctcgccataca aatcggacggtttctacatgatttgacgataaaaatgaaaatttgttttt ccttttttgccgattactagtccaatttttaagaataaggagcaatattc ttaccaatgtatagcaaaagaaatgcttaacgcaatgatattaaattggt tctggtaaaactgtcagaagtcgagtaaaatcaagatgaagttataattt tctcgagctctagctttccatattatggtgcggtcatgatgNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNT TTGTCACAACAcactaattatgcagattttttatagcgacaacaaaagaa acctatttactcgacataaactcccttaagggcaagagacctggtatagg acgagccgtttttctattgttttcaagaagctgtttttccatctctttac attcctctgcatGGACCCAGTGAGAATTTTGAACAACAGCAAGTGACTTC GTTTGTTTGATACAATAGTAGAGACTTTGGAATTAAAAAATCCAACTCTA ATTCCTTcttaagaccatgttcgcacgtgactgttccgtttcgctctcAA ATGGAacgaagccattctattggttacattcaaatgttacgtcacttcta accaatagaatggcttcgtTTCTTTTCGGAGTGAAATGGAatcgtcacgt gcgaacatgatCTAACTCGAATACGCCTCGTAACTCAAATGAGGCTAACA ATTATAATAAACAGCCTTTCTTCAGTGGCCTTGCAGACAAATCTTAgttt tacaaaatttgaaaaaaccctTTCCATACATCTTATAAAAAGGGAAACTa tattgaaaaatcaatttccatTGAAGTGCCCCTTTAAACTAAAACTTTAA GCGTTCCCTGTGAGAGCTCGTTTACCACCGTTTTAaagttaatttcttta tttcattATCAGCTTGTTAATCAATTGACACCACACATTTACGAGAGGGA GTATTATACCAAGCAATTGAAACAACCAGCTTTGATACTTACTTCTCCTA CACCTCTCTCGAATCTTGATAATGGAGAGAAATTGGCATACTACCCTATG GTAAGGATGAATTACAACAAACAGATCAATTTCCAAATGCGGTTCGAAAA CGTCAATACTAGCTGTATCAGAAATATTGATGAAACTTCGCCGTCCTATT TAAATCCTAAAATCAATGTTACTGTAAGAACGCTAGATGTACTTTATCTA TACAAGTATCTTTATAtcctcccagctggcacataacgttgtttcaacgt tcttctaacgttatatggacgttgtgaacattagatgaacgtcgaaacaa cgttgtgccaACTGGGCTGTGAAGTCAGCGTCTGTAACTTTTTGACGCTT TCTGCAGTGATACAAAGTGTCACtgaccaataaaaaaaattctttgagtg gataaattttcgcgtggccTTTTTGTTCGCAAATCGAAGATCTAAGATTT TTGCGTACACAAAATCATTTCCTTTACTTTGCTTGGGGTTGTGGCGAAAA TACTGAATTTTTCGCGAAGACtaaatttccgaaaaattgcccaaaattgg caaaaattaatccagTCGAAATTTAATTCACTTGGTTTGTCTTCAAGTTG CTGGCCAAAATAAGTTGAGAGTCATTCAGTTATAGTTCCGAcatctttaa tttttctttcagcttTATGAAACTGCTACAAGGTACTACAACTGTTCGTC ATGCTATCAAGAAAAACGCGAAATCATAAAACGTTCAAAGATGCTACGAG AGAGCGTACTATGTCGAGATTATATCATTCtaaaagactttttgtattta tcaGAGCATATCTGCTTTAATAAACAATCTATGATTTGTGGGTCTCAAAA TTTATATACGGTCATTGACCCTTACCTGCAAGTAACATACATTCGCTACA GCACACAAAGCGGCCACTTGTCAAGAAGAGTCTATCGTGATGATTACCAG TGGTGTCGTTATAGAGTTGTCAGCGTTTCGTTCTTAAAGAAATACGGCTT AGCTGCAGGTTTTGTAGAAAACGAAGCCCTAAAACTTAACAGATTACCAA AAATGATTACGTTAAAAGATATATTACATGACCTAAATGTTACAGAACCT ATAgttaatattttatcaaaagacTCTACAGACACATTCCGATGTGGCTC TAATGCGCCTTGTTGTCACAAGGGCCAATCTAAAATGCCGCATGGTTCGA TCGACGGATTAGCATGCCGCACAAATAAGACattgaatttttacattttg gatGCATTTCGTTATGAATATTTAGTGACGAAGGTATTGGGTGTTGAGCA TAAAACGAACGAGAGTTCAATATTTATTGTTGATTTACAAAGTAAAACGC ATCACCTGATGGGAAGAGAAAAAGCTCCTTCTGCTTTAGGTAAGATTTAC ACTAACTGGACTCTGAACAATGTTCAACTCTCTAGGgaacattttttctt cttcactttcgtGGTAAGAACcttataaaacattttcataaaattttgtt actaacacttgcctcgttttgaaattattgccattgtGATTAATTCCCAG Cggtttttattaaaactactttctaattcattaaaaaaatcattcaaggg acataataaccatggtaattgtttgaatacggggtaagtgatgttcgtga cgtaatttatgaaaaagtataTTCATGCCAGAATAACAAAATTCTTGCGG CCTTTTTGATCTTCTGTTATTCAAATGTCATCAGACCTAGTATATAGGAG ACAATATAAAGCGcctcgaaattttaagattaagTATTTACGATTTTCAT CTGCAGAACGATTGATATTGGACTACACCAATGATAACTTGAATCCTCAT TACCCATCCATACCTTCACAACAACACAGGCAACCTTTACATAAAGAAAT CGTTGAATTATCCAGCTCTTCATTCAATAAAGAAGTTCTTGAAAATGACC AGGTATAATAATATAATGGTATGATATGGAAAGATGATATAGATTACTTT GTATATATTACATCTTATGTTGCCCTAAAAACTTCAGCATGCATTCTCCC AAAAAAGTTTCGAAAACGATGTGCTTTGGCAACCATCTTAGCATGCTTCG AACCTTTATCTACACACTGATCTATTCCATTTAGCGTCATACTTCAACTT AACTGATATTTAGTCGAAAAATTACGGTGTTTTATACATATTCCTACCGA GGCCAGGGCCCTGATTTTATGAGTAAACTCTTTCGCGCGTGGCTCGCGGG CGTCAGAGAGTGCTTTAGTACCACACCCgaccattttctttttctttgta tagttgtttgtttgaatgttttgtctgttttgtatcatatttgttgTTAT TGTCGGTCGATTAATTCGGGTGTGATGGTATTTCagcttttgctgagatt atgttgagggtagtgttttgatccatgagagattttcaaacttttcttag atataataaagagttgacacaatatctacagattttgtttcaaactcaga gtttcatggtgctAAGGCACCAAAAATGATTAAACTGAATCATGATTAAA TATGAGTGAActctctttttcttcttctacaGAACGTGTTAGTGATGTTT TACGCAAATTGGTGTGGTGTTTGCAAACCAGCAAACCTCATGTTCTTGAA ACTCCTGCACCAACAGAAAGATTCAAAAGTCAAGTTTGCCAGGTAGCTAG AACATCTTCAACGTAAAGACTTGTGAATacctttctttattttttctttt atgtttttccAAGTCTTCATTTTGTACTCTGCCGCTGatttatttaatgt tttcaGTAATGATTAAtagtttgtattttttatgCCGAAGCCTGGATATG TCTGTCACTAACTGTAGAGAGCCAAATGGTTATATGGTGCTTAAAAGATA TTTCGATTTCTTATCTATATTCACAGTAGACTcgtcgcttattcgaactt ctattattcgaatctttctataattcgaacttattcccaGCCCCCNTCAC AGTAGACTcgtcgcttattcgaacttctattattcgaatctttctataat ttgaacttaTTCCCAGCCCCGGTCAAGGAGAatcctcttaatatactttc tataattctcatctctctgtaactcgaagaaaTAAAATTGCCCGTtctag ttcgaattagcgagaatcagctgtaaattatttcttatatttcttcTAGA AAATCCTTTGTCTTTCAGCAAGGATTTCTGActtcagatttttaaaagtg tttaAAAGCAATCCGAATGTAGAAGCACATAACTCAGCATCAGCGATTCT AATCTCCTCTTGTCTTGCATTTAAATTTAGGATtctataattatttttct tttccacacCACAGGATTGACAATGACTTGCATGACTTACCATGGCATCT AACGGCTTCTACATATCCATCGTTCATCTTGTTCCCTGCTCAAAGGTAAA AACACAAAATCTTGAACACCACTGGTCCCTCGAAGTGAATGTTTTTGTAT CGTAGTTTtctaataaaattaaatttaaaggtacttttcattttcaaaga ggATTTTCGAGAGCTTTGATGAAAGTTGTACTTCACGTTTTTACAAAAAC GCGAAAAATGTAAACTTTCCTCTCTGACAGGTAAAGCATATTGTTCACTT TGTCACACTGGTTAGTCACAGGTTGACTTAATGAGGACATATTTTACCTT TTATTTTCCAGGAAAGAAGATTCGATAGCATTTCCTACGGACAAAGAAAT GACGATGgaaaattttgcacaatttttaTCTACATCATTATcctagaaaa atatatttcaatttcattcaaaaatcc
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065691TCONS_00065691Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065691-proteinTCONS_00065691-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_443supercontigscaffold_443:36275..46151 +
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
TXNDC11PREDICTED: thioredoxin domain-containing protein 11 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
43.27 39.69 17.24 16.08 13.27 11.54 15.68 18.19 15.33 12.19 16.59 12.6 13.99 12.7 11.03 11.81 11.27 11.65 7.23 7.26 8.95 7.76 22.41 22.26 13.36 16.11 6.19 4.7 13.99 15.04