XLOC_041055 (gene) - C. hemisphaerica

Overview
NameXLOC_041055
Unique NameXLOC_041055
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_44:201701..205094-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_041055 ID=XLOC_041055|Name=XLOC_041055|organism=Clytia hemisphaerica|type=gene|length=3394bp|location=Sequence derived from alignment at scaffold_44:201701..205094- (Clytia hemisphaerica)
AAAAGTTGGGAGAAATTTGATATTTGACACTTAAGATATTCTGTCTAGCG
AGTGGTTCATAGACAGTACAATGGCTTCAATTTGTCAACGTTGGTTTGCA
CTGGTTCTTTTGTTGATGACGGTGGCCCAAGCTAAGCGTAAGTCAGATTT
TATTCAGTTTCAAAAATTCATCACCCCTTTGCATTAACACGTAATCGCCA
ATAAACTTTTTAGCTTATTTTGAGTTGTCTTGTCACATCCCTTACTGTGC
AGTGGCCACAAACATATCATGCCATTTATTGAGGTATAAATATTATGCTT
TTTTCATACAATAATTCAGAATTCGTTTAAACCATGATTCAAATCATATT
TTAGAGACAATTTGTCAAGGCAGCAACCACCTACAACAGAAATTTGCATA
TGAACCTACACTTTCATTTCCATCAAAAAATTATCCACATCTTGCCATCA
GCTATGACACAACATCAAAAGTATCCAAAATACTGGCGCCATCATCAAAC
TCGGCTTGGAAGATAGTACCAGGGCTTTGTGGCCAAGGGTTCAGTTTTGA
ATCAACAACACAACCTAATCATTTCTTAAGACATCGAAACTTTCTCTTGT
TCGTGGATCCTTTTGAAAATACCGCCCTCTACAAAAACGACGCTTGCTTC
AAACCTGTTGCTGGTCTTGCCGATTGCAATGAAGTCTCGTTTCAATCGAT
CAACTATCCAGACCGTTTCTTGCGACATCAAGGCTATCGAATGAAACTCC
ATCCAAATGACGGCTCGTCTCTGTTCAAGAATGATGCAACATTTAATATT
CGTAAGATTTAAAATATTATTGCAATTTCATCACTGTGTTTCTTATTAGA
GCCCAAATCAGTCGGAAAAACATAATTCCAGGAATGAGTTAATAAGTTCT
TTTTTTGCAATATCAATGCATTATCATTTAAAATTTGCTCATATAATAAT
TCAAATCTTATTTCAGAGACAATTTGTCAAGGCAGCAACATTCTACAACA
GAAATTTGCATATGAACCTACACTTTCATTTCCATCAAAAAATTATCCAC
ATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATACTGGCG
CCATCATCAAACTCGGCTTGGAAGATAGTACCAGGGCTTTGTGGCCAAGG
GTTCAGCTTTGAATCAACAACACAACCTAACCATTTCTTGAGACATAGAA
ACTTTCTCTTGTTCGTGGATCCCTTTGAAAATATCGCCCTCTACAAGAAT
GACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAAGTCTC
GTTTCAATCGATCAACTATCCAGACCGTTTCTTACGACATCAAGGCTATC
AAATGAAACTCCATCAAAATGACGGCTCTTCTTTGTTCAAGAATGATGCA
ACATTTAATATTCGTAAGATTTGAAATATTATTGCAGTTTCATCTTCATT
ATACACTTGCGGGCTGCTGAACTTACCAATGGTTCGGAATCGAGGGACTA
ATTCGCTAATACAGTGGACCTTTTTAATTCGAACTTCTTCTCAGGTCCCG
TCGCAAGGACAAACCTTCGTAAAATACTCTACCTATTATTGGAATCTCTC
CGCAATTCGAACAGATTGGACTTTCTTCTCAAACTCGAGTTATTGAGAGT
CCCTCAAGAGTTAACAATATTAACATAGTTATCCTGTATACCTCGACTGA
ATGAACATATATTTATCAACCAGGGTTCGGTAGTTTCGTAACCCCTGCCC
ATGTAAAGCAATTCAATCAGAAAACTAAAAGTTTGAAGCCCTTAGGGCCC
TTGGCATTTACACGCGAGCAGGTTTTACCACCAATCAAGTTAGCTTATAT
TTGTCAGGGCTAGCACGTTTATAGCCGAGCTCTTTTCAACAATTGAAAAT
TTGATCCCGTTGAATCTCATCGAATATTTGACTAAGTGGGCGGCATTTTC
AATTTTGCTTCAAATGCTCTAAAATTTTATACCAATGACGCAAGATTTTA
TGTAGTCTCCAAAATAAATACAATAAAAAAGTTTCTGTATCAAAGGTCAT
GGCCCTTAGAAGCCGGTATTTCAACCCCTCCACAAGTTTACTCGTATAGT
CGGCAGAGAACATGTTAGCGAGGCCTCGTGAAAAATATTTATGACCTGCT
TTCCATCATTAGACATGACTTGGAGTCGATTTGAACAGTTTGGGGGTTTT
TGAAATGTTTTTGGAGCCCTTTTAAAAGACAGGTTATGTGTATTGTAATT
CATATTCAAATCATATTTTAGAGACAATTTGTCAAGGCAGCGACCACCTA
CAACAGAAATTTGCATATGAACCTACACTTTCATTTCCATCAAAAAATTA
TCCAAATCTTGCCATCAGCTATGACACAACATCAAAAGTATCCAAAATAC
TGGCACCATCATCAAACTCGGCTTGGAAGATAGTGCCAGGGCTTTGCGGC
CAAGGGTTCAGCTTTGAATCAACAACTCAACCTAACCATTTCTTGAGACA
TCGACACCTTCTCTTGTTCGTGGATCCCTTTGAAAATACCGCCCTTTACA
AGAATGACGCTTGCTTCAAACCCGTCGCTGGTCTTGCCGATTGCAATGAA
GTCTCGTTTCAATCCATCAACTATCCAGACCGTTTCTTGCGACATCAAGG
CTATCGAATGAAACTCCATCAAAATGACGGCTCGTCTCTGTTCAAGAATG
ATGCAACGTTTAATATTTGAATTTCAAATTCTTTGGGATAAAGACTCTTC
TGTAACTTTTTGGACCTACCCCGGTGGAGGTCCTATAAATTAACCGTTGT
ATGTTCGTCCGTTCGTTAGTTACCAGCTTTTCTCGAGATTGGCTCATTAG
TTTTTTCTGATTTTTTGCACAAAGATGCATAACTATAAACCCTCGAATGT
GACGGAGCCTGATTTTCGAGAAAAAAATTTTTTAGGCAAATTTGGGCCAA
AAAATTGCTAAAAAACGGTTTTTTTGGACTTTGTGAAAAATTGGATTATT
AATTTTTTCTCATTTTTTCTATGAAAGTAGGGTACCATCATAGGTAAAAG
ATGGGTTAAGCAGATTTTTGCTAAAAAAATTTTTTGGCTCAAAAAATGCA
TGTTTATCTATAAGAATCACTATTAATAAGCATACATGTTCTTAGTCAAA
TTACTCAATTATTTTTATGAGATAGATGTATTTTTTGCTCATGAGGGCTT
ACTTTTGAAGAATATGTGTGTTTAGACATGAAATTTAGGCTGCTTGGTGT
GTTTTTATAGAAAAACTGGCCTAATTCGATATTTTTTTATAAGCAGGTTA
TCAATTACTTAGGTATTAGCTTTTCTCGAGGTTGGCGCTTTCATTCTTTA
TGATTTTTTGCACAAAGATGCATAGCTATAAACCCTCGAATGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065513TCONS_00065513Clytia hemisphaericatranscript
TCONS_00065512TCONS_00065512Clytia hemisphaericatranscript
TCONS_00065511TCONS_00065511Clytia hemisphaericatranscript
TCONS_00065510TCONS_00065510Clytia hemisphaericatranscript
TCONS_00065509TCONS_00065509Clytia hemisphaericatranscript
TCONS_00065508TCONS_00065508Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065511-proteinTCONS_00065511-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_44supercontigscaffold_44:201701..205094 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
9.03	8.29	7.51	8.53	1.94	1.17	2.91	3.58	1.78	4.2	1.51	1.67	57.41	47.39	25.11	62.34	18.07	70.85	42	56.44	5.68	6.1	4.98	7.55	2.85	4.93	24.6	20.41	6.01	6.34