XLOC_040994 (gene) - C. hemisphaerica

Overview
NameXLOC_040994
Unique NameXLOC_040994
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_439:202175..208749-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040994 ID=XLOC_040994|Name=XLOC_040994|organism=Clytia hemisphaerica|type=gene|length=6575bp|location=Sequence derived from alignment at scaffold_439:202175..208749- (Clytia hemisphaerica)
ATGGTTTCTACGCACAGATCAATATCAAGTAAACAATTGCAATTATTTCA ATTTGAGTTGATAGAAACAATGTAGAATGTAATCATTTTATGGTTGAGTA CGTTTACTGTTTTAAACACTAAAAAACACATTTTCAGCATGAAAATTAAT TTTTGAATGTTCAATCATGCATTGAAAAATATTAGTTTTGGACTTAATAA TTTTTTATCGTGCAATATTTTTTTTAACGGAATATTGCTGCAGGGAGTTC ATTTTTTTGGAAGTGAAAGATGAATTTTCTGAAAATCGCCTTCGTGGCGC TACTTATTGTAGCCCTGTGTTCGGGTATGATATTATTTATTTTATTCTTC CATTACATTAATGAGAAACAGAGTATTTCTTTATCAATATTTATAGTTTC ATGCTCTTCACAATCATTAGTTGATTTGAAATTATTTATTTTATTCTTCC ATGTCTTAACGAATTAACTTTAGAGATTTTTTTATTGGGAAATATTTTTG TCAATTTTTGCTCGTGTTTTGTCTCGTTATTTTGTGTGGTTCCTAGCGTG AGAACCTGATACGACTATTTGAATTTTTTATTTTGTTTCCACTTTTGGTT TTATTATTCGCTCTGTGAAATTGAAGTTAAAAAGTATTCTCATTCAATTA TTATATTTTCCTGATATATATGATTTTTTTAATGGTACCATTAATAATTT TTATCTCAGCCAAAAAGCACAAGAAAAGACATGGTTTGAAATCATTAGCT AAGGTAATTAACTAGATTTTTCTTAATTTGATAGTATACATACACTTTTT TTTATAAGAACATCCAAAATTTTTGAAGCCTTGGAATGTTCTTAGCTTTT TGGATTTTAAGCCTAAAAATCTTCTTAACATGTTCTTATTTTCGCTATTT TTTGAGAATTTTTGTCCATTTTCCTAAGAAATCGGGTGTTTTAGAGTTCT CAAAGCCTTAAAATGTTCTTAACTTGTTCATAATATTTTTGGCCATCAAA GCCTCATCTTCTTATATAGTTTGTTCTTATAAAAAAACGTGTATACTACT TTTGATTGAAAGCTTTGGCATCTCGCTCTTTTGATTTTTACACTGCACGT TTTTTTACAAGAACAAACTATATAAGAATGTAAGGCTTCGGTTAGCAAAA TTTTATTAAGAACAAGTTACAAGAACATTAAGGTTATCGTAAATGAAATT ATTTTAAAGAGGTTTCACTAAATAAATATCACCGAATTCCGCTCATAATT TGCTTCTTGTATTTTGACAGAAATCCAAGAAAGCGCCACAGGCGGCTCCA CAAGAGCTACCACCCCCACCTCCACCACCTCCACCACCACCACCAGGCGC ACCACCACCACCAGGCGCACCACCACGTAATATGATTCTTCTCATCTAAT TCTTTCTTTACGACTAATATTATAGAAAAATAAGCAAGTGGTTAATGATG GGATAGTTCATTCATAAAGCAACCGTCATCATTCAATCATATAAATGTCT CTCTGTTTTGCTCTTACTCAAGGCTTGTTACGCTGATGTTATGCTATGTA ATAAGGAGAGTGGCCTAATGCAAGCCCGGGGGGGGGGGGTACTTAGGCAA ATATGGATGATGGGTATGTGCGGACGGTAAGGGTCGTTTTTTTCACCTTT CTCAAAGTCTCTCTAAGGGTCGGAAAAATCAGAAAGTTTTAAATTAGTCT CTCTAAGGGTCGGAAAATTCAGGATTTTTGGGAAATTTTTTGATTTCCAG AGAAAAAATTGTAATAAAGTCTCTCTAAGGTTATGACTTTTTTCAAAAAT CGAAAAAAAATTTTTAATAAAGTCTCTCTAATGTTATGACTTTTTTCAAA AATCGAAAAAAAATGGTAATAAAGTCTCTCTAAGGGTATGGCTTTTTTCA AAAATCGAAAAAAAATGGTAATAAAGTCTCTCTAAGGGTATGACTTTTTT CAAAAATCGAAAAAGAAATTTCAAAAAGGCTCTCTAAGGGTCACCTTTTT AGCAAACAATCAGTCTCTCTAAGGGTCGGTTTTCGGAGGTCCCGTCCGCA CATACCCCTCATTCGCCAACCCTAGTACCCCCCGGGAATGCAAGTGACAA AAATTCAGAGGAGTCCAGTCCAGTCTTTATCAATCAAAAAAAGGATTAAG CCTGGGTACAAGGTTGTATAGCATAATATTTTATTATTTTTTTCTTGATT TAATTCAGCTCTTCCACCTTGCGATCCAAACAAACCTGATACAGTAGTAG GAAATAGGCCCGGTGTCGACTGTGGTAAGTTCAAAATTAATATTTAATAC CCTTCATTATGCTGTTGCTAGTTTTTGGGCAAATTTTTCTTTTTTCTTCA AAACATTTTTCACCTAGAATCTTTTGTTCTTTCTGTTCGAATTTACTTTA CAGAAATTTTAGAAAAATACTGCACCACCGTCTCAGTGGCTCTATGAGCT TTTTTAGCCGTTGGAGTGGAACGTATGTGAGGTGGAGAAGGCCTGTTTAA TGGGTGTGGGATTTAAAATTATTATGTTTTTTTTGTGCCTTAAAAATGGG GTTAGAAGTGAAGGGTGATGAGGGTCATTTTTCCAATTTTGATAATAGAC AGGGATTATTACTGCAGAGGAGTGGAAATTATACTTCTAAATAACCTACC TACCTATTATTAAGTATATACCAAATAAATACTATATAAAAAAATAGCTG AAAGAATTTATTAATCATTAAACGACAGTCCTAATTTAAAGGTACTTTTC ATAATAAAAACTATACAAAAGATTAAATAGCTCAGAACAACCCTTGCATT AATATTGATAAACTCACTGTCGAACTAGTCTTAGAAAATCCGTAAAACTT GACAGGGACTCGGTGTCATAAAAGTTTTGACTCTAATACATAAAGAATTT TTGGTTTTGAAGAGCATTTCGAAGGAGTATTTAAAGTAAAGGGGCGTTTA TAGTTTTAAACCAGCTTACTTTACTAAAGTGAATGAGAACCATATTTTAC TTCTTCTTTATTCTTCTTCACTCATTTACATTTGAGGGGATAAAATTATT ATCTCAGTCATCTATGAAATTTGAAATTTGAGGGGCCTTTATTCAAAGTG ATAGGATGAATAAAATAAAAAATGAAACAATTCTCTCTTTTTTTTTAGTT TTAAGTTTGACACTCATGAAAGCTAAATTTCGATAATAATTTGTAAATTT TATTTTTGTAGAATTACCACCAGACGCACCACCACCTCCAGGACCACTAC CACCACCACTAGACGCACCACCACCACCACCACTAGACGCACCACCACCA CCACCACTAGAGCCAGCACCACCACCTCCACCACCTCCACCACCACCACC AGCCAAGGCTGAAAGTGATGATGATGATGAGGAAGAAGATGGTTCCGCTG ATGCTGAGCCAGGTATGACGTCAATTTATTTTTCCACTTTAAGAGAGTGG TCAGAAAGTATCTACCTTAGGGTATAAATTATTTCGCGAGGGAAGATGTC TCGCGAAAATTAGTTGCCGCGAAAAATAATTCCCTTAAGGTACTTGGGGT GTCAAAATTTTTCCAAAAAATTCCATGTCTTTAGGTACATGCCTATATTA GTAGGGGGTGCCCAAAATATATTGAAATTTGTTGAGGATATCAAGGGATG ATGGAAATGTTTTTTGAATTTTTGAAAATATCCTCCACCCCACCCCAATA GATACTTTCTGACCACCCCCTAATAATACAGTGTGTCCGGAAAAGATTAG ACAGATTTTATATACATTCAGGCCCAATTCATCAAATGTCTCTTTGTTGG TTTTATATAGTTTACCACCATCCGTAATTGAGCTTTCAAAAGATTTTCAA AATCACTCGGACATTTATATGGTAGAATATACAGAGTCGGCTCCTCTTTT GAAATGTCCATCATTAAATAAAATTCAATACTTATTAACTACACTTTGAC AATTTTGAATTCAACTGGAAATTACATTGATATTGATATTTTCCATTATA TAGAACCTGCTATATTTTTTCCGAACACATTTTACGTTTTGATAAATAGA TTTGAAACTGTGAGGAGGCTGACATACTGGGTAGTAAACTGACTGTAGAA TGAAAAATCTTGGATAAAATCTTAACTTAAAACTAGGGGAATAAGATTTT TAAAAGTCCTATAATTTCATATAATAGAACTGCAAGCATAGTAGTCGTTT ATCCGCTGTAATTTGAATAGCATTTGACAGTCGTTGGAAATTGTATTTTA TTCGATATTCAAGTCCTTTTTGAGTCTTCAATAGTCGACCTATTATCCTG GATACACGCTTTTTTTATACAAGAATACACTTTATAAGAATGTCCATGAT GAAAACGGCCAAAGAATTAAGAATATAGTAAGAATATCACCATCATGGAA TTTAGCAACTGAACCTAAGAATGCCATTTTTAATGCATTTTAACCTACAG ATTGCCAATTTCGATCTTAACCTGAGAATACCGTAAGAATATTTTTGGAT GATTTTCGCCAAAAAGTTAAGAATATCCATGATGAAATGAAAAAACACCA TTCTTATAAAAAAAAGCGTGTAGTTGATTTGAGTTTACAACGACTACACG AAGTTTGTTTAGAACCCAGTCTCCTCACAGAGTAACTACATTTGTCTGCT TGATGACACCAAGTCCCTGTAAAATACAGTGTTCAAATGAAAAAAAATAT TACAGTTAATTTCACGGAGAGCGGCATTCAGTCAATATAAAGTCTTTTAA AAGGCGGTGCTTATACACTACAAAATTTCGATACTTGGTAAAATTCAATT CCTTAACCACGCAACTTAAAACATCCAAACCATTCATACATTACATTATA TAATTAAAAAAAAAAACTTTCATGCTTTCATGCTTACACGTAAAATTTCG TGCACTATTGATACTTGTAATTTTTTGAAATCATGTCTTCTCTTAACACA CTTAACACAAAATAGTCGGTGAACTTTTCCAGTATAAAACTTTTATGATG AAAAACTTTCACCCTAAAATTTGACGGATTTCATTATTCCACGAAAAAGA ACAAGCCATCCATACAAAAAACAATCTCATCCAAAAACATAAATACACAG GCAAAAATGAAAAAACCAAAACTTATTTTTCCTTTTTTTCTCTCTGCCTT AGAAATACCCGCCACTCAGCCTAAAAATGTCAAGTCAAAATCAGAGTCAA AATCCGTCAAAGCGAAAGGGCAGAAACGTAACCGGACTGTTCTCAATCAT TCAGTCACGTCGATAAGTCAAACCAAAAATGCACCACAGCACGCAAAATC GGTTCACACTACAACATCGCATGTTAAGAATCATTTGTAACAGTATCACA ATATATTTTTGATGTTTTGGATAGCGTTTAATAAAAAATAAATGAACATG TACTGTTCTACGAGCAAATGAAATAAATAAGATCTTAAACAAAAAACATC GTCTCATTTATTGTCTTCATAAACACAACCAAATCCACTAGAGTACAATA TTCAAAATACACAAGTGTTTCCTACTTCAGATGCTTGATGCCTTTTGGTC TAAAACTAGGATAAAGGGTCTATTAAGAATACTAAATTCCGTGATCAATT TGAGAGAGCTTTTCTTTGCTCTTCTCTTTACTAGAAGACGTGGTACAAGT ATCAAAGAAGCCCAAGAAAAATTCCAAAAAGCAAAAAGCAGGATCGCATC GGTCAACCGTCGTTACTAGTACAACAAACACAATACAACAACCCAAAAAT TCTCATGTCAAAGCTAAATCCACTACTAAATTTGATAACAAAATCACAAA GTCGAATTGATTTGATTTAGTGACTTTTTTTCTTTCTTGTAAAAACAGCA CCAATCGTTGCCCCAAAGAAACAATCCAAAAAGCAAGAAAAGAAAGTGAA AGGAGGTAAGAAGAAATTGAGCGTCCGCTCCATCGTTAAGCGGGCCGCTG AAGAAGCCGAAGAAGGAAGTGCTGAGCGAAAATCTGAAGTCGAAGGATCT GCTGAACGCAAATCTACCGTGACCGAAGAGGAAGCCACCAAAAAGAAATC TGAAGAAGGAGGCGATGATGAAGATGAAGATGACGAGGATGATGATGAAT CCTCGGCTGCCCCACCACCAGTGGTCGCACCACCACCACCACCACCGCCA CCATGTGACCCATCTGTTGATCCTAACTGCCCATACCCACCACCACCACC ACCTCCCGCAGGTCCACCATACCCACCACCACCAGGCCCACCAGCACCAC CACCGCCACCACCAGATGTGCCACCACCAGGCCCACCAGCTCCACAACCA GAACCAGCCCCAGTCCCAGAACCAGCACCACTTCCACCACCAGAGAAAAA GAAGAAGGGAAAGAAGACCTCCAACAAAAAGAAAGCCAAGAAATCCAAGA AAAGCAAAAAGCATAATTAAATTTCACTCGTCATATTTAGCTTCATATAA ACTTTGACATTCAATCCTTTACATAAATATGCACTGTATACCCGATATAT TTTTTTGAAAAGAATAAAATTATTTATTATCCAAATTTTTACAACTCAAA ATATATTTATTTAAATTAACCAAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065405TCONS_00065405Clytia hemisphaericatranscript
TCONS_00065404TCONS_00065404Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00065404-proteinTCONS_00065404-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:202175..208749 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
6.67 6.29 2.94 3.48 10.61 11.67 384.57 454.82 109.75 151.03 263.27 122.55 309.03 314.64 236.08 776.58 310.01 314.84 2.63 2.03 238.48 294.8 228.59 195.03 348.64 374.31 52.08 17.69 5.02 6