XLOC_040990 (gene) - C. hemisphaerica

Overview
NameXLOC_040990
Unique NameXLOC_040990
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_439:86729..94241-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040990 ID=XLOC_040990|Name=XLOC_040990|organism=Clytia hemisphaerica|type=gene|length=7513bp|location=Sequence derived from alignment at scaffold_439:86729..94241- (Clytia hemisphaerica)
TGCGAATTGAATTTTGAGGGTGGATGAGTTATGAAATTCTTAATGAGAAA
AACTATGTATAGGCTGAAAGTTTTCTTTTCATTTTGGCGTTCCTTATAAT
ATATAGTTTTTTTCATAAATTCATCAGCAATTGATAAAATAACTGAGCCC
CTGGAGGAATAACTGACAATTTGTAAGTATTTTGTATTTCCTCCGAATTT
TACTAATCGCCAATTTTTTTTAAATTCTTACAATCATAAATAGCTTTCAA
AAGGCGCTAACTTTAATAGAAGTAAATAATAAACAGCTACTATTAGGCAC
AGAGCCGCATTGTGGGTCCTAGAATCAGAAAAAAACCCTGCAGTCGATTA
AAAAAGTGTGTTATCCTTTTTAGGGACAATGTGTGAATGATTGATAGATT
ATGAGCGAATGGAGTCACAACCTATAACCCATACTTCTTCTTTCAGTAAT
ACGTCTCAATATATAGTGTGTCCCAAAAAGTGGACACTTTTAAATAAAGT
AAAATCGTCATGGTTTTTTTGCGAAATTTTATGATTTGTATACTTAATCT
TTCTCCAAAACGTATTCTACTTAATATCAAAATTTGTCCGCTTTTTTCTT
TTTTTTTTTTTGGGGGGGGGGCTCACTATAGGATAAGGGCCAGGGCAAAC
CAGTCCAACATTTCATCCAACATGATTTTCCAATGTTGGATGAAATGTTT
GATGGAAAAACTTGCGTTGGATGAAGCAAAAATCAAGGCCGGGGCAAACC
GATCCAACTTTCATCCGACATGACTTTGAAAAAAATGAAAATTCGAAAAN
GCGATCAAACTTCATCCAACACCGTCCAACACGATTTTTTTCTTCTTTTT
TTGAATTTTCATCTTTTTCCAAAAATTTGAATTGACGCAAACTGGTCCAA
CATTTCATCCAACATCAGAAAAAGGCATGTTGGATGAAATGTTGGATCGG
TTTGCCCTGGCCTTAAGGAAGCCGTGGCTGGAATGAGTACATCTGAATTT
CAGTGTCGTAAGAACGAATTATAATCAATAGGCTGTCTCTTTCGTACTAT
TTTCAACGGAGCTAAAATTACCCATTGCATTTAGCTATCGACGTTATCCC
TTTTTTGTAAGATTCCGAAAAAATCCAACTTTAGAAGCGCCTCAGAATTT
AATTTCTAATCCAGTTGTTCATCCTCAATTCACAGATAACTGAAAAAATC
GCATTTTCTCTCAATATTTTCACAACATTTAAGATTTAACGATTTAAAGT
CAATCCAAAGAAAAATCCTAATACTCTTTTGTTATTTCAATCTATTTGGA
ACATAGGACCGAAATTATTTTCTAAAATTCCAAAGCTGAAAAACTCAAAT
TTTCACTATTAGAAAAACACTAACACGATTTGAGTTTTGCATAGTGTTCG
ATTATTACACCCCTCTTTCACAGACCCGCTGGGACCCCAGCCTCACTTGA
AAATTTGGCAAAAATTTCGTCCCCGGTGGGAAAATATCCTGGAATTTCAG
CCCCATTGGGAATTTTACTTTGATTTCATTCAATGAAATTCAATGTTTAA
AAATGGCACTCCAAAACCATCCCCACTGGATTTTTTGACCTTAGAACAAT
AGAATTTCTATCCCCATTAGAATTTCAATAGAAATGTTTATCCCCACTGA
GGAAGAAAGTTCCACCAGGGGGCTGTGAAACAGGAGTGTATTATTGATAG
ATGGAGAATTTCAGTAGATCGGACCTGAGAAAAATACTGGTCCTAACAGA
GAATAAGTTACCCTTACAAGGACAAGGTGAAAAGTGACTCTTTCCGATAT
TTTCCGATTATTCATCGATTGGATATAGTTATCAATTGTACCGAGTGGGA
GAGTCTAAAAATGACGCATCGCCATAGAACAGATATATAACTTCGCGCAC
TTATAGATTGACACCCCCTGCCATAAATTCCTCTGTGAAACACTTAATAA
AGATAATCTGTCTTACAACACAACTTGATATCAAATATCAACCTCCTTAT
AAAAAACCATGGTCTGGAAGCCTTTTGTTTATTTCCGNTCCAACACGATT
TTTTTCTTCTTTTTTTGAATTTTCATCTTTTTCCAAAAATTTGAATTGAC
GCAAACTGGTCCAACATTTCATCCAACATTAGAAAAAAGGCATGTTGGAT
GAAATGTTGGATCGGTTTGCCCTGGCCTTAAGGAAGCCGTGGCTGGAATG
AGTACATCTGAATTTCAGTGTCGTAAGAACTAATTATAATCAATAGGCTG
TCTCTTTCGTACTATTTTCAACGGAGCTAAAATTACCCATTGCATTTAGC
TATCGACGTTATCCCTTTTTTTGTAAGATTTCGAAAAAATCTAACTTTAG
AAGCGCCTCAGAATTTAATTTCTAATCCAGTTGTTCATCCTCAATTCACA
GATAACTGAAAAAATCGCATTTAAATTCATTTTCTCTCAATATTTTCACA
ACATTTAAGATTTAACGATTTAAAGTCAATCCAAAGAAAAATCCTAATAC
TCTTTTGTTATTTCAATCTATTTGGAACATAGGACCGAAATTATTTTCTA
AAATTCCAAAGCTGAAAAACTCAAATTTTCACTATTAGAAAAACACTAAC
ACGACTCTGAGTTTTGCATAGTGTTCGATTATTACACCCCTCTTTCACAG
ACCCGCTGGGACCCCAGCCTCACTTGAAACTTTGGCAAAAATTTCGTCCC
CGGTGGGAAAATATCCTGGAATTTCAGCCCCATTGGGAATTTTACTTTGA
TTTCATTCCCTTTCGAAATTCAATGTTTAAAAATGGCACTCCAAAACCAT
CCCCACTGGATTTTTTGACCTTAGAACAATAGAATTTCTATCCCCATTAG
AATTTCAATAGAAATGTTTATCCCCACTGAGGAAGAAAGTTCCACCAGGG
GGGCTGTGAAACAGGAGTGTATTATTGATAGATGGAGAATGTCAGTAGAT
ACAAGTGTCCTTGGTAGATCGGACCTGAGAAAAATACTGGTCCTAACAGA
GAATAAGTTACCCTTACAAGGACAAGGTGAAAAGTGACTCTTTCCGATAT
TTTCCGATTATTCATCGATTGGATATAGTTATCAATTGTACCGAGTGGGA
GAGTCTAAAAATGACGCATCACCATAGAACAGATATATAACTTCGCGCAC
TTATAGATTGACACCCCCTGCCATAAATTCCTCTGTGAAACACTTGATAA
AGATAATCTGTCTTACAACACAACTTGATATCAAATATCAACCTCCTTAT
AAAAAACCATGGTCTGGAAGCCTTTTGTTTATTTCCGTTATTTCTTACTT
GAACTTGCGTTGAGAAATTAGTTTGTTTTGCTCACTTTTTGATCATGTGA
TTAAATCTTTAACCAATCCCAAGAGAAGTACTTGGTAACGTGATCAAAAA
CCGAGCAAATCGATTTTCGTCCTTTGATAATAACAAAGGAAAAAGCTAAC
AAAAAGTTAAAACAATAAGCTTCCAGACCAGTGTTTTTTATACGGACTAT
GTATCAACAAATATTTCTACCTGTAAAAATCATACTTGTCTGTATTTATT
TTTGTTGTGTGTAGTGATGTTCAAGAGCAACTCTTTAATTGTAAGATTCC
TATCACTTTATTCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
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NNNNNNNNNNNNNNNNNNNNNNTCAAGTTTCTGAAAACCAATCTCTTTTG
AAAATAGTTCCATTCATGTATGGAATATGCTGTGAAAATTTTAGAAAAAC
AGCTTAACTGAAACTGAAAATATTAAGCTGTGAAGTTAGTTTTCTCCGAC
ATTTTGCAAAAAATTGACAGAATTTGCCGTTTTTGCTAATTCAGCGAAAA
ATTTTATATGTAATATTAATTTTTTGTTATGAACTATTATTTCAAGCTGA
TAGAAATGGAATTCCAAGATTTTTTGCTCTTTCTCATATTTAGAATTTTC
GGTTTTTTCAAAATACTGGTTGACCTTTAAGATGCTATATCTTTTACCCG
TCCTCTAAAATCACAGATGTATCTGCAGTTTCTGAAAGGTATTAGGTGTA
GAAAGTTTCTTATACCCCATTTTCATAACTTATTTTCACTATCCAAGGAG
CTAGAGTGGGTTATATGCAATTTTTGTCTAATTTTGGTGTTGAAATATGT
CCTTCAGAGGCAAATATGTTATTTTGAAGCTGTCTCAAACCATCAAAAAC
ATGCTCATTTTTAAGTATGACCAGCATTCTTTCAAAATCAAAAAAAATCG
TTTAATTCTGATAAATCTACAGGTCAAAATCCTCATTTTAATGACGACCT
CCGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTATCCAGTTT
GATTCCATGCCTGGCAGCAAAAGTGTTTTCTTTCATCAAAATATATAAGA
CCATATGGTCATATTTTTTCTTGTTTTCATGATTGAATCTTTGGTCAAAC
ATTAAGGAATATTCATTTATTGTTATTATACCTGTTTTTTTTTTATAGTT
CTTGAATTTTGGCGGTAAAATCGACCTAGAATCCTTTTGTATGAAAATCA
CGCAACTAATGTAGGAAATAATGGCTTCAAATCTTGCATAGTAGATTACC
AAATATCCCTGTAACAAAAGATGAACGGCCCTTTTTCATTTTATGTTCTA
GAAAANTTTTTAAGTATGACCAGCATTCTTTCAAAATCAAAAAAAATCGT
TTAATTCTGATAAATCTACAGGTCAAAATCCTCATTTTAATGACGACTTC
CGTTTTGGGGGCCGTCTCCGTTTTGGGGGCCATATACTGTATCTAGTTTG
ATTCCATACCAGGCAGCAAAAGTGTTTTCTTTCATCAAAATATATAAGAC
CATATGGTCATATTTTTTCTTGTTTTCATGATTGAATCTTTGGTCAAACA
TTAAGGAATATTCATTTATTGTTATTATACCTGTTTTTTTTTATAGTTCT
TGAATTTTGGCGGTAAAATCGACCTAGAATCCTTTTGTATGAAAATCACG
CAACTAATGTAAGAAATAATGGCTTCAAATCTTGCATAGTAGATTACCAA
ATATCCCTGTAACAAAAGATGAACGGCCCTTTTTCATTTTATGTTCTAGA
AAATGGCCCAACAACGTCACATGCAAATATTTGCTTTGCCACCACCACCC
CAACCACCACTACTACCACCGCAGCACCGACAACCTCCACCACGACAACC
TCCACCACGACAACCTCCACCACGACCACTTCAACCACGACCACTTCAAC
CACGACAACCTCCACCACGACCACCTCCACCACGACCACTTCAACCACGA
CAACCTCCACCACCACCACATCAACCACCACCAGTTTTTCGACCGATGAT
GGCATTACCGCCC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00065394TCONS_00065394Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_439supercontigscaffold_439:86729..94241 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
24.38	24.5	5.31	5.54	1.69	0.5	0.2	0.75	0	0	0	0	0	0	0	0.1	0	0	0	0	0.15	0	14.16	13.48	0	0	0	0	10.93	11.31