XLOC_040587 (gene) - C. hemisphaerica

Overview
NameXLOC_040587
Unique NameXLOC_040587
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_421:138539..147966-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040587 ID=XLOC_040587|Name=XLOC_040587|organism=Clytia hemisphaerica|type=gene|length=9428bp|location=Sequence derived from alignment at scaffold_421:138539..147966- (Clytia hemisphaerica)
CACGACATGAAGGGGCCGATGGAGCAGGTCCCAGTGGATTGCATTCTGCT TCTAGCTCTCTTCTTGAACTTACAGGTACAAATTGTCAAGCGCATCCCGT TTTTCATTTTACTTTTGTAGAGAAGTTCAAACCTCTCCCACTTCACTTGA GAAACTGTTTACCAAAGTAACCAAAAAAGTAACTAGTATATGCCTGTTCT TGCCATTTCTACCTTAATGGAGATTAAAAATGAACCTTTGGATGTGACTA AGCCTCGGCGTTTCGACCGGAATGATAGTGACTTTTTGTTCAGCCTCCGA AAATCAAGTCCTTTAAAGGGTCGAAAAGTTCTTGGAATTTTGACTAAGTT TTGATATCTTTGCTGAAATTATTGAAGAATATAGTTCTAAAAACCTCAAT CTCTCTACTAACGGTCGATATTTGAACTTTTGCCCGTTCATATCCGTCAT CTCGTTTATCTAGTACTACTACCTCCCAAGATTAGATAAGATATGCAGTG TTGCAACTTTTCTGTCTGTTGACAAAAATCCATCCAGGGGAGTTTTTCAT TAGAATTTTTGTCTCAATTGTAAGCTTTGGAAGAACGTAATTTTGTAAAT TTTTTGTTTGATGTTTAAAACTTTCGTTTAAATTCAATAAAAGTTATTTG CAACACTTGATAAGATTATAAATAAGATATCAGATAAACGTGGACAATTA TATTTATGCTTTTAACTTTAGTTCGGGGTCGAGGTCGGGGACGCGGAGGT CGCCATTCATCGCATCGCTGTCCCATCTGCTTATTGTTGTTTCCAAGCCG AATGACCATGATCGAACACAAGAGAAAACATACCAAAGTACACAAATGTA AAATTTGCAATGAAGGTAATATCTTATTTCCTTTTTCGTTTGTCACAGCA ATTTTGCATCGTAATCGTGGACACCGTGGCAATCGTATTACTCTCCGTCA ATATGATAGAAATAGAACTGGTTGTTGAAAAGGTCTTGTGTCGCCCTCAC TAGCTCACGCTACACTTTGACGTCGATCAAGATTTTACAGTATTGCTCTT TAAAATTATTTAAACATTTAGTTTAGGGTTAGAGAAATCGGTTCTAATAC TCCGAAACATTCGGAAGCTTTGGTACTCTCATTCGTCTTGTAGTCACGCC TTAAACATTTTGAATAAACGACGTTTAGCTTCAGGGGGGGGGGGTCAGGA TCCAGATACCAAACCCAGGGCCGGGGGTGGTGTCAATTTTTTTTTCAAAT TTCAAAAAGTCAAGTTGGTATCGATTCCAAAATGAGGGGGTGGGTCCCCC TTTTTTTGAAAATAAGGGAATTTTTAAGTTGGTATCGACACCAAAATGAG GGGGTGGGTCCCCCTTTTTTTAATTTTTGCTGAATTTGAAATCGGTATCT GACTTAAAATGCTGTATAATGTAAGTATAAAAACTTATTTGAATCATTCT TCATTCTATAATTGAAATTAAATTAAATTGAAATTAAATTTTTATTTAAC TTTTGCTGCTCTCAATTCTTTCAATCAACCAAAATTCATTCAAAACTAGA GTTGAACAAAGTGAATCAAGTCTTAACAGATCTTTTTTCTGTATCTAACG TTAATCATACATAGGCTATGTTACAAAGACTCTAGGTGTGCCTAATACAA TAAGTTTTTTATCTAGTCTAGTTTATCAACTAATTTTATGAATTTGATAC ATTTTGCCAATATAGTTCAAGAAACTTAATTTACGTTGTATCAGAATGAG AAAAACTTGTTTTAATTTTCAGGAGTCTAAAGTGTGGTACATAGTATAAT TAAGTGATTAATCAGGATTAATAAGAGGAATATTCTTTGAATAAAAACAT TCACAGATTTGTTTAGCATCCCTTGTATGCAGTATCCTATGCATATAACT TCTTGCATTTTTACTGATTGCCAATTTAGGGGGGTGGGTCCCCCTTTTTC AGAAAAATCAGGATTTTCAAGTTCGTATCGATACCAATTTAGGGGGGTGG GTCCCCGCTTTTTTAGAAAATTGGGGTTTTCAAGTTGGTATTGATACCAA TTTAGGGGGTGGTGGTGTCTACTACTTTTAAATCTCGAAAAGTCAGGTTT TTGGGCCCTGGGTTGGTATCCTGGACCCTGACCCCCCTGTTAGCTTACAT CTGTATATAGTAGTGGACTCGTGATCAGTAACTATGTTTTATTTTCTTAC AGGTTTTTACACGGAAGACCGTCTAGAGAAACATGCAACCAAAGAAACAC ACAGTCACCCTTGTGACCAGTGCGAGCGGTCGTACGTCAACAAACAATCG CTCATGCGTCACAAATTATCTCACTCTGAGAAAACACACAAATGTGATCA ATGTTCGCGCGCATTCAAAACACCGCGTGAACTCNTCTCACTCTGAGAAA ACACACAAATGTGATCAATGTTCACGCGCATTCAAAACACCGCGCGAACT TAAATACCACGTCGAAGGAATGCACTCTTTATCACGTGATTTCGTTTGTG ACGTTTGCCAAAAAGGATTTTCACGGCCGGAGAAATTGAAACGCCATCTG ATGATCCACGCCCCAGACCGCCCTGTTTACACGTGTCCATTCAAGAACCA CGTCGGCTGCGATAAGACATTCTATAGAAAAGACAAATTGACCAGACATT TATATTCACACTCGAAAGTCAAACCTTTCAAGTGTGACCAATGTGATAAA TCGTTCGCCCGCACGGATAATTTGAGAGAACACATACGCTCTCACACAGG TAAGGAGAAATACTTGAATTCATTTTGGAAGACCATGACGAATATTGCTT TTAGAAAACTCGAATTCTCTTCCGAGGAAGACTATCGTTTTCCATATCGT TTTAAAGAAAAAGAAAGTGATGTTTAGTTAAATTCAACCTGTACCATTAC AGCATTGATATTCGAGACCAAGGAACTTTAATAAAACAGTAAATCTCTTT ATTTAAGATTCTTGCTGAGACTGACTTTTTCTTGTTTTGCGGAACTTTTT TTGAAATACTTGAATTAAAGCCATGCCACCAAAGTTCAACTTTTTCAATC TCTACACAGGTGTGTTCCGTTATTATTGTACTGTGTGCGGAAAAGGACAA CCAGGACCCAAGAAATTTCTTCAACACATGCTCAAGCAGCACAACGTAGA GAATGCAGAAATACCACGCCCCTTTGACGATGCAGCTCCTGAACCACTCA TTCAACAACACAAAGCTGTCATTGAAGCTGAAGCTGCCGCCCGCTTAGTC CGTGCGGCCAATAATGTTAAGAAAGACCAAGGAAAGGTTTGACATGTTCA ATTGTTTAAAAGTTTCGTTAGAGGTGTCTGTCGGAGTGTTATTATTTTTC TCAAAATCTTCTACAAATGACATGAACAGGTACAAAAAATATTGAAAAAC TTCAGAAAAGTCGAAATAATTTAATAAAATATGCCCTTTTACTTAAGGTT GTATGCATTCAAAGTAAATAACACGATTAACTTTTCAGAGATAATTAGAT TTCTGTCCGATTTCGAATCAGCGAGAATTGACTGGAACACAGTACGTAGA ACCATAGAACACATAGATTTATCATTTTCTGACTGGTTTTTCTTCCACCT CAATAGAAAGTTCGCAAGGAGAATATCGAGACGACGGAGATTCCGTTAGA TGGAGCGGTTGCCATAGCAGCAGGGTTGAACCCGATGATCCAATCAACGC TCATGCCCAGTCCCACGCAAAATGTGACGTCAGAACAACAACAAGCCTTT GTAGCAGCTGCTTCAAGAGGTATGTTTTATTCTTAAAAACCAACGGTAAA TTCAAGGTCATAGTAAACAGAGAGTATCTATGAATTTAACTATATTTTTA TATGTCTATTCTCCTGTTTTATATAATATACCTACTTAAAGAAATTCGCT AACCTATATACAACTTTCTACATCTCAATCTTCTTCTAAAACTTATTTTT CTGCGAAAAACATAATATTCGCTTCAAGCATATTGATTTGAAAAGTTTCT CGGATTAATTCCCCCAAGACGTACAAAAGCCCCATGTTCTATATTTCAAA CAACCAGGAAAAGGCTTATGTCTATGCAATCTTTAAATGTTAAGTTATTA TTCTTAATCCTTAGGAAACATCGAAACTCTATACACCATCAGTCACACCG GTCAAGGTTCCGGTTCTCCGCAATTTCAAATCAGTCGGGCACAAGACACG ATGGTACGTAACGAACAACTACTACGTGAACAATTGGCACGTGAAGGTCT CACAACTCGAGAGGTTGCTATAACGTCTGCCGGAGCTGCAACTGGAGCTA CAGGACGCGATTCAACGCAAACGGCAGCCGCTGACGCAACCACAACGGAA CGTCTCCAAGAAGTCATAACAAGGCAACTGGCAGAATCGGCCGCAGCGAC GCAACAGGGCCGTGAACTGGAAGAACCCACCATCTCTATGACGGTAGACC AAGACGGTAACATTACAACATCAGGGCGTGGTCTTCATCTTCTATCCCAG GGAGTCCTCCCAGGACAGCTAGCAGGACAATTACAATTCACGACGCTCTT GAATTCTGACATTATAGCGATCGGCGAGGACGTGATACGACAGAATCGGA ACGGTGTGCTACCAGCTATGTTTCAACAGAAATTTGGAAACTAGTTAACC GTATTATCTTCCCCGTGGTATGATTCTTTCTTCATTGTTATTAAGTTGGC AACTGGAAAGAACCACTGTCGGTTGGCTATGTACTTGCAGTGACTTTGCT CGCCTAGATCTGATATAGGTCTGTGGCAGGGCTTACAATTGACACCGCAT ATGACATTAAACTATTGTCGTTTGTGCAACTAATTGGAAATTTTAGTTTT ATATGGATGAACTAATCGTGTTTTTTAATTCATATTTAGAGTTCACATGT TTTCATGAGATTTATGAGAGTAATTTAAAGAGGTGAAGTGTTTCTTCATT TTTGCCTCTTAAGAGATGGCTTCCGTACCTTCAATCCCCCAAAAAATATA CATCATAGTTTTTAAGCAATTCTAAACTCTTTTGAAAGATCACAATCCAT CCCACCCCACTGTCAATGTTGAGTCTGAAACTGAACCATGGGCCACGCAC TTTTTTTGCAGACCATGCCATACTTTTTTTAATAGCTACTATTTTAAGCC ATAAAAAAAGCCATAAAAACTATTATTCTCCCCAATTAGATAAACGTTTT AAGGTGTTTTGAGCGTGTAAAAAGTGAAAAGATTTCTTCATCGCCCAACC ATGGCGGGCGACAATTTTTCCAAAATGTTCCCCCCCCCCCCCACTCAAAA TAGCTCGCCGGGGCCTATGTCAACGCTGACAGTAGGGGATGGGGGACGAC CTCTGGTGTCTCATAATTCAATTAGGGGATTTTCGGAAGAGAAAATAAAT TCTTAAGAAAGTTTGACTAACGAAAAAATCGAAAAAAGTTCACTTGATGG CTCTATTAAAATATTCCAATTTTATGGGAAGGTTTCCAATTCTCGCTCGA ATATTTCAACGGGAATCAGGGAATTTAGCTTCCCTATGGGATTTAATAAA CTTTTTGCTTTTTTTGGTTTTCGAGTCGAAGTTCGACAATATAATTTAAA AATTCAACACCGTCTAAATTGAAAGTGCTTTCAATTTTCACTGGATTTAC TTATTTTTTATCTGCAAACTTAAAATACAGTACTTTATTTATTTTACAAG TGGAAGATCTATTAGTTATTACTTTGTTTCTTAGTATTTTTAATCATAAT TTTTTTAAGTCAGAAATAACGACGTGCAAATTGAAAATAAATACTATTCT GAATTTAGATTTTAGATTCTTTATTTAAATACGTCATGCAAAAAAATTAA GTTTTAGAAGACATTAATTTTCATAGAAATGTAGATTCCAAGCTGATTTT GGACTTATTGTGGAGTTAATCAGAAAAATATGAATATTAAGAACAATTTA ATCTTTAATTAAGAACTCTAATAAGAACAACCGAACCTCGGCTCTAATTT ACTGGGGCTTCTTAAAGGAAGATTTAGATTCAACTACTGGTACAGTGGAT TCGCCATAACTCGAACGCGCACGGGGGAACACAAATTTGTTCAAATTATG GAAATTTCGAGTTATGGGGTGAAGGGACCAGAAAACTAGTTCGAGCTAAG GAATCATTTTAGTTATAGAGGTTCACTGTATCATTTTTTATTGGCTAGAG GATTGTGACGCACAAGACAAGTTGAAACTTCCAGCCGCCAGATTGAATAT TTAGTTTTTTTCTTCTCCTGAACTATGGATGGAAACATTTCGAAATTTTC CCTAACCTAAAAAGAACCTCATTGAAACATAAAAAGAAATGAACAGAAGA CAAATTACCGTAATCGACATTCTCAAAAGAAACTCTTGTTTTTGAATGAA AAATGTCCCTCTCTACTTAAAAAAAAAACAAAATCAATTTTTTCCAAGAG GAGAAAAGTTTGTTGGGACCCGATTTGATGTTCAAAAGTCCACTGTTTTG TCTAGAAACATTTAAGTGTTTTGGTTGATTTTTATTAATCTTGTGTCATC TAAGCCGAATATGTTGAAATCACTAACTGCATGCTCTTTCAGGTAATTCG ATTTTCGAATAAATGTGAATGGAAAGATTTCAGTTGACGCCTGCTTATGT GAACAATCTTATGTCCAGGTTGATACGCCATTCCATTCCTTCTTTTTAAT AATAGCTATCAACATGCTATCAACAGTTATAATTTTCTGAACTGTTTGGC TGTCTTTATATACCTCCATTTTTAAGTAGCCTGAAGACTTCAAAGTGGGT TGGATTTGGGTTCAAAATTCGATAAAATTATATTATTGATAGGGTGGTGC CTGGAGACTTAAGTTTCGAGATCTTTGGAAACCTCGAATATATTCGGATA TGGCTGTTCCGTTGGCTGTTTTATTCACAAACATTTGACGTTTTGGATAA GTTTTTGCTACTACTCCAGTCCTTGTTTAGAAGAAAGAAACAGATGCTTT TTCTTTTCTACAGCTTAAAACCCTTCTTTATGACAAACCTTTTCCACAGG TTTCTTTTAAGAGCCCCATTCATGCAATCACGCAACCCCCAGGTCAGGTC AAGCAACCTCTTCTCAGACCCAATGGGACCCCTTCCAACTGTAAAAATTG ATCAAAATATCGTCCCCATTGGAACATTATACTCTAATTTTTGTCTCCGC TAAAAATAATGAGATATGCAATTCCTCACCTGCGAATGTTATGCTATTTT TTCCATCCCACTGAATTTTCTGACTTGAAAACAATGGAATTCAAATCCCC AACCATAAAAAAACATAAACCAATCCCCATGAAGTTTTGGTCCGTTATTT TTACCCCCCACTGGCTGAAAACATCCTACCGGGTCTGTGATCAAGGCAAC CTCTATATCGGCTTTTTGATGCTTTGATAGACAATTCTCTGGCTTCAATC CGTCTTTGCTTGGATACCCAGCTGGCACACAACGTTGTTTCAACGTTCAC CTAACGTTATATGGATGTTGTGAACGTTAGATAAACGTTGAATGTTGGAT ATGGTACAGTAAGATGCGCGTTTAAAACTTTCCCAGAAATGGAAAGAAGG GTGACAGCTCGGTAGTTGCCTGGGCTTTCTCTGCTGTATTTTTTAAAGAT TGGTCTAATAATCATTTTGATGAAGTGGGTTGGAGTGTCTGTTGAGTTCA GGATTTTATCAAATATAATCTTCAGCATATCAATTACTGTGTCTCCTCCT GTTTTCAGCACCTCTGGTGTGATGCTGTCGGACCCAGGGGCTTTGTTGTT TTTTAGTGAAGTGATTGCTTTCGAAAATCTTTTGATATTGAAAACTCGTT GTCTTTGGTATCGGCAGAAGGGTCGTTACCCGGGGGGGGACTAGGGTTGC GAGCTGACGGGGGGTGCCGCCCGACTTTCGAACTTTGGACCCTTACCGGG ACTAAAAAGGAGAAAACAAAAGAAAATTTTNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNCGGGGGGGGGGGGTACTAGGGTTACGAGCTGACGGG GGGTGCCGCCCCCGACTTTCGAACTTTGGACCCTTACCGGGACTAAAAAG GAGAAAACAAAAGAAAATTTTGGGAATTTTACGACCATTAGCGGGACAAA TTTGACCAATTTTGACCAAATTTCGATCTTTCAGGGGGTAAAAAGTTGAA ATTTTCCTATTTTTCCGTCCCTTAGTGGGACTGAAATTTGATTTTCTGAT TTTTCCGACCCTTACCGGGACTTTGGAAATCCAAAGAAGGTACCCTTAAG GGCGGCACATAGCACATACCGTACCCTCCATTTGCCTAAGTAACCCTCCC CCTGGGGTCGTTATAAGAAGTATATCTATAGAGGTCTGGCTATTCAGACT ACTTTACCTCCTTTTGGCAAGTTTTGTCTTTATACTTTGCAATAAATAAA CTGCAGTATGGTCTATGATGTGTTTTTGGAATATCCTGGACTTGTTTTTT AAGATGTTTTTCAGTATTTCAATTTCATAGGATGTTCTCTCAGATCAAAG AGAATTTTCAATTCATAAGTGTTAACAGTTAATATAGTGGGAAGAATTTT CATTTGTTCTTGAGAAAGATAAGAAAACTTGTTTTTCTTTAAGGGAGATT TTATTTTTCCTGTAATACATAAGTGATGACACCCACGCTAGGTGTCGTAC TTTAAAATTTAAAATTGTGTTGTGACACTTTTTCACCTAAGTCCCAATAA ATAAATCATAAATCTTCCTTAAAAAACAGAGTAACAAACATCATAATATC TGTATACGTTTTTACGGTAAAGAGGATTGGGTTGCATGCAGTAGTATATT TTGCTTCTCGTAGCGTAGTAATTCCTGATATTCATGACGTAATATTTTAA ACGGAAACACCCGAGAAATATGTTTTTTTTGCGTGTGTATAAAAAGATTA CGTCTAGTATCAAGATTCAATGTACACTTTCTTGTCTACGTTGCCGATAA TTTTTCCTGAAGAGAAATCCAATAGTCTGAATCGCAGAACTCTACATATA TAATTCTTATATCTACCAAAACAATAAACAGTAAAACAAACCAACAAATT AAAGTCGAAAGGAATTTAAAACTTTAAAATTTTGTGATATTTCGACACTT ATCACGCGTCTATACTTCTTATATCTATAAGAAACTCTATTCGCTAGAGG ATGAGCAGAAGCCTACTGCGAACTTGGTTTTGAAACACAAACAATAGAAA CACAACCTTTGTGCTCTTTTTTTATATGAACCAGTAAATTCTTAATGAGC CTCAGTGAGTCTCATTTTTGCACTCCAAGTCTAAAATTCTTCTTATCCTA TTCTTATTTCTTTAGGGCAAAACTGAGGTATTTCATGTTTAATATGACCA AGGGAACGATTGTTTTCAAAGTTTGGAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064705TCONS_00064705Clytia hemisphaericatranscript
TCONS_00064704TCONS_00064704Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064704-proteinTCONS_00064704-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_421supercontigscaffold_421:138539..147966 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.11 14.74 8.75 7.6 8.52 6.31 15.59 18.5 11.11 12.87 12.44 9.87 13.27 15.47 10.46 12.48 17.69 16.43 10.83 9.63 12.85 14.75 15.38 15.19 18.04 17.49 5.41 6.38 11.98 12.16