XLOC_040451 (gene) - C. hemisphaerica

Overview
NameXLOC_040451
Unique NameXLOC_040451
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_418:233720..240450+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040451 ID=XLOC_040451|Name=XLOC_040451|organism=Clytia hemisphaerica|type=gene|length=6731bp|location=Sequence derived from alignment at scaffold_418:233720..240450+ (Clytia hemisphaerica)
TATTTTACATAcatcttttgatttttagagtaaaaaaaaattatgtgaaT AGTcaggaaaaaaatgaatttgaatgaagTTCATGTTGTTCGTCTTCAGT GGCCGGGAATGGTATACCATACATTAGCTCAACCTCTTATCATCTTTCTG GAATCATTTTGACATGGTCAATGTAATGATCAATTATAATGGTTATAATA AGgtaatttgaattattttgatatttcttgttCCCATCAAAACTCTTACT GTTATAAAACCCCAAGTATTTTGTAAGCTTTTTTATACACAACAGCTTAT TTCGTATGTGCATACTGtatattttctgtttttctgatacttcaatattt tttttcaatccaaACTCGATTTTCTCTGTGCTAAATGGGTAGaatatatt ttaaggctttaaatCCTGGAAAATTAGCTGAAATGCTTTGCCTATAGTTC TCTCACCCCATACGATTGTTTACAAACTAGGAACCAAAAGGTGGTCATCT GATCGCGAGTTTTCATGAATGATTTGATATGATTGACAGGAAATTTGAAT TGGGCGTTATGACAAATTACTGCTGTGATTTTGTTAACACTTACGagaag tttcttttttttaaatcgttgCACTTATTGACCCTTTtccatttcaaaat aaacaataaaatgatgggaaaagttgaaactgtttttatttttattgtaa gCAACCAATTAGGCGACAGGGaaaggaaaagttcattttgAATACAtgcc aaaatatattttattcccATACAAAAATACATGGATTTTATTGTAAGCAT TTTAAATCTGTGTCTTATTTATTGTCGTTCATATTCATTGTAACACCTTC TCTAATTCTGTTTCAAGGGGAATTTGACATGCAGTAAATCTGGAAGTATT TCGAATAAGAGGAAATCTCTCTAATCCGATAAATAAAGGTTGATATCGAA TTATAAGAGTCGAGTAAGAATAATTAGAGCGAAACTCGATTGGCTTAAAT TTTAGCGAAGATATCGATTTTTTTCTCAGAATCGATctccaaaaaatcga aaattcgaAGCTCATCTCCCAAAGACCTTTTTACACGCTTGAACCAATaa gagattttcattttcatcgaaATCAGGAGTTTACCGAATAATAGAATGTA GAATTCGAGTCGGGGGCTGCATTTGAAATTTCCGAATTAtctaaacgaaa aaagaagtTGGTTTAAgactaaaaaaactttgaatttatTATGTATTTTT TAACGTCTTCCTCGTGTGATGATAAGGACAGTATATATTTCAGGATCAAA CTTTTATACTTCTCTAACAGTCTAGTCCTAggtatttttttggtttttat ttcgACGATAATGTCGTGAACTTGAGATCATATTACCATCCAACGAGACA CCGTGAAGCCGCACATAAAACTTAAAGCTGTCATTTATGGAGAATTTAct ctttataataaaaaaaaactttgtcaaAATATTATATCTCTTTATTCTAA TATGACATTGTCAATGTTTACCTTTCTGAcgtgatttttatgaaaagaga tttttgaaggACGTATTGTTAAAGTAGctttgtgtttttgagtctCGCTT CGCTTGGAAACGTGGAAAAACTTCGTGAACAGGAAGTACTGTAAAATTGT ATGAAAGTTTATTTTGAGAtgatttggtttgttttgtgtttttgagtctC GCTTCGCTTGGAAACGTGGAAAGACTTCGTGAACAGGAAGTACTGTAAAA TtgtatgaaagtttttttttttgagatgcTTTGGTTTGTTTTCGTGTGAT TTTTGTTGTATTGGTCTCTCTGTGATGTTGGATATTTTTGTATGTTGATG CTAGAAAGTTTCATAGTTTTGTTGACTTATACTATCCTATATGTGTGATG TATAAGCTgggaaattttgatattttatgcttgtttataaaagatttctg atttttactgaaatattgaaaattttgaattgttgGTTTAAACTTTGaca gaaaaaatttaattcCCAGCCCTCAATTAACTGCAACTGGTATAGTTTTT GTTCCTCTTGAAACTGATCTTAACAGAACAACTCCTCATTCAATTGGTCC AACCCTTCAAACCCTCCAAAACTTCTACAGTTTTTTCCTGTTCCAAAGCC CTTGTCGAACTCTTAAAGTATTTGGTAATCTTCATCGGTGGTTTATCTCT TTACCTCTTTACATACCTAAATACCATCCTGATTAAATGGTGGGCTCGAA TCAAAGAAATAATTAGGTTTTGGAGGTTTTATACCCAATTTAATCTGGTT TGAGCCTCAAACTACATGAAATTTAACAATTTCAGACTGggcattgttct tattttttgacaatttttgagcCTGATGTTCGTtctataatttgttctta tgagCTATGCTGATTAAACCATTGAGTACGAAATTTTGATCTccctaatt tcaaaatattgctatgttATATTAAATATGTTTCTATGGTATAAGCGATG TGCCTTAAGTAAATATTCAGCGGAAACTAACACTGTTAATATCAAATTGT TTAAATTTGAAATGCAGTTAAATCAACTCTAATATTTGCTTTCGATGCTT ACTTTCAAAACATGGACCTTCGTGTTTTTGATTGGGTGCTAAAATGGCCT TAAGTTATTTAGTTAACAGCTTTAAAGTGCAGAGTTCATCATAGCAACGC CACGAGAGAATTGAGTTCGGGCTTAACAGGCCCGAATGACTTCTAATTTG TCTTCTCTTGTGATTTAATCGATGACTTCAGAAATTTGACACCATTCGAT GTTGGTCTCCTCAGTTAAAGGCCTTACAAAAACTCGAAACTTTCTTTAAG GAAAAAGTCTTGGTTcgaattgggccattccattttatatccatacaggg gggtgaacgaacatttccagggggtaatcggagaagaatttccagggggt atttgCTCATTTTCCCAGTAGGTAAaaggttattctaaaatttccagggg gtaatagACTCATTTTTGTTCGTCCACCCTtacttttaaggtatgaaaat aattttacaagacttcttttgcaaattttgccattttccagggggtatca ccatatttctaaaaatctttgtttgccttaaaaaggttcgtccacacccc tgtatggaaatttaatggaacaccCCATTACTGTATAATCAACTGTTTGT TTCACCAATAGTATGCCTTTCCCATTCTCGTTTCGTACATTTAAGAAGGG ACTGAATGTTTCAATTTCGATCTAGAGATgctcttctttttcaaaatcaa tttcattttgacattttcctttCTAATTTAATCATCAGAAAGTTTATCCT TTTTTATTGGTTATATGTAATGAACTCACATAATTAGATGGTAATTACTT CCTTTTTTATCTGTGGTCGTGCTTTTCTAtgatggatttttttcattctc CTCTGCGCTTCTTGAATTTAATAAGATCCGAGGAAGCCCACTTTGAGAGC GGGCGGCGGCCAGAAAGACAATATGGAACCGAATTTTTCTACGGTTTATt ttagaatatttcaggattttGATCGATCGGTATATCATATCAAATAAACA GTACTATTTATTAATTGCGACTTTCTGATGGAtgttcctataaaaataat taggTATTATGTTTGCTCATTACGGATCTATTAATGACTTTCATTTCCAA TTTCCTTTTTATTGATGAGTTTTGATCTATTTGTATAACAGATGACAGAC ACTTATACCAAAAGTTGACAAAACTGAAAACGACACAGTAACGAAAACGA AAGAAAGACGAATACTACTGTATAGACGTGACGATTTTTCACGATGAATT TGACATGGATGCTTACACTACAGTCCGTTATTTTCTCCACCATCATCTTA CTGGAGACGAGTGGTGAATATTTCTCGTCGAGCGGACATATGCGTTATTT ATTTGATATAGAGAAACAACTGGCATCTCGTCTAAGAACCACCATTGAGC GGGAGGAGCGCCGAATAGCAGAGctgaagaaattttataataAGATTGAA CATattgagaagaaagaagatgaaAGGAATTATATCGGACATCCGAATAA CGCGTTCAAAATCTTGAGAAGACTGCATCGTGATTGGCCTAAAGTTCAGA AAGTAGCTGAACGGAACCACGAGGGTAcagttttacactttttttctaCA TATTCGCCTTAAAGATTTCCCTGTCTGTTTTTTTTATCGAGATTTTCTAA TCAGTTTGAATTTCCAGGACTTTTAAAGCCTTATTGCAATACATGCTTag cgttctacatctgcaatttgagctttactaagctcatttgacgGCAACCA AACGAGTGAAGACGTAGAGTTAGAGGGTCTATCACCATAGTAGTGTTAAG GCcagggcaaaccgatccaacatttcatgcaacatgccttttttctgatg ttggatAAAATGTCGGACCGGTTTgcgtcaattcaaatttttggaaaaaa tgaaaattcaaaaaaagaagaaaaaaatcgtgttggACGGTGTTGGATAA AGTTTGATCgtcatcaaacatttcatccaacattggaaaatcatgttgga tgaaatgttggactggtttgcTCTGGCCTTTAGTGCACATCCAGACAGGG TGCTAGAAAAATAtagtgatagactctctaccttcacctCATTGCAATGT TGCAAACGACACTGAACTAACAGAGACATCGACTTTCCCTTTCTCCATCA TAATCTCTTCATCACTTGAAACAACTGTTAAGGGAGGTCCATAAAGTCAG CATGAAACCTTCATCTGTGACCTTTACCTTGGTATGAGACTTGTCAAACC TTCAGTCAAATTAAGTTTCTCAAGATTAGATGGGCTTTCATTTATAAGAA AGgagtaagattttttttttgctagacTCATGGTTGGGTCTCTACAATTA CATTATTCTTTCCGATTCAGAGGTTTGCCTATCTATCTCATTTAAGACCT CTTTCTCGATTGAATAGAGTAGGTTAACTTGGAATCCTGCCTGTGGAGTC GCTTTTTCTTCCAGAATTTTCAGAGTTCTATGCACAATATGGCAATCTAC TACCATCCGCCGATGATGTGGACGGTGCCCGCGCGGCCTTGTTGCGGCTT CAGGAGACGTTCGCATTGTCTGCAAGTCAAATATTGAATGGAATTGTCCC AGCTTCGAACGGGTTCACCAAACTATGTAagatatcaattttcttttgca CTTCTTGCAGTTTATACAATTTATGctttttgactggcttcagTGTTCTT ATTTAGACAAGGCAAGAACCgtggtgcagtggtagagcatacGGCTACGG TTCGGAAGGTCGTGGGTTCTACTCCCAGCCGAGTCATATCAAAatagtac ttgatgcctctctgcttNTTCATCGGTCTAGAAATCGGTCTAGGCTGACT ATATGAAAAATTGTCTGATCAGAAGTAAAACAAAACCTGAAATCAAAGTC GTTAATATCTTTCTTTAGCGGCATCAGACGCGTACGATATTGGCCGCATG GCGTACACTGATAAAAGATATGATGTGACGATAGGTTGGATGAAAGAAGC GTTAAAAATAGTTGATACAAGTAACCATGGAGATGGTTTACCAAGCAAAG TAAATATTCTGGACCATTTGGCATGGTCAGAGTATAAGGTGGGTATTATT GATTTTTAGGCGATTTGTTAAAACCCTTTTTAAATCCCTAGACTAAGTTA TGTTCGCCATCTTTGTTAAGAGTTTTTTAAATTCCTTCACCCTGCATTAC ATACATGATGTTAGTCAATTTTAAAAATACAGTCCTAATGTTCTAAGTGA TATATCGATCAATATAAATCGAACACACATAGGCAGGGAACCCTAAACAG ACGATGCAAATTTTTCTAAGCTTTAGAAATTTCGAGTtagagaggttcga gttatagagattaaattctgtatttcaaaagtttttagaatctaaAGCTT GAAAATACTCTTTACAGATCAATCGAATGAGTGACGCGCTAAACCATACC AACCAATTATTGAAACTTGGTAAGATATTGAATTTACTGTTTTCACTCAA TCTTCGTTTCATTTACTATACCCCTTACATTCGACTCTACATGGGCGTTG ATTGGGCGttgatttcatttgaaaaaatctgtCATTCAATAGATTCCTAA AAATTTGGTCCTTCATTAAGGTTATACATATAGAATGCCTTGACATAACA TCAGTATCGAACGTTATGACAGGCACGACGGCAGCTTTTTATATCTTGTA cagcgaatgaggaaatttcagcgattttttagcgattttagcgacgaaga ggaaaatctcggtttttttttaaatttgttacgCTAGccgccgtacctgc cgtacccgttgcATCGTGCCTGTATGAGCGTTGGACGGTCATTGAAGCAA TGCCCAAGCAATGTTATGTACATGTTGTCCTAGTTGTAGCCTGTGGTTTC CTTCTTCACCTATAGACCCTGAGAACGATCGTATCCAACGTAACAAAGAA GCCTTTGAAAATTACCTCCTCGAGGGCGTGGAGGCGGAGGGCGAGAAAAA TCTTGAAGAAAGACTCGCACCTCATGAGTTTCCTCACTTTTATTACACCC CTGATGAAAACGACTTTGAGCGGTATCACATTGAACGCAAATTGTGGCAA AAATTATGTCGTGGTGAAACCAAACCTGTGG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064498TCONS_00064498Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064498-proteinTCONS_00064498-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_418supercontigscaffold_418:233720..240450 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
21.58 20.13 15.62 14.02 48.12 37.22 50.95 50.07 20.4 19.17 14.85 10.46 11.98 8.93 21.62 16.94 58.04 61.22 7.54 12.54 32.6 35.37 29.78 33.2 46.93 44.8 10.38 8.1 46.94 43.25