TCONS_00064498-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00064498-protein
Unique Name	TCONS_00064498-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	310

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00064498-protein ID=TCONS_00064498-protein|Name=TCONS_00064498-protein|organism=Clytia hemisphaerica|type=polypeptide|length=310bp
MNLTWMLTLQSVIFSTIILLETSGEYFSSSGHMRYLFDIEKQLASRLRTT
IEREERRIAELKKFYNKIEHIEKKEDERNYIGHPNNAFKILRRLHRDWPK
VQKVAERNHEEFSEFYAQYGNLLPSADDVDGARAALLRLQETFALSASQI
LNGIVPASNGFTKLSASDAYDIGRMAYTDKRYDVTIGWMKEALKIVDTSN
HGDGLPSKVNILDHLAWSEYKINRMSDALNHTNQLLKLDPENDRIQRNKE
AFENYLLEGVEAEGEKNLEERLAPHEFPHFYYTPDENDFERYHIERKLWQ
KLCRGETKPV

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_040451	XLOC_040451	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00064498	TCONS_00064498	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013547	Pro_4_hyd_alph_N
IPR011990	TPR-like_helical_dom

Vocabulary: **Molecular Function**
Term	Definition
GO:0004656	procollagen-proline 4-dioxygenase activity
GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
GO:0005515	protein binding

Vocabulary: **Biological Process**
Term	Definition
GO:0055114	oxidation-reduction process

Vocabulary: **Cellular Component**
Term	Definition
GO:0005783	endoplasmic reticulum

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055114	oxidation-reduction process
cellular_component	GO:0005783	endoplasmic reticulum
molecular_function	GO:0016702	oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen
molecular_function	GO:0004656	procollagen-proline 4-dioxygenase activity
molecular_function	GO:0005515	protein binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 44..71
IPR013547	Prolyl 4-hydroxylase alpha-subunit, N-terminal	PFAM	PF08336	P4Ha_N	coord: 29..155 e-value: 2.6E-30 score: 105.1
IPR011990	Tetratricopeptide-like helical domain	GENE3D	1.25.40.10		coord: 48..257 e-value: 1.0E-11 score: 44.3
IPR011990	Tetratricopeptide-like helical domain	SUPERFAMILY	48452	TPR-like	coord: 164..250

Blast

[Close]

BLAST of TCONS_00064498-protein vs. Swiss-Prot (Human)
Match: P4HA2 (Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapiens GN=P4HA2 PE=1 SV=1)

HSP 1 Score: 149.058 bits (375), Expect = 6.000e-41
Identity = 99/308 (32.14%), Postives = 158/308 (51.30%), Query Frame = 0

Query:    5 WMLTLQSVIFSTIILLETSGEYFSSSGHMRYLFDIEKQLASRLRTTIEREERRIAELKKFYNKIEHIEKKE--DERNYIGHPNNAFKILRRLHRDWPKVQK-VAERNHEEFSEFYAQYGNLLPSADDVDGARAALLRLQETFALSASQILNGIVPASNGFTKLSASDAYDIGRMAYTDKRYDVTIGWMKEALKIVDTSNHGDGLPSKVNILDHLAWSEYKINRMSDALNHTNQLLKLDPENDRIQRNKEAFENYLLEGVEAEGEKNLEERLAPHEFPHFYYTPDENDFER---YHIERKLWQKLCRGE 306
            W+  L    F  +  ++   E+F+S GHM  L   EK+L   L+  I  EE +++++K + NK+E +  K   D   Y+ HP NA+K+++RL+ DWP ++  V + +   F    +      P+ +D  GA  AL+RLQ+T+ L    I  G +P +     LS  D + +GR AY +  Y  T+ WM++ LK +D     +   +K  +LD+L+++ +++  +  AL  T +LL LDP ++R   N   FE  L E  E       E  LA         TP E  +ER   Y  ER +++ LCRGE
Sbjct:    4 WVSALLMAWFGVLSCVQ--AEFFTSIGHMTDLIYAEKELVQSLKEYILVEEAKLSKIKSWANKMEALTSKSAADAEGYLAHPVNAYKLVKRLNTDWPALEDLVLQDSAAGFIANLSVQRQFFPTDEDEIGAAKALMRLQDTYRLDPGTISRGELPGTKYQAMLSVDDCFGMGRSAYNEGDYYHTVLWMEQVLKQLDAGE--EATTTKSQVLDYLSYAVFQLGDLHRALELTRRLLSLDPSHERAGGNLRYFEQLLEEEREKTLTNQTEAELA---------TP-EGIYERPVDYLPERDVYESLCRGE 297

The following BLAST results are available for this feature:

BLAST of TCONS_00064498-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00064498-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
P4HA2	6.000e-41	32.14	Prolyl 4-hydroxylase subunit alpha-2 OS=Homo sapie...	[more]

You are here

TCONS_00064498-protein (polypeptide) - C. hemisphaerica