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Sequence
The following sequences are available for this feature:
gene from alignment at scaffold_412:104378..113834- Legend: gene Hold the cursor over a type above to highlight its positions in the sequence below. >XLOC_040368 ID=XLOC_040368|Name=XLOC_040368|organism=Clytia hemisphaerica|type=gene|length=9457bp|location=Sequence derived from alignment at scaffold_412:104378..113834- (Clytia hemisphaerica)
TGCAATTCCGAATTTGGAAAATCTGGTGAGCAAGTAGCCTGGAAATCGGG
GTTAAGGTATCCTAATTTGCACTTGTTCCTGACTGCCTGCGGAGCCCAAG
GCGCCGAGTATGCACCCGGCACAGTGACAAGCCGTTACTAGCGACCATGT
TTATGATTTCTTATTTCATATACTGATGGTGATTCGCTAAAATGCTCAGA
GCGCGACGGCCCATTTTCCCTTTTCTATCTTTCCCCTTACCTGTTTATTC
TACTTTCTGACACTTAGTTTCTCATTGCATTTCTGACTGAGTTTTCATAT
CTGTCAATCATTTGTCCATCAATTTCGAACAGTCTAATTTTTGCACCGAG
TGGGGGAATCGAACCACCACCAAAGAAAGACCTTCAGATTCGGAAGCCAG
CGCTCTATCCGTTGAGCCATTGCCAGCCTAGACAAATGTTAAATTTTCTT
TCAGAAAAAAGACTACAATTTGTTTACCTTTATCCTTGCAGCTTCCCAAC
ATCCAAGCTCTCAAACATCACAAGCCAAATGAATTATTTGATTTCCCTTA
GAAATTATGCGATGAAAAATCCGGGGGTCAATAAATGAAGACTTTCTTTT
CCGCACAAGTTATCTTTCCTTATAACGAATTATTACTTTTCAATATAATT
GNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNATTGTATTTTAAGTTTGAAAAAGTCGATTCTACTTAGTTCTTTGT
TTTCATGTCTAACCCCCGTCTCAAAAGAAGTCCCAGAATCCCGAGATTTT
GGCAGTTGGGCGTTCAAAACAAAGGCGTTTTTATTTTCCGCCCACTTACG
AAATTTTCTTTAAAATAGGCATTTAAAATATCAAATTTACAAATAATAGT
ATAAAACCTTATTTTCTACCGTATAGTCCTTCTTCTAAAACAAACAAACA
AAATACACTAGAAAAATAAAGAAATTACAAGTGTTATCAAGCCACCCAAA
ATGAACTTTCATTCGTCGCACGTCATTGGATTGTTATCCGTCACGATCTA
TTGTCAACCATTGTCCAATCCCGTAAGCGATTGAAATGCCGTCAGTAATA
ATCTGAGAAAGAGAACAATAACATTATGACATCACACAAATAAATTACGC
TGGGGAAGTCCGCGAGGACAACACGCGGTCTTAACTTTTTTTCCCTCGTA
AGTTTGGGGGGAAAACGAAAGTACTCTATATGTTACGTATGGGGAAGTGA
AAGAAAGATTTACAAAATAGAAAAGTTTCGTTTTGGGGTAAAGAATCAGT
ATTGTGAATTTAAGCGAGTTTCTATTTTGCAATTTTTCTACAGAGCCAAN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTCGATTGCCTC
TAAGGATAAGTTCCGTAGGTATGAGGCTATCGAGACAAAATGTGACGAAT
TTGCGCAGAAACAAAATTTAACATTTGTCTAGGCTTATTGCCGCACACAA
CAAAATCACGCAATTCATAACATATTATACCAAACTGGCAAAAGACGGGG
TTAATGTTATTATAATATTGGTAAAAGTACCCCTTCTTTAAACCTGGCTG
AAATTTGAGCCGTTAGAGTCATATCACCAGTGCACGAACGGCCCCAGTGC
ACGAACGAGCATCTTTGAACTTGAAAAAAACAACCAAAAACAAACTTCTA
TAGAACTTCCTTTGTGCAGCAGAATCCTCAAACCATTCCTTGCAATCTCT
CCAAAAATCAAAATAAACGGAGCACTAGAACAACACCAAACCGATTTTGA
ACGAGGCCAAGTAAAAAAATCACGAAATTTGGGATTTTTGTAAATATGGC
TGATCGCGAGAGAAAATGTTTTTTATAAGAAAATTTGCGCAAGAAGAGTT
CTGAAAATGGCTTTTTTCTTTTAAAAACCTGTTATCTTCCATCACACAAA
ATTTCATTGAAACATGTTAGCTCATTAATTCAAAATCAATAGAAACATAT
CACCAGTAGTTGATATAAAAAAGGTTCCAGTCCGCGAACGATCCGAACAC
CATATCCAAAATGAAGACATTGCAACGTCAAAACATTAGAAAGCGCTGGC
GATCTCAATTAAAAAAGAAGACACTACATTGCCGCGCTTTTCGATGAGCA
AAACTTGAAAAAGAAAACAAAAAAATGGACGACAAGAAANNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCGC
GTGGTTTTGAAAAGTTCAAATACCCCTGTATCATCTCGGAAGAGAGTTAA
AGTATTACCTGCGAGCGGAGCTCTAATTTTTTCTTTCAAAAGATCATTCG
CGCACTGGTTCCTCGTTCGCGGACTGGGTCCGAATAGCACTCGCTTTAAC
GACTTATTATTCCAAGAAGAATGCCTTCAAATAAAGTGACAACAAACTGA
AAGAAGGACTTCAAGCTTGTTTACGAGATGGTCAAAAAGGATTTATGTAA
AAACCAAAAGTAAGTCAGAAAAGAGAAAAATAAGTTTGCCGTTCGTGCAC
TGGGTACCCCCCTCTACTAGCAACCCTGCCAGTCAGGAACAAGTGCAAAT
TAGGATACCTGTCGGCAATCTCTCCTATTTAGGAGAGTTGTATCCTAATT
TGGAGATTTAGGTATCCTAAATAGGACAGCATATACTTTGACCTGAATTT
TTGAGGTTACTGCTTCGATCCGCGTTTGGAAAACTATGATGCAAACCTTT
TCTTCATCGAGATTTGCACCACTGAGTAAAATTTCAAGTAATTTCTCTGG
CGGGTTCCTCGAAAATTAAAATCCTTAATAATCTGCTGTTCAGAGAGGCT
AAAGTTTTGCGAACACGAGCTAAAGATTTGTTTTTCTTTTTACGGAACGG
CCAGCTACGGTCCGAATTTCAAAATGGTAGCCGTATAGAAGGAAGGGGCC
TGGTGATTTTCGCGCGAAAAAAGCTTTCGCGTATGCTAGTTAGCACATTT
TGAGTGGTTTTGGGCTATAGTTTTGCATTCCGCCAGCCAAACTCGATGAA
ATTCAGTAGACAATTTCATTTGCTTATTATTTACATCTTGGAAGTAGTAA
GATGTCTCTGGTTGGTGACAAATACAGGTTTTTTGGTTTTTAGTATCCTA
ATTAGGATGTTGATTGCTATTTTGGATACTTTTTTGTATCCAATTTAAGA
TACTCTCCTAAGTAGGAGAGATTGCCGAAGGTCACCTAATTTGCACTTGT
TCCTGACTGCCTGCGGGGCCGTAGGCGCCGAGTATGCACCCGGCACAGTG
ACAAGCCGTTACTAGCGACCCTGACCCTACCTCCCAATACCCCCTGAATC
ACGGAATGACAAATAGGAAAAATTATCGGGGAAAAAATTTGCTCGTCGCG
CTCTGAGCACTCAGGGAAATCTCTTTTTTTAAAGAGGCAGCCATGTTAAA
TAATTATGTGCTCCAGCATAAAAACAATGATACAGCCAGACGTAATTAAT
CGAACAGTTCGATTACCGAACTAATCGTACTTTGTCGAACTTAATTGAAC
GACAAAAGTCGCTAAAATTGTGAGTATTCGATTTAGTTCGACAAAACATA
TTAAGTTCGACAAAGTTCAAGAACGATAAATGTTTGACAAATTCGACAAA
AAGCTCTGTTCGAAAAAGTTCGACAACAAAAAATGACCTCCTTTGGGTAC
CATCGTGGACGGCCCCTGGGGGTCCCGGCCAAGGTCCCGAGGGGTTCGAT
TGGAGCCCACTGGTCAGGGGATGTGAGAGTACACGTCTGCACTGTTGGGG
GTCCTTCAAAGTTCTTCAAAGTGTTGTCAAAAGCCGGCAAAAATTGCGAA
AAATGACCTCCTTTGGGTACCAGCCACTGTGGGACCAATCGAGGCCTCTA
CAGCCCCCCACAGCCCTTCGAACCGCTTCGGATACCCTTTGCCTTGCTTT
CCCTCAAAGCCAGCACCCTTCATCAGTCATCCGAAGCCTTTAAAAGGCTT
GGAGAGCCTTGAAAATTGGAAGAAATGACCTCCTTTGGGTACCACCGTGG
ACGACCCCTGGGGGTCCCGGCCGGGGGGTTCCTGGTTGATCGGTGCCCAC
TGGTCAGGGGGGATGCGAGGGTACACGCCTGCACCAGCGGGTTCCTCAAA
GTGTTGTCAAAGGCCGGCATAAAGTGCGATCGAATTACGCGCAAGTGGAG
CGGCCTTCAGTTGCTCGGGTTTTCTCAAATTTTTGTTCGATTAAACTTGA
CAAAGTTCGATCAATTAGTTTGATTAAGTTTGATTAATGTAATCAAACTA
ATCGAACTATCGAAGTCTCTTTAAAAAAAGTTTGATTAAGTTTGATTTCA
GTAATCAAACTTAATCGAACTTTGTATTTTGAGAAATTTGTGAGTATTCG
ATTAAAGTTCGACAACCGAAATTAGTCGAACATTAATCGACCAACAAAGT
TCGATTAAGTTTGACAAAGTTCGATTAAAAATACCGTTCGATTGGTTCGA
TTAATTACGTCAGGATACAGCCATGCATAATTTTTAAAATATGCATGATA
CAGTAATAGACCTTTTGGCCTTTCCATCCGCCATATTGAATAGTATGCAA
AAATAATGGTGGCTGAATTGCCGTGGTGAAATTCCCTTAGAAAGTATGCA
AAACATATGCAAAAAGAAAGTATTAATATAAAACTTACATGCATAATTGG
CATTATATTGAAGTTTAATCTTTGAGAAAAAAGATTAAATTTGCTTCTCT
TGAAAACTAAAAGTAATTATATTCGCTCATCTCTTAGAACAAGCACTTCA
AAAATCAATAACATTAGACAAATTCAAACTGAAAAATCATCAGCGAAGGT
AAAAAATAATCCTTATTCGGCTGGCGGTAAATTATTCTCCTGGGAATAGA
GCCGCCAAATGATCAATCAAAACATTGATAATGTGTGACGTCATAATTAC
TGCTTTTCAGTTTGCGTGTTTTGAAAGTTTGATGTGTGTACTCCGTCTTC
GTGGAATTTCTTAATGGCATGAAAAAAGAATATGTTATGTCTGTAAGAAC
AAATTTCTAAGCAAAAAAAGAACCACTCTGACAAAACCCCAAAAGAGGCA
GGGTCCATAAGCCTTATAATACCCCAAACACACCACACAAACCAAGAGGA
CCCTGCCGACGCACCAGACTTAACAAACACCAGACATGCGAAAGTCCGGT
GTAAAATGGGAATTTTTTTACCACCGGACAATCTCTACACCAAACTTAAG
GAAGTCGGATGTCCGGTGTCGAAGAAGGATATTTTTTCCACCGGACAATC
AAAACACCGGACATGACCAGTCCGGTCCGTCCGGTGTTTCTTAATCTTTT
GTTTCATAAATGTCTGGCGTCCAAAATTCCCTGTATGCAACACCGGACTG
ACACCGGACTTATACCGGTGTAGCGGAAGGATATTTTTTGCCACCGGACA
GTCCGGTGCGTTGGCAGGGTCCTAAACCAAGGTGGCACATTACCTGCTGC
AATCCGCACAACGCTCTTTCTTTCCTTCTAGTTCTTCTAATGTAAATGGT
TCCTTAAAAAAATTGAACAATATTCGTCAAACGTTCAAACATTTTTATTC
GAATTGTCTTTTGAAATCAAACGTAAACAAAAGCAAAAATGATGGCTTGA
TGGCTTTATAAAGGGGGGAGGACACTATGGTATGCTATTCAAGCTGCTCA
TTTCATTTTCTTACTCTCTTGCTATTTTTCCTATTTTTATTTGACTCGCG
TCATCACCAAGTAGGTCCATTCAGCATGTTACGTGTTGTATTTTATTTTC
AGAAAAATCATCAAAAATGGAGAAAGAATTCAATGAGATTGTTGTACAAG
CAATCACTTGTAATCAATCACAAATTGAATTGTTAATCAGCATTGTTAGG
GAGAAATCTTCAGAAAAAGAACTTGTATCCATATTTAAAGTGTTGAAAGG
AAAGTTGCACAGCCTGACAAAACAGCATCGAGTACTTGTCATGTGCTTAT
TGACCTGCAATTGGAATATCACTGATCAACTTATGGAACTTTTTACTGAT
TTTGTGTTAGAACTGGTGTCAGTGAACTCTTTGTTTTTAAAAGATAGTAT
TCGATGCTTGGTGAAAGAGCTCTCCTTGAAATCTGAAGTAGCTGATGAAA
AGCTGGTTACTTTACAAATGAAACTTGACCGCATTCATCAAATTGTTGAA
TCTATTGTCCAGACTGCTCCTTTGTCGGTCAAATTTGTTGGAGAAGCAGT
TGAATCGTTTTTCCCCTTCATTGGTAAAAGTTTGTTTATTCTGAAAATAT
ACATTTTGAATATTATGAAAGTTACAACATATATCAAGGGTTTGAGACAT
CAGATCTTGGCAGTGATTGTTGATAAAATGTTATCAATGGACGTCACTAT
CCTGAGGCACGATATCGAGAGAATCATTGATGAACAGGACCACATGCAAT
TTCAGTTAGACGATAGCACGATTGCTACAAATAATGAAAGTTTTTTACAA
ATTGATAAAATGGACAACCTTATGGCACTGGTCATGACTTTTGTTAGAGA
ATGTTGTTATTCCAATGATACAATGCAATGGAAGAAATCCAAAGCTTTAT
TTCAAGAACTGATTAGTATTTTCGAGAAGGTCATTTTGAAAGCACAAGAG
AGCTCGCATGTACAATTTATACTTTTCTACATCTCTGGCTTAGATAAAGT
AAGTATTTTTTTGTCTTCTTAGGTTGGTCTAAGAAGCATAAGCCTTTATT
AACAATAGTTAGGAACAGTAAAATTTGTGCCTGANACTTCTTAGGTTGGT
CTAAGCAGCATAAGCCTTTATTAACAATAGTGAGGGACAGTAAAATTTGT
GCCTGAAGTAAGAAATGTTTGTTTTGAGGTACTGGGGTTTGTGGTACATA
TACCTGTACCATTGCTCTGCAAAAAAAACTGCGACAAGAGTTTCAAATAA
TCTGGAACAATTTCATAATTTACATTGACAGTATTTTCTGAAATTCGAGG
TGTGCTTTCATTTAATTCTCAACTTTTCCACTTTAATTTTTTCAGAACCT
AAGCAATGATTTTGTGGGTGCCTGTTGGATGATGTTTGAAAACCCTTCCA
ATTCGTTGGTCACTCGACAGGGTGCTTGTTCTTACCTCGGAAGTTATTTA
GCACGTGCCAGAATTGTTGATAAAGAGACCATCAGCCACCAAATGAAACA
CATGTCAGAATGGTTGCACAGATATCTCAAGTTACAAGATGGAAGCAACA
TACAAGCAGACTTCCATAAACATGGCGCGTTTTATAGTTTATCACAAACG
TTCTTTTATGTGTTTGTTTATCATCACAAAGCATTCGTGGAGTCAGAGAA
AGGAATAAGTTACTTGAAATCACTAGACTTGCCCAGGATTGTACTTTCTA
AATTGAACCCGTTGAGATTTTGCTTGAAGACGATTGTAGACATGTTTGCA
CGCATCACACGTATGTACGAACTGGTGTTCTGTTACAGTACTATCGAGAA
AAATAATAGACAAAAAATCTTCTCACAACTTGAGCAAAATGATAGGAAGG
CAAAATTTGTAGAGCATTTCTTTCCATTTGACCCGTACATCCTTCCACGA
TCGAGCGTATTCATAAAACCTTTGTACAACGAATGGAACGATTTGAATGA
GATGACGTCAGAAGAGGAACATGAAGAAGAAGAGGTGCTTAGAGATGACA
TGGAAGACATTGATCATATGTTCGCCTCCATCAACCCTCATCTCACCATG
GGAAAACTTTCCACCAGTAGAAAATCTGCTTCACATAGTTTTGACATGGT
GTGTATATCTCCTGGCTTTATGAACTATAATTGACTGGCTCCTAGCAGTT
CTCTGTATGACCTTAAGGGAACTAATCTTCGTGGAATAAATTCTCACAGT
TTGATAGTCTATCGTGAAATGAGTTTCGAGAGATACAGCTTCCATCAAAA
TTTTAAAATTGGCGAAAATTAGAACAAAAACACCAATTCTTTAACCTCCG
CACCGAGAAAGTTTGTTCCCTTAAGGTAGCTAAAATAACCTTGTATTGTT
TCTGTTGAATCAAGGAAATTTAATGAAACAAAATCTCTTTTATATTTTGG
ATTTCTATTTGCCGGTGCCCTCTCATGGGTCATCTTCTTGTTTTGAAAAA
ACAGGATTTATTAGACAGACCCTGGAAAATAATGAGGGTTATTTAAGATA
ATTCAGGGAAAACCTAGAATCGCTGGGAATTCTGAATATCTACAATATCA
GAATTTAAGGTAAAAATATTTGTTGACTTTTGTCTGAACCTTGTGATAAT
CGTTTCAACCAATCATGCACCTATTGCAAGTAAAGTAAAATACAAGTGTC
TTTGATACTCTACCTACATATACCTATTATTTGAAATTTGTAAAATATAT
AAAATATAAGGTGTGTTTGATAAATATATCGTATCATCATCGTGTACATA
ACTCTTCTTCGCCTGTCGACTACCAAATTCCAAATGGTCTTCAGAAATTC
CACATTATTCCATATTTTCATATATTTCATGTATATTTTTATTTTTGCAG
AAGTACTTTTCGAATCAAGCGTTGAAAATAAAAGCTTTTGAAAGTACTCC
CAACATGACTTCAAACTTTCATATTAAAACTTGAAGGGCTTTGATACTCC
ATGGACATTGTTTCAACTTTCACTGTAAGAGGTGGGCCACTTTACATTTT
CTTTTGTAATTCTAATACCTTCTTTTGCATAGAAGCCACTTTATTTTGTA
ACCTTGCCATTTTGTTTTGCAGACGTAAAATCTCTTTCTCTTTTTCACTG
GATGTTTCTTCTTCGATGACACTTTGATGTTGTTGTTGTGGTTTTCTGGT
GGCAGTCGTTTTACTTGTTCGCTCGTTATTGCCAACAGAAGTATTGATGG
AGGGGGTAATCAAACTTCCACTTTTGATGGTGAAATATTGTGAGTGGTAC
TTCTTCCCTTCTTTACGATGACACGAAATGTTCTCCTCTCCTCCAAACGA
TATCGTTCTCGAATCTTCGAACATAACACATGACATGTCTGCACTCTTCT
CAGACAAAAACAAAATCTACCTTGTGCTATCAGGATAGTTCCAGTGCAAC
TTCTCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
The following polypeptide feature(s) derives from this gene:
Position
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| scaffold_412 | supercontig | scaffold_412:104378..113834 - |
Orthologs
The following orthologs are found for this feature:
| Ortholog Name | Description | Organism |
|---|
| RRN3 | RNA polymerase I-specific transcription initiation factor RRN3 isoform 1 | Homo Sapiens |
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