XLOC_040175 (gene) - C. hemisphaerica

Overview
NameXLOC_040175
Unique NameXLOC_040175
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_407:396283..406857-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040175 ID=XLOC_040175|Name=XLOC_040175|organism=Clytia hemisphaerica|type=gene|length=10575bp|location=Sequence derived from alignment at scaffold_407:396283..406857- (Clytia hemisphaerica)
GAAAGGTTCAAAAATGACTTTTACAGTTAACGGTGAGTGGAAAATTCGAA TCTTACTGTAGCGCAACATCTCCATTTCTTTGACTTGACGCCCAGGGGGG GGGTACTAGGGTTGGTGGATAAGGGGTATGTTCGGGTGTGACCTCCGAAA ACCGAAAACCGACCCTTAGAGAGACTGATTTTAGCTGAACTGTCGATCCT TAACTTAGAGAGACTCTTTTGAAAAAATTTCTTCTATTTTTGAAAAAAGT CCTACCCTTAGAGAATTTCTTTTACAATTTTTTCTTTCGAAATCAAAAAA ATTCTTTAAAGAGACTAACTCAAAACTTTCCGATTTTTCCGACCCTTTAA ACATACCCAGCACCCATTTTTGCCTAAGTTGTTGGTATTTTTAACACGTA AAAAAGTTGAATGATAGATATATTTTTTTATTTCATCACCTGTGTATCTA GGTCGATAGAATCGATGAATCAAAGTATTCCGATATCAACAAAAATAAAA TTGATACCTACAAAACTGAATCAAATAGTTTGCAAAATTCAAAATTTCAT CATGTCACAAACCCATCTCAAAATGGCTCCAATGACTTATGCAGAGGTAT GTCTTGNTGGTAATTTCATCATGTCGCAAACCCATCTCAAAATGGCTCCA ATGACCTATGCAGAGGTATGTCTTGGATCTATTGGTGCATTATTGAACTC AATTCAAATCATCTACATTTTGTGCAAGAAGAGGAAAAGCAATGTGGAAA GGTTTTTACTCAGCATCTCAATTGCTGATATCCTGACATGTGCGACATCA TTAATCGCTGTCGTTTTCAGCCTCAAAATCAAGAACAGTCATATCATCAC ATCAAGTATCGATGAAGTCAATTTTTCTCTAGCTGCAATTTCTGGCTTGA ACGTGACAAGCTTAACATTGGATAAATATTTTGCTATATTTCATCCGTTT AAACATCGTGTAGTCGTATCTGGGAAACGCATTACCAAGTTTTTAATACT ACTCTGGATTTTTGGTTTGGCCCTGGGATCGACTGGATTTTCATTATGGT GGGAGAAAGTTTTGGATAGTTTCAATATTTACTTTTTGTATGCTGCTGTA ATACTGGCGTGTGTGACCTGTATTTTCGTTTATGGTTCGATTATGACCAA GATGTGCAGGTGTGGTGCCGTGAAATCCAGAACCAATCCATCTAACCAAC GAAAAAAGTCATTCAGAACGTTAATGATATGTTTTATCACAAGTTTTTTA TTCCTTGGGATTTCAGGACCAATATTATACGATATGAATGGTAATGAAAG CCCAATTATCTTCACATTTCTTGATTGTAATGCTATCGCAAACTCTTTAG CTTATTTCGTATTTCTACTGGTGAACTTTCTATGTAGCTCGAGTACGTCG ACAACGGAAGGCCGCTATAGAGCTGTTTGTTATGCAATTCAATGCAATTC AATAACATTGATAACTGACTAAAAACTGGTCTTTTGGACAAATTCTAAAA GAACCACGTAGGACTGAGCCATTCCACTCAAAATCATCTTTTCAACGACG TAGTACTTTCAGTAATAATTTTCCCATTAAGAGCAATGTATAAAAAAGTG CGGAGTATCACCAATTTTTTAGAAATGGTTTTAAATTCACGGGGCTTGCA CGAAACAACAGCGTCGACTGGGGTTATCAGGGGTCGCTAAATAGAACTTC AAATAAGTCTGATAACTCTTAACTTTGATATGATGTCGGTCCAATCTCTC ATTATGGATTTGGATTTTAGATAATGTTGACGTCATCAAAACCAACATGG CATCAATGTCAAGTCAGTCATGGTTTTGTAATATGACCTCTGCTTTATTT TTGCTTGTACGTACCCATAGAATGAAAACATAACATGTAATTCTTTCAAC AGATCATTTTTATAGAAACTTATGCATGTTGTTATATCAAGGAGTTGAAG ATATTTAAGTCAGAAAGAATATTGAAGAGATTGTTCAAAAAGGTAAAGAA AATTTCAATTCACTTTGGAAATCAAATGTTTCAAGACATTGATCAGTACA AAATTTCTGCTCAAAATTTAACAACGCGAAAGAAAGGAAAAACAGATTTT TACAGGAGAAATTTACCAAAAAGATTGTAACAAAAGAAATATGTTTGGAC GTCGAAAGGAATATTTCACGAAACAGTATAGAAGACGAGCACTTTGCACG ATCATTTTGTATTATGTGACTTTTCTGAGTGCGTTCAGAGATGATGAATT GAGTAAAACGCTTTTTGCAGGTAAGTTTTTCTTTGTTGTTTGTGTTTGAA TTCATAGCTTTCCCCTTCTAGTATATAGCACGATTGAATAATGAACCCTA TTAGGAACTGATTTTGAAAAAGTTTTGCCGTGATTTAATATATATTTGTC TTGTCAGTATCAAAACGCCAGAATTGTTGAATTTATTTTCAATAAGATGC TAAAGTAAAATCAGCCCCATCAGTTCAAAAGATAGCAAAGCATCAAAGCT TTCTTTCATTCTCGAAATCTGGGTTGCTTTTAACGAAGTTAATAAAAAAG AGCTTTATATAGACCATGGGGTCAGATTCTCGACCCCGGCTAAGAAAAAT ATATTTTGATCGAAGTTTTTTTAACAGTGGTACCCGCATCGAGAACGCTA GATCTATTTCACCCACACACAAGTGATGTAGCGCCGCTTGTTGTTAGGCA AAGTTTTAACACTACAATAGCTTCTTTGCGGATATCACTTTCAAAAAAAC TCCGATCAAATATGGCGGATATAACTTGGTCCAGTTTATATAAAGGTCAG TGGTTTTGCCTTATCTACTACTTGTCAATGACAAAGGTGACCCCAGAAAT TAGTCCATGGTTATCTGTCTCTTCATTATTCCTATTCTGTTCAAACTTTC CTAATTCTATAAACTGATGTACTATCAGTATGCCAAACCTACTCAGAAAT AAATGCTCTCTTTTTACGCATTGAAAACTGAGATTAATCTACGTCAACGT GACAAATGGCTTGTTGATTTTTGCGGCAGAGAATCGACACGGGTGCTAAA GTGGCTTGAAAGTTGTTACATTTTTACCAATAAAAAAAAGCTAAGTAAAG TTATTCCACTTTCTCTTGCGAAAGTAACAATTTCTAGTACCCAAAAGTCT GACGGGTTTGCAAGATAGTTTAGTCGTTAGAGCATTCGCCTTGCAATGCA AGGGTTGTGGGTTTGATCCCCGGTTATCGCCAAATAAGCGAATGAGTATA TTAAAAGTTACAGTCATTTTTGTCTCCCATACGACTGTTTCAATAGTTTC CACTTTCGCGGAATTTTCTAGAATTTGAGTCATTTGACGTCAGCAAAATA ACTGTTCAGTCTCCGTTAATAGTATCCAAAGATCAACCCGCCAGAACATG AATCGTGTGCGTGTGCTAGGATATTTTATTCTTGGATTAGCCATTTCAGT TTGGCTTTGCAACAATGTAAATTCCATCCAAATCACGTCAACAGGGTTCA AAATGATCGGAAATGTAAATAAACATTTAAAGATGGTGGTTGTGCAACAA GTGTTGAGCTCGTTCCCAGTCTCAATTCGCTGCTGTGTGAAACTATCGCG ATAAAGGGAAGAATAAAGGAAATAACTACTTGCTAGAAAAAAATTTTTGG GGAAAAAAGCCAGTCATTGACTCTTGCTAAATTCGAGTTTATATTATTCG TCCCTACCAAGGAGAACCCCTCATATTACAAATATATCGAAAATCTAGAC TCCCAGTTCGAGTTCCAGTTAAAAAGAGAATGGGGCCTCAGTCGTGTACG CTGACATGTTCACATGCGAAAAGATTGATTAGATGAGACAAAGGTCAAGG TGCGACGAGGAGCCGCCTTTTTTTCAACACAGCAGAATCTGAAACTTATC ATTATTTAATAAAAGTTCAAATTTCATCTTTCCAAAAACAGTTGATCGAA GGATTCGCTTCACTTGGTTTAAAAATACACTTGTATGACGTCAGAAGTTA CAAAGTTGCGGAGTAATTTGAAGCGATGCCCGAAAATCTCTATCTAGTAT TATATTCGATTTGATGAAAATCTGAAGTACAAATAATATAGGGTTTCATC ATGATACGGTTTTGTAGTGTACACACAGTCTTATATTTCAAATGCAGCAA AAGTCCAAAGTCCAAATAATTTTTTAGGAGGAAGTAGACACTTTTAATCT TTACTATCGAATACATACTGCTGTGTTTGACTGTGAAATCGTACCATTAT CAGTATCCCCACTGACTTAAAGGAATAACAAGAATGGAGATTTGACGAGA TTCTTACTTGATTTTTACGTAAAAAAACTTGAATACCTTCGGTCAGGAAT AAATTTTGATTAATGAATAAACTGATTATGGATTGGCCAACTATGGCAAA ACTTGAGAAACGTCTCACTCTACTATATCATTACCTACCTAGTAAACTAG AGTCTACTCCTGACGAAACTTTACTTTCCGATAATTTTTGATGACGCTGA ATCTAATGAAGTAGACTAGGAACACTTTCGAAAAACAACTAGAATCTACC TAAGTAAAAGCTCAAAATTGTGAACTAGCCACTTACACGCCATTCAGTCT ATAAAAGCATTAAGTGGACCCGGGCTATTAGGCGTTGTCCACGATTTCCC TGAATTTAAAAAATCATACTTTTATGATTCAAATGTAAATTAAAAACTCG TGAAATAATTGTAAGCTTGAATATTTTTCAGAAAGCAACATCCCACGACT TGGCGATTACCGACCATTCGCGCCACATGCTCAAGTCATCAGTCGAAACG AGATCAAAATAAAATGGCTGCCAGCAAGATTAAATCACAACGACCTTGTT ATTGTGTATGAACTTTACAGCAATCAAGATCTTGAATACTTCGGACAAGA TTTGGTCCACGTTGCAAAGCGTCTCCAGCATGGTAGAGAATATAAGTTTC AATTGAGAATCTGCAATGCAATGTTACCGAATGACTGTTCTCAATTCTCT TTCCCAAGATATCAGAAGTTGACAGGTAAATTTTTTGATTGTCCAGGAAT ATTAAACAGTAAAACTTCATTAAAACGTTAAAAAAATTCGACAAAAGTGT TTCCAATACCCCATAAAATACCGATGCTTGACCACCAGGATACAGTATAT AAACACTTAAAACTCTTGGAACTTTGCCAAAGTCAAGCCTCTGTTATAAC CTTACATAATGATTTAAAGGTATTTAAAAGTGTTATTCACGAAAACAAGG CTCGCAAGACAAACAAGGAAAACAAAAACAGTAAACAAAATTAACACAGA ATACTGTAGCATTCAACTTTCAAGCCAAAGTTGAAGCTCGTGAACTGATC AGGCATGTTTGAATATCTTTTGGCGGACTAAAGATAATTTTGAGTATAAA TAGTCCAAGTGTGCTAGCTCCAACATATAAGATAGTAGAGTTTTCAATGG GAGGAAGTTTGGAGGTGTCACTAAAGTTTGGTTGAGATTAATTTGTGATC GAATTGCGATCAACCAATAATGAGCTATTTACCAGAAATCCCCGTAACTG ACTTCAAAGGTAGATATCGATACAGGGGTTAATGCATCTGAAATAGTAGT ATGGATATCAAGCAGGGAAATTCTATTACACGCTTATGTTTCAGTAGCAT AGACAAAGGGGGCACAAAATTTGTGTAGGAGAGCAGATTTTTATGACACT GTAATTATCTATCCATATGAAAATATATATGTGTCATAAAAATCTGCTCT CTTACACAAATGGTCATTGCGCCTATCCCCTTGTCTACGCTACTGTGTTT CAGTGACTCGACTGCGCAATGAGAATGATGGTAAAAGTTTACTCCAATTA TATAATATTCTATTCTCAAAAACATTTTATTCCACAGACATGGAGTTAAT AGAGGAAGGCGAAATGATGAATTATCAGAAGAATCCGATGAAAGAACACT ATATCCTCATATTGCTCCTTTCAATGTTTTTTACAACCGTTCTACTTGTT GGATTGATGGTATTAAAGTAAGACTTTTTTCTTCTCATATATTACCTTTT GCACTCAATAACATCTCTCGAAGATGTGTGAAAATGCTTAAACTTGAAAA AAAACCCGGGGTATCTAGTCACGTGGTACTGGTGCTGGTATGCCACGCTT AAGAGTGCTTTTTTGGGACTTGTCGCAAATATCCTAAAACCTTATTTAGT CACTCAAACGGTTTCAAGAACGATAAAAAAAGGGGGAGGAATCTCAACTT TACCCAAGGTTTGAAATAAAAGGAAGATGTATATGTCCAAGGGTTTTGCA AGGGCATATGCATGTCAGAATTAGTAAGCATAAATCAATTGAACAGGTTA GACATTACGTAAATAATGGTTTGGCTCGAAATGGCTTCAAACAAGTAGAC ACTGACAGTAATGATTTTCGGCTAGTCATTGATAACGAAACCTACATAAA TTGTGTGGGACTCGTGATGTCAGCACTTTCATCAGATATCAACAATCCAA CTACAGTGCACCCGTCATTCGAATGTCCAATGAACGCTCATTAAAACAGC TTATGTTTAATGATGACACTTCGAGAAAACGTGGTCGTCCAATGAAAATG CTCTTGGAGCAAGTCATATCAGATAGAAATTAAACTATTGATCAGCTTTG TAAAAAATCTATTTCAGATAATGTGTGAGATTGCCAAAAGGGATTATACA AGCAAGGTTGTTAGGTATCCTTTGAAGCTATGTGGCCAATCCAATCCTTA TATAAACTGTATAAAACGTTTATTATTATCATATTATTTCAAATTTATAC TTCACCATGTTTTTGTTAAATTCCCTCCAGCAACGGTGTAGGCTATTTCG AAACGACTTGTTTGCTGCACAAGAACAACTTGTTGGTTTTTAGTTAGATT GACGTAAATCCTTTTCGTTGAACCCGACTCTTGAAAATTATTTTGGGGGT CAGGAATTTTACCTATAATATCAGTTTCATGGCTATAAATATTTTTGCCA GGTAGGGCTAATCAAGGTTTGAAGGCCCCTTCTCAAAAGGATTCAAAATT TTATCTTTTTTTGAACACATGCACATATAGTGGTTGCACCCAAAGAAAGA ATGCTACCGAACCGAACCGAATATTACACCCTACAATAAATCTACTATTA GAACGCCATGACGTAGACATTAAACCATTAAACACAATTAAACCCGTTAA CCAACAAAAACTATTCCGTTCTTCCATAGGTATCTCAGTTACTCATTTGA TGGAATTACTTTCGAACTATCGACCAATCAAATTCCCGCTCGCAAAGATC ATCCATACATCTTTCTTACCAATAAAAACACAAAACAAACAAACTCGATA CCGATCATTCGAAACCAACCGAAAAGTTCCAAAACGACCGTCAATGTAAA GAACAATCTACACGACGACAAAGAAGAGCAAATATCAGTAGCTGCGAGCA AAAAAAGTGCAGAATTAGTAGAAGAGGGTCGTAGTGCGAAATCAACCTCA CCGAATGTCGAGAACGTGAGCACAAAAGATCACAAAGCATCCTTTGAATC AAATAATGGCAAAGGTTGGATAACAGCATCTCCTAAACATCACACGAGAA AACACCAACGAAAGAGAAATCGAACTTTAAGTTCAGGTGATAATCAAGGA AGCAAAACCGCACCTACTATTTGCGACAGTCCTCTTAACGCTGGACTAGA CAAACATCAATTGTCACACAGTAGATCCAATTCGTTCTCTGGAGGAACTG AAGATACCAACTTTCCGAAAACGGAAAAAAACTTTGTTTCAGATTCTATT GTTGTGGTAGTTGACAATAGCAACGTCTTTATCGGCGCACGTGAAACAGT TTGTATCGCACATGCGCAGCAAATAAAACCAAAACATGTTAAATTGCGTC TTCAACAATTGCTGAGTGTAGCAGAGAGCGGACGAAAGGTGACACGCGGT TTCACGGCGGGCTCGTCACCACCGGCTTCTGAACAAGTATGGGATGTGTA CAGGTAAGTTGTTACAGTCTATCCACGAAGTGACGCGTTCTTCTTACCAT AGAACGAGGAAACCAGTTACGAGCAGTGGAACCTCTAATTAGCGGACACC ATCGGGGAAAGGGGTTAGTGTCCGCTAATTAGAAGTGTCCGCCTTTTAGA AACTTTTGATCTCGGAGCTCCAATTTTAGAATTAGGCCATCCCAGGGTGT CGAAAATACAAAATTAAGGTCTAAAGTAATTATCTGCAGACACTAGGCCA TAGAAGAACAAGAGAAAGGTTATTAGAACGCAACAATTTTTTAATCGTTG AATGGGTCAAGGGAAAACTGGAAATTTGTAGAAATAATTTGAATAATAAG ACTAATAAGTGCTTGAAATAAAAATATCTAAAAAATTTTTTTTCGATTTT GGACGTTTGTGACTCGTTTGATATTCAATGTCCGCTAATTGGAGAGCTAA AATAGGGGTTTTTGCCATTTCATGCGAAAAAATTTGTCCGCTAATCAGAG GGTCCGCTAATTGAGTGTCCACCTTTTAGAAACTTTTTTATGAGGATTTG ACTAGGAAACGGCCGGGGAAAATGAAATTGTCCGCTAATCAGAGGTGTCC GCCTTTTAGAGTGTCCGTTAATTAGAAGTTTTACTGTATAGTTGTCAGGC GAGAGCTCAAGAAAATGCACGCTCAGCGGGAACAGACTTTGATTTTGACT CTGTTGGTTCTGAATTTAAGCTTTAAATCTAATCTCGATTTGGTCAATTT GACCGGAGAAATTTCAGTACGGTCTCACAGGAAAATATTTAACGTATATG AAACCCCGAACCAAATCTCCCTCTAGGACGATACATAGCATAACATCCAC AAAGCGCTAGATGAACTAAGCAAAGTTTAATGCCGGGTACGAGCAGTGTA CTTGAAAGGTTAAGAAATAAAAGGGCATACCTGTATCCAATCCAATTTTG TGACTGAAATAATCTTCGTTTTTATTTCTTTAGACGTCATGGTTACTTAG TCGATCTGGAAGAGAGACGAGGGAAAGATGAACAAAGAGTGGACGAGCAA TTGCACCTGGCCATTTACAAGGTGGAAATCACATCAGTGAACTAAAGTTG ACGCTCTCTAATTCGATCTTCAAGGGGAATTGGATTTTCATCGAATAGGG GAGCGCCGTTTATGAGAGTTTCTTGGTGAAGGGGACTTTATATTTCATCA AATGAGGAAGCCTATCGAATGTCGAATTAGAGAGGGTCAACTGTACATAC AAACTGTAGGACAGTCGTTATTTTACTTTCACAAATTGGGAAAATAAGTC AAAACGGGTGTATTGATTAAAATCAGACGAAAACGCAAGATGACCAGTAG CGTAGACAAAAGGGGCGAAAAATTTGTGTAGGAGAGCAGTTTTTTATGAC ACTTTTATTATCCATTCCTAACATAAAACGATAATTAATTTGTCATAAAA ACCTGCTCTCCCACACAAATCTTTCGCCCCTCTTGTCTACGCTACTGAGT GACCATTAAACTACAGCGTCATTCATAGGCGACTATTTCTCAATAGTCTA GTTCGGTACAACGCTTATTGCCTGTAGTTTGCTGGGCTAAAACTAGCCTG TGATTTGCTGTGCTAAAACTACTTGTCATCTACAAACTGCTCTGCTCTTG GTCCTTTTGAAAAACCTTTGAAATAATATGCAGAACTGAAAAGAAACAAA TAATTGAATTTTTTGAGTAACTTCTTCTTTCTCAGGCACTTGTTGATCTA AAACCACAGACACTTGTACTCGTCACGGGAGACGGACACAAAGGAAAATC ACGCGGCGACACAAGTTTTATCAATTGTGCAGTGAAAGCTGTACAACTAG GATGGAACGTTGAAGTTTTGTCGTGGAAACACAGCCTTAGTACGGAATGG ATGAAGGTTGCATCAAAACATTTAAATAAGTTCAAAATCATTAATCTAGA CGAGTAAGTTATTTTCTTGAAGTCATGAAAATCAACCTGGTAAACAGGTT TTAAAGAATGTGCCTGATACCTGCTCTAAGGTACTGAATGACATGTTTTC GGACCGAGATTCAAACTTGGAAGTAAGAGCGGGTGGTAAAGGGGAATCAA GGTTGCCTGGATGATCCTTAGATCACTTTTTTTCCGCCCTTTCCCCTTTT CACTCCTATGAAATCAGTTAAAAAATATTGAAATAGCGAAAAGAATCTAG GCTTAATATTTTTTTCAAAGTTTTTCTTATTGAGGGAGTAGTAAAATTCA TTTCTTAATTATGCCTCCTCCTCCTCGCCTATCTATGTAAGATAGACGTA ATCGACTTGGATTTACTTATACATCTCATCCGATTCTTTCTAGCTACATT GAAGTGTTGACACAAATCGAACGTCGTCATTCCAAAAAGAGGATAGATAT TCGCACAGGCTAGTTCCTATGATGAGCTGTCTGCAGTAGCCCTCTCTCGT GTAAATAGTGTATATAGATATAATATAAGGCATGGTTCATTTTTATTGGG GCTGTTATTTAATTGGTTTCTTTGAAATAAATATTCTTAAACGATATCTC GAAGTCAGAAAATCTTCAGTATCTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064087TCONS_00064087Clytia hemisphaericatranscript
TCONS_00064086TCONS_00064086Clytia hemisphaericatranscript
TCONS_00064085TCONS_00064085Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064087-proteinTCONS_00064087-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:396283..406857 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0 0.02 0 0.03 0.32 0.29 2.56 3.23 3.02 3.58 3.44 3.82 4.6 4.69 8.83 14.95 6.05 4.11 3.81 4.02 2.5 2.68 1.62 1.21 5.3 3.48 2.88 1.04 29.34 24.18