XLOC_040162 (gene) - C. hemisphaerica

Overview
NameXLOC_040162
Unique NameXLOC_040162
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_407:97813..104269-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040162 ID=XLOC_040162|Name=XLOC_040162|organism=Clytia hemisphaerica|type=gene|length=6457bp|location=Sequence derived from alignment at scaffold_407:97813..104269- (Clytia hemisphaerica)
TGGAATCTTTGGTCGATGGTTTGTTCTAATTCTCCAATAGTTTTCTCCAG TTCTGTTTTGCGTGACTTCATTTTGACTACATGAAGAAAATATTGTGAAA CATGAGAAAGTGAATTAACAAACCATCACCAGGGTAGATCCTCCAGATCA ATTTATAGCAGTCCATTTTGAGAATTTTTTTTATCAAAACGAGGCAAGTT CTGCTCGTGACATAATTCATGATGATACATGAAAGACTAAAGGATTGTGA GTGAATCTAAAATGTATTGATTTCTGTAGAAAAATTATAGATTCGACATC ATGGTGAGAAAGTTGAAGAAATTGAATGTGAGGTGATATAAAATGAAGGA AACTGAAACAGCCAGTGTCCTTGTATTTCGTTTCGTTTCCCGTATCTAAA TAATTGATTGACAGCTTGACTGTGTTTTTCAAACCCTCGTTGCTACGATA TCTTCTTTCTTTGAAATGGAAGAATTTTTCGCGATTTTTAACACTTTTTA ATTTCTTTGTTATCACAGTTATAGCATGATAGAGAAGACAGACTACGACC TTTCAATTTATTCATGGTTTGTTTGAATCGTCTTTTAAAGTTGTATTCAA TTTTTGGTAAAAATGAAACAAAAAGCCGTCTCTCCACTATTTTTAAAATT TTGCGGTATTTTTTCATGAAATTTTGCAATTCGATGCACATAGCAAATTG TTTTATACTTATCCAAGTCTTTTTTTTTAGCCTTTTATAATGTATTTTGC TAGAATCATCATTTCTACACTGGGAGAGGCGGGATGAGTGAAAAAACAAC GGGGCAACAAAAAATTCGTCATATGTGTTAAATCAAACAGAAAGTTGCTA AGAGTTGAAGCTACTTAGAGCACAGTTTTATGGCATTTCTTTGATTATTT TTCATATTGTTGGATTTGCTTGCACTGAAAAAGGAAGTTTTTGAAGATAT CAATGATTGACATCATTTTGAAATTTCGAGATACTGTAGACAAAGAAAAT TAGCTTGAAAATATTTTCTACGGACAAGATTTTAGTTTGGGTTGGAAGAG TTAGAGAGATTATATTAGAACGGAATTCGACCTAAAGAATTCAAAAATGA CCTAGTAACCTGTAGCGACCAAGAGTTTTGTTCGAGAAAGAGCGATATTT GAGTAAGAGAGATATTTAAGTAAGACTGTTTTCTAGAGCATTAGCATATT CGAGGCTCAATATTTTGCGAGAGAGGCGAGACCAATTTGATTAGTTGTTT TACGGGCCCGACCGACCCTCAAGTTCCAAAAATCGAAATAAAATAGATTT TGGTAGTATATTTTTATTTTCATTGCTTTACAGACTGCCAAATTTTCAAA ATTTTGGTAGTTTTTCCAAGGTTTTAAGAATTTTTCATTTTATCCATGAA TTTGACCTTTTTGTGTCTTTTAGGAGATCTTATAGGCCAAATTCTACTTT TATTTTTATATTTTTTCGCCGACCGACCGACCCTCTTCTTTGGGTAGCTT GGCCCGTAAAACAACAAATTAGATTGGCCTCGCTTAAAGACAGCTTACGA AAAGTGTGGAATCTCAGATAAGCTGTTTCATGATAAAGCAAATATAACTG AGGGAAAGAGCTCATTATCAGATAATGCTATGTGAAGCTCTAGAGAGAGA TACATATAAAAGAGAGAAAGTGAAATACCATTTAAACTGATTAACATTGC ATGCCTATTATCTTTTAGTGTGGTTTCTTTTAGCAATTTACATGATAACT AAATTGAAAAGCTTTTAAAAGTGGTCTCTTGATGTAGAAAATACTCTATC GTTATTAAGGGAGATAACAACATTCATTATTACGAGAAAGCGTATTAAGT TGTAGTAAGGAAAAATGGCGTGCGATCAAGGTATATTTCATTTTTTTGAC TGGGAGCCTCGCAAAATCTTTATAAAAACTATCATTTTTAGTGGTAGAGT CAACAACAAGCAGTATGTATATAATAACGAAAGATTGATCAACTAAGAGA ATTTTTATCTAGCAGATTCTTCCTGCTGTTATCAAATTCAAAACAAACAA AATTTCTCTTTAATTTTTTGAACTCCATCAAATTCTCTTATGAGGTATTT TGAGTGGAAAGAGGAAGAGATATAATAAGTTTTATCTTACAAAATCCTCT GAAGAGATAGATGTTAACATAACATTTATTTATTCGGAACATTCGTCAGC ACAAGGAGGTGGCGGTTCAGGGTTTGCTGGGAGCAGGCTGGACCCTTTTT CGTCATGATCGGCAAGATTCGACAAAATTAGCTAGATTTGCAGAGTTTAT GGGTCCATTGTTGGAAAACTGGCGAGATCACTAAGTCCAAAAACCTGAAG TATGGTTGCGGCTCTTGCTTATCATATTTTTAGCCCCAACCCCTACAAAA TTTTGGTGCGGACTCGAAAAAGATAACATGCAGTTTCTTCCTCGCCGTGA ATAAATGTTCTTTTAGTTATTGGCGGATATTAGGTATTTAAGTTCTTTTT ATTTTCTACTAGCCATGTACGACAAGACATTATCGAACACCTTCATCATA TTGTTAGCGTTGACGTGCTACACTTCAGTTCTGGTGGTTTTAGCTCTGGT GTACCCAACCACTCAAATCATCAACATACAACTCAAAGGCTTTGAATATC AGAATCACCAGAGACGAGATGTCGAAGATTTGGAAAATGAAATTCAAAGT GTTTTTTCACCGGAGAAATGCAAAGAGGATGAAAAGATGCGTTTGATCAC CTCAGGTTATGACAAAAGAACAGAAGAGATTACGTCATATATTGACTGTC ATTGCTCGAAAAGGAATAAGTGTGTACCTAACACACGTAAGTAATGAAAG GTTCTCGGATTCTTAAATTGCCCAACTTTCCCAACATCTTTAAAAAGCTT GATTTAAATACAAAAATTTATAATCTAGTTGCTTTACTTTAAAGTGATCT TGTTAGACGCTATAATTATTTTAGAAAACTCTCCAAAATCTTCCAATAAT AGTGAGAGGTTTAAAATTGATCGAAATTTGCGCATATATTCTTCCTCGGG GGGGGGGGGGGGTCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNGATTACGGTATTTCATTTTCTACCGGTAT CGGTATTTAGGTAATTAGGCTTCTTTTATCGACGGTATTACGGTATTTGA CCCAAATTTTTGTCGGTATGACAGTATTTAAGACCCCTGAAGCCCCCCTT CCTCTAAGTCGGAGCCATGCGACACCTTCCACTGACCCTGTGTAAAGTCG ACTCAAAATGAGCACTGTGAAAATGAGAGGTCAGACTCATTCTAGTATTT TTCTTTCACTTTCAGTAGGCAGAATCTCAGTCAACATGAATGTAACAAGA ATGGATGAAGTCTTCAAGGAGAGTTTCACAAAAATCCTCAATCCTGGTGG TTGGTATGCTCCAAAACAATGCAAAACGAGCTCAGTAAGCCAAATTGAAA TATCTAATTTGTAAAGACTCTTTTAACAGTCAAGAACACCTTTAAGGTGG ATTCCCCCTGACTCAACAGGGTATTTCAGAGAAAAAATAAAAAAAACCTT TTTTTTGAACCAGACCCTCAGGACACATCTATCTTACGCAGAATTTATCG TAGAATCAGAATATCACATCCATTTGGTCTCAAATTTAATTGCTTTTTCG GAAATTGATTTTTCAGAGGCATGGTATATAAAATTTTTGAAAAAAAAATC AACGTTTTTTGTCATTTGCCCCTGGGAAGGCAAAGCGCAATTGCCGACCG TTTCCGTACGCCCAAGCGCCCATTTCGCGCCCCTAAAGCCTCCTTTTCGT GCAGATCCAATTTCGTGACTTTTCACACGGGATTGTTTTCAAAAATCGCT CTTAGAAAGCTCAACAGTCAGACCAAGCTGTATAATATTAGTGACTGAAG AAATCTCAAGAAATCTGACTGGTTAGTACTAAAACATGGGGAAACCAAGC TCTACTAAACGTGAAAGAGCTTCTGGTAATGCAGGTCGTTGCACAAAAGC AAGATCAAAGGCTCTTTATGCTCCAAAGAAGAAAACTTACAACTTCGAGA AGAAGCGACCGACTGCGACTACGGCTTCAAAATCGTCAATCGACAACACT TCAAACAAGGAAAGTGAACTTCCAGAGACTGCATCTAGCTCTAAAATTGG AAGTACAACTATACCTGAGACTCCTGAAAAATCAAGACCAACTGAAAATA ACAGCAGTACTACAAACCCTGGTCCAAAAATGATTCACGGCTACCGTTTT GTGGATATGACGATATTAGCGTCAATCTTCACCGTCCTTAGTTGCCCTGG ATGTAATGGTGTACGTTGTCTAAACCTCCATGAAAATGATGTTAAAAAGA AAGGACTAGCAAGCCATCTTGTTCTTCAATGCTCTGTGTGTCTTTATGAG CAATCATTTTTCACTTCGAAGCAAGTGCAATACCCGAATGAAGGACGCGG TGGTGCTAAATTCTTCGATGTGAATGCTCGGTCAATTTATGCTTCACGAC AAATAGGTGGAGGCCATGAACATTTGAAAAAGTTTTGCACTTACATGAAT ATGCCTCCACCAGCTCTTGAAGGAAGCTATAGCAAAATGACAAAGAAATT GAAGGAAGCGGCAAAAACTGTTGCTGAAAAAAGCATGTCTGATGCTGCCG CTGAACTGCGCGGGGAAGCAGAATCAGCTGACGTTGGCGTTTCTATTGAC GGGACATGGCAGAGAAAGGGATATACTTCCATGAATGGTGTTGTGACTGC TATATCAGTGGATAATGGAAAGGTTCTTGACACAGCTATCATGTCAAAGA ATTGTAAAGGCTGTACCAAAATGAAGTCTGTTAAAACCACTGATCCGCAA CGATATGACGCGTGGAAAGCTTCTCACAAATGTGGGCTCAATTTCAAAGG ATCTTCCCCAGCAATGGAAAAAGAGGGAGCAATAAACATTTACAATAACT CTACTAAGAAACATGGGCTATATTACACTTCATTTTTTGGTGACGGTGAT TCAAAATCGTTTACGGCGGTACAAAATACCTATGGTCCGCGCAAGCCTGT AAAGAAACATGAATGTATTGGCCACTATCAAAAAAGAGTCGGAACTCGTC TTCGGAAATTGAAGAAGTTAAACAAACGCCTAGGAGGTGCAGGAAGATTG ACTGATGCCAAGATAGATTGTCTCCAAAATTATTTTGGCATCGCACTGCG TCAGAATGTGAATAATCTTGACGAAATGGTGAAATCAACCAAAGCGTCAA TGTTTCATGTTGCGGGATACCATGACAACTGCCCCAATCATAAAGATAGC TGGTGTCAATACAATCTTGACAAATTAAATGGCACCAATTTCTACAAAAA GAAAGGCTTCCCTTTAGATGTACGTCAAGCAATTTTGCCAACCTACAATG ATTTATGCACACGCGAAAAACTCGAAAAATGCTTACACGGTCGTACTCAA AACGCAAACGAGAGTTTTAACGGTATGATTTGGAACCGCATCCCAAAAGC CAACCATGTGGGTTTACACATCCTCAGCTTTGCTGTCTATGATGCTATTT CTCATTTCAACAATGGTGGTATAGCAGCCTACAACATCTTAACTAAAATG AACATGGAAGCAGGAAAGTACACGGTCAAAGGTCTAAACCTTCAGGATTT GATCCGTAAACGACGGTCAGCTTACCGAATGTCTTCTCCCCAAACAAAGA GAAGAAAAGTTATCAGACACCTGAGAAAAACAAAACAAGACAAATTAATT GAAAAAGAAGGGAAAACTTATGAATATGGTGGCTTTGAATGTTGATTTAA TGTAGATTTGTAGAGACTTTATGTTTTTAGATTCAAAATATCAGTTATAA TTTTTAGCGCGTTTTCTTATTTTTGCAAGTTTTTTCAACACGGGTCGGGG CATAATTTCTGAACCGCTTTCTCAATCAAGCTCATTTTTTCAGTGAATGT TTATTGGAAATAAAAGGATGTTTTGGTTGTAGAGTTTTTTTGAATTTCAC CATAAAAAGTGTTTTATGTTTGAAGCAACTTTTGTATTTTTTTGTATTTT TTGCCGGTCCGAAGAGTTAAGCGGTCTGTTCTATGAGGTTCAAATTTCAA AATTTTAATTCACCCAAAACATGCATCTATATAAGGGTGATCAACTCAGA AAGTTTCATTGGTATATCTTTTTAACTTCTCCGGAAATTGACCGACCCGT GTTTGACCTATTTTGGCACTTTTCGGTGCACGGCTCCGGCCGCCATTATG GATTTTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00064057TCONS_00064057Clytia hemisphaericatranscript
TCONS_00064056TCONS_00064056Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00064057-proteinTCONS_00064057-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_407supercontigscaffold_407:97813..104269 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
2.46 2.53 2.05 1.52 11.73 8.86 12.13 11.91 7.59 8.82 7.85 6.03 5.62 6.45 4.52 4.98 5.86 5.56 4.73 5.15 6.94 7.27 3.65 4.68 7.19 8.32 4.93 3.56 10.73 9.71