XLOC_040013 (gene) - C. hemisphaerica

Overview
NameXLOC_040013
Unique NameXLOC_040013
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_401:35074..41590+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_040013 ID=XLOC_040013|Name=XLOC_040013|organism=Clytia hemisphaerica|type=gene|length=6517bp|location=Sequence derived from alignment at scaffold_401:35074..41590+ (Clytia hemisphaerica)
GTTCCACTCACCCTGAAATGCATTATAAAGGTATAATTGTGAGGGGGGCC TAGACAAATTTTCCAGAAATTAGCTTGAAATGCTCTGTAACCTTAGCCCT GAAGTGAAAAAtagagttgcttataaaaaaaatgtgtaggcGCTTTATGA CCTCTCcctttttggcgccccttttgAAAAACCTCAACTTCCCTCAgacg tattttttttaatttttagattcatTTGGCACTTTGACAATGCCAAATTT CCAACCTATGAGGAGCTATTCTTGTATGAAGATAACGAGGAAGTGAATGC TCTAATCGACAATTTCGAATTGAACttgggtttgtttttttatctaacTA AAAATATAGTTAACATGTGTTTTCTATTACTTCAATCCTTTTCGAATCTA TACTTGGAGATATTgcaagaaaaattgatgaaCAAGAACTTCGGTAAGGT CAAATAAAAGGGAGAATTCTCTGTTCCATAATAATTGGCAGTGGGCGAAg gatttttacaatttatttaCGGGCATTGTCAACTTAAGaggttaaaataa aataatgaaaaaacaaGAGTAACAACatgaattttcttattttttgccaA TATTTCTTAGTGTCGAAGAAATAACTATAAGCCCTCAAAACTTCAAAGAT ActaaaaaaacaggaaaaactATATTTGAAACATCGTATTTTTTTCTTGC CCTCACTTACTTTTCCTGTTAAATTCGGGGTAGACTCTCCTCGTTCACAT TTCTTAGTTTTTCTCGGGAAATTAATCCCGAATTTTTTTCCGTCATAACC ATAATACCACCCGAAACTCTAAACTTTGGAAACCAAATTAAACTAGAAAT ACTTGATATTTTTAGTTAACCATTTGGCACAACTGTACTCTGTCGCCGAC AACGATACAGAATACAGTCTCATTGAAGAAAAGGTGCTGGTTGTCGAACC CAAAGTTAAGGAGTACGGACTGACAACCGAAGCAAACAAAACTTTTGGCG CCTTCCATAATGAAGTTAGGGAGGTGATGATGAAATAtgaagatattcaa tttcttactGGTAAGATTAAACCAGAAATTTAGGAAAGGGAGATAGGAAT Cgttctactttaatgggataagatttcgcggggattaaatttcgtggatt tcgcggattttggcCCTATCCACGAAaataaatccccgcgaaaattttga aaaatgtctccGGTGAATGTcacttttgattgaataatcacttgtggttc ttCAAATAAACCCAAATTTGGAGCAATCCATCCAAAAAGTAAAATCGCAA ATTTACCAGCTAGGAACTTGACAAGCCTGTTAAATCTAATTCTCAACCAT GTAATATTTCTGTTATTTTTATCCGTATCATTGCGAATTGAATAGAATAT ACAAGGCTGGGAACTGACAAGCCTGTTAAATTTAAAATCTCAACCATGTA ATATTTCTGTTATTCTTATCTCTCTCATGGTGATTTGAAGAAATCACAAG GCTGGGTATTCGGAAACTTTCCGAGCCTCTTAAATCTAAATTCCGGACCC TAAAATATACCCCCAATATACCACTGACATTATTTTATCTAcattggaaa tcaaaaaaatcacaagGTTAGGAAAGTTTCGAAATTCACATGCCTGTGaa atcagagatttgggaaaggAAGATAGGTATCGGCGTATTCATGTATAGAA ATATGTGCTGTTATagtcttttgtttcttttgaaatcattgaagTATAAC TACATAACAACCTTTTCTGCCAATCAGAGTAAGGAATTATAAAACCTCTT TGCCAAATCTTTTGAGCCCGTGCCAAGAAAAACTGACTCTATCAACAGAA TCCTGGTAATATTTTCTACCTGGACAAATTTACATTTGACTTCCAAAAAT TCTTGCTGCTAAGATATTCGTAAATTTAGTTTTTAGTCCTTGCGACAGAG TGCAGAGTTTCATTCacataaaaaaactttcattcaAATCTGAAAAGACT TCCTTTGTTAAATAGAGTATTCCCATATGAATACTACTTCATCGTTGTGt ttcaaataatcaaaattgaaataaaaatgtcttttAATGATCTTTTTATA GTCGTTTCACGTACATATAGTTGAACAGCACCTCCCCAGGGGCGGATGAA GACTATATGAAAGTTATGAATtcatatggtcagattttcttgaataacat atttctttacattacacgttttcaaaataatcaattttaCCAACAGTCTC TCAGGAAATTCCGTCTCTCATCAGAAATCAGAGCGAGAGAGATATTGAGC GCTCAAAACTTGCGCGAGCGGCGGGCACGCACAATCGCGCGCGTCGTTAG TGCGTTTCGCCAAAATGGTAGCGTGCACTCTGCTTTCAAAGATTTCGCTC TGTGGATGTTTACAGCTCTCGGCTCTTTGCCGTTGGTACTTTCTCTCGAA ACTGTTTGTTTTTATCTGAAGTCTGTTTACAAAATACTGAAGGAGGAGTT TGCATTCGTGATTTCTCAACttgatttgcatacttttcacGAATTGTAAT CTTTTTTTACGATGAAAGAGGCTTTTCATGCATGAGGAATTTCGTGTACT GgcaaatgtttacaaaaattgctAGGAAGACTGGCTTGTAAATCTTTTGA GAATGTTTACATGAAATCAAAACAGTAGAGTATCAAATCACAAATAAAAA CATGGTTTCTCAGCAGACATATGTCTCAGCAAGGAACTTGGTCTCAGCAG GCAGACACATTGAAGAAAGCCACtacaacaaaaaagtaaaaacaacaaag agtgATTCCAAGTGACATTGATGTCAGAACTGATTTACATCGTTTGGAAT TATTGCTGGAAGACAAAAAAACTAGTTGCTCATCGATACTTCGCTTGAAG GAAAGGTAAagcttgatttttttattttcgggATACCGTCAAGTAGTGAT ACATTGCACTTCCCTGCCATACTTTGCACTCACCTCATTTCCTTTGTTTA TGTTCTCAAAAATCGGTCAGCACTATAAACTATGTTTTATTATTCACTTG AACCATTTGATCAATCATTTataaaaaagcaacaaaaagttGCAGATCAG ATTACTCCCAGATTACTACTTGAAATAATTAAGAAGCAATTAATTGAACg aattgaaatcaaaaaatgcCAGCGTgctcattgttttttttgttatttgc aCAAGTGATATAGTCGAAATTTTTTTACATccagcttcttttttttttat tatacatTTAACAATTTTGAGCATGATTGACCTGCTTGATTTGTACGAAT TGCCCCTTTTTATCACCATGGTTTCACTTTAAGTTTATATTGCTATTCGA TAAAATACACAGTGCAAAGTATGGCAGAGAAGTGCAATGTATCACTACTT GACGGTAGtcatcaaacaacaaaaagTATAAACAACACGATAAGCAATAT GTGTTTTTAGAAGGTTCGTTGTAATTCTTGCACAAGCAAGCACAATACAT CTGTTGTTTGGTTTACTTATTCGTACTTTGAGTTGAGCaagaattaattt tcttttatcTGCCACAAATTTAAGTCACATCAAGTCTGGAATCCGGGCCA GCCCACAGAGTTTTCCAAATCATCTTTAACCCTATTTGCACTGGAGTTCT CGAATCTTTTGACTCTACCAACTTATTTTTTCATATCGTTTTTAAAAAAA CGTTAGGCTAAATATTATGATGACAACAGACAAAAGTGGCTGTTCATTCT GTCTGCAGTTTATAGTATCGGTCAAAACACAAGATTTTAAAACACTGAAA ATGCCATAAAACCTGAACCACTTCAGTAAATCCCatgaaattttggacaa ttatTCAGTTTTAGACATAGAATAAGActgcataaattttttttcaataa ttcctTTAGTTTGTGACCTCATTTTTCCAGGGTGGACCGCATCatgattt tacgtttttcttgTAATTGGgctaaatttctcaaaaaatactgCTTTTAA TGACATTGATTTTCCTCATTTAAACCTAAATACTACTTtggtaccaaatt tcatgtcaaTAGACAATACCATCTCTTTCATTGAAGAGCTAAGagcaaat tttgtaaaattgaatcattttccAGTCTGTCTGGTTAGTTGGACATGAAT TGAGGGTTGTCACcgtcaacttttttttttcaatttcctcAAAAGATCTT TCAACAATTTTATCTATGTCGACATTGATGTGAGTTTCCTGTTTTCAatg ttgttatatatcttttacCCTGAAATGAAAAGTAAAGTCAAATTATGATT GTCGACAACTTATCATtcttccatttttgttttgtagGTATGAAAATGTC TTATCAAAGGCAAGGAAGGAAAAGGTTTTGACAGCTGTTACAATCGACGT TCTAGAATGCTATAGAATAGGTTAACGTCCATTGCACTTGTGTACATTCA TCGTGAGATTGAACTCGACCCAGAGGAAGTGGTCGATGAATTCGCAAAAA ACAATTGATATAGGATGGAATTCTGTGATATTCTTGCAGACGCTGAAGAT TGACATTTTTTTGCTATCTAGAGTTTTGCTCCGAAAACTCCAGTTGGATT TTTCTTATGACTGAAActtggaaaaataatttgatttgcTTTCTGAAGGC AAGTAATCTAATGAACTATAAAAGTTGGTTGAGAATCACTCACTCGTTGC TTATTCATTTTGACTTTACCTATTTTCTTtcgatttgttttcaaaattaa tctGCTCGATGATTCTAATCTAATCATGCTTTATTATTTAATCGAGCTTT CAAGCAAGAAATCTTGCATTTGAGATTGGTATTATCTATTGCCTTTTAGT CTGTGTTTATTACAATGTAGATAATAGTTTATAtgtaaaattttacaaaa tattcTATTTCTTAACACTTCCATTTCTACAATATAATGAAAGATttttg ttattataaaaaaacaatcttCTTCGCCCTGACATTCCTGGTCTCGCTTC ATATGATTTCAGAGAAGCTACAAAAAAGTTAGGTCAACTTCTCTCTGACT GctaggtttttgtttttgcccTGAATAAATGCAAAGTAAAACATATTTAG AGTCATCGGGAAAAtcgatacaatttttttttatcccAATTTAAGAGATT CCAGATGTTACAGAAAGTTTAGAACAACATTCACAAAAAGTGATGAAACA TTTAGTTCGAGGGTTTGATTTTAATCTATTTTAAGGACTTGAAACTTGAA GAATCGTAAGGCTCTAGGGGGCTTCGCCCCCTGAACCCCCACCAGGGCCA GCCCTGGACCCGTAGGGGGGCTTAGAGCGCCCCCCAAACCCCCTGCTCTT TTTATCACGCCTTCGGCGTGAAAATGCTCCTACGGAGCATTCTTTCATTT CGGGGAAATTATCGGGGTTTTCGTTATCCGAATCGGGGAAATCGGATCTT TCATATGGTCGCAAAATATCCTAAATCCGCCCCTGCTCCCCTTCTCAGAG TTCCGAattgaaaggaaaagaaaggAATATATATCATAAAAACGTGTCTA TGAATTCAATTCCTATCTTcctttcccaaatctctggtgAAATCTACTTT CTCAACCCTGACATATTACAATGTTATTTTTATCCATGTAGACAATTGAA GAAATCACAAGGTAGGGAAAGTTTTGAGATTCACgaccattttaattttt tttcctgtgGTTATTAGAGTTGGCTTTCTTTTCCAGATGGCAATAAGAAG AAATACACTCCACGTATAGACTTTTTGAAAACACGCTTGCACACAAAATC TTTCTAAACGTAACAAACCCTACTATGCCTAATATCGTCAGCTACATAAA GAAGTagggtttggtacaggctaatcAAAGTGCCGACAATGCCCATTTTC GATCACCACGTCCCTGTTAGTGttcatcttcttcattttccaattttgat aTCTCAGGAAATTACGGGAAAGCGAAGGCGTTGGTGCTGAGATTGTCAGC TGTTGTCCAAAATTTGTTATGGTTTGTCAATAAATTGGATGACAAAGGTG AGTTTTTAAATTTACACTCAAATGTTTGTTTCAatcttttttccttaaaa aagttTTCTCCCAAGGACTTTCGCCTTGAAGCTAGCCAACTGCATATACA CCATAGCTAGCTAAACTATTGTGGTTAGgatgggaaattccctttttcaG GAATACGAATATGTATTGAATGATGCGAGgtccttttaaaaaaagtgaaa atgtgCTTCCATTCAGGACTCCACCTTAAAAAAACGACTTCAAATACGGT TTGCACTATGCGAATTGACCCATGTTCCCCTCTGCACCCGTGATGTTCTT TAATATACATTGCTGGTTTTGTTTTCAATATGCTCAAATGATTATACTGG CTAAATCTTTTATGTGGCTGCTATCAATAGTGGAAATCAAAATGACTCGC TTGTGTTCTAGATGCGACAATGAAGGAAAGCGATACAACATCTGAAAAAG ACGACGCGGAAGAAGGT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063822TCONS_00063822Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_401supercontigscaffold_401:35074..41590 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1 2.03 0.78 0.68 63.62 41.25 69.95 75.77 60.25 62.01 80.23 54.33 35.16 36.36 17.22 22.32 17.5 21.02 23.48 27.74 21.43 21.56 11.38 13.24 52.3 60.76 24.8 22.07 14.09 11.57