XLOC_039998 (gene) - C. hemisphaerica

Overview
NameXLOC_039998
Unique NameXLOC_039998
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_400:63501..73117-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039998 ID=XLOC_039998|Name=XLOC_039998|organism=Clytia hemisphaerica|type=gene|length=9617bp|location=Sequence derived from alignment at scaffold_400:63501..73117- (Clytia hemisphaerica)
GCACAACATATTTCTCGCTCGCACAGCATATTTCTCGCTCGCACAACATA TTTCTCGCTCGCACAACATATTTCTCGCTCGCACAGCATATTTCTCGCGC ACAGTCATGTTCTCGCGCGCAGCAATAATGAGCCTTCTGGGCCATCGTAG ATGGCAGCAAGTACTCTACCAGAAGAAGCCTTATTGAAATTTAAACAACG TTAAAAAAATTTAAAAAATTTAAAAATTAAAAAAAACTTCACTTCATGGC CATCTAACTCAATGATTTTGTCCACCCCCTGTATGGAAATAAAACGCAAG GGCCCAATAATTGCTATCAAGCGAAAGAAGTCCTTTCCATTTCTAAATTA TCAGATTTACTGCATTTATCACCTGCGTGAGTCAATTGATGTTTTCTCAA GCTGTTTGATTGAGAAAATGTCTTGCCACAAACATTGCATTCGTAAGGTT TTTCACCAGTGTGAGTTCGAGTGTGTGATTTCAAATCACTTGATGTTCTG AATCCTTTCTCACAATAGGTGCATTTGTATGGTTTCTCTCCTGTATGGAT TCTAACATGCACTTTTAAATTGCTTGAAGAAGAAAACGCTTTCTCACAAT CACTGCATTTATAAGGTTTTTCACCAGTGTGAGTGCGAGTATGTATTTTC AAATCACTTGATGTCCTGAATCCTTTCTCGCAATAAGCGCAACTGAATGT TCTATTATCAGATAAGTCACTTTTTAAAGGTCTCTCGCCAGTATGGGTAA ATTGATGTTTTCTCAAGCTGTTTGATTGAGAGAATTTCTTGCCACAAACA TTGCACTCGTAAGGTTTTTCACCAGTGTGAGTTCGAGTGTGCGATTTCAA ATCACTTGATGTCCTGAATCCTTTCTCACAATAAGTGCATTTGTATGGTT TCTCTCCTGTATGGATTCTAGCATGCCCTTTTAACGCGCTAGTATCACGA AAAGCTTTGCCACAAATATCGCATTTGGAAGGTTTCTCACAAGTGTGAGT CAATAGATGTTTCTTTAAATAGCTTGAAGAAGAACATGTTTTCTCACAAA CATTGCATTTATAAGGTTTTTCACCAGTGTGAGTTCGAGTGTGTATTTTC AAATCACTTGATGTCCTGAATCCTTTCTCGCAATAACCACATTTGTAAGG CTGTTCTCCTGTATGGATTCTAACATGCACCCTTAACGCACTAATATCAC GAAAAGCTTTGTCACAAATATCGCATTTGAAAGGTTTCTCACCAGTGTGG GTCAATAGATGTTTCTTTAAATTGCTTGAAGAAGAACATGTCTTCTCACA AACATCACACTCATAATGTTTTTCACCAGTGTGAGTTCGAGTGTGTATTT TCAAACCACTTGATGTCCTGAATTCTTTCTCGCAATAACCACATTTGTAA GGCTGTTCTCCTGTATGGATTCTAACATGCACTCTTAACGCGCTAGTATC ACGAAAAGCTTTGTCACAAATATCGCATTTGAAAGGTTTCTCACCAAGGT GGGTCAACTGATGTTTCTTTAAATTGCTTGAAGAAGAACATGTCTTCTCA CAACCACTGCATTTATAAGGTTTTTCACCAGTGTGAGTACGAGTATGTAT TTTCAAATCACTTGATGTCCTGAATCCTTTCTCGCAATAAGCACAACTGA ATGTTCTATTTTCAAGATGTATTTCAACTTTGTGATCAGCTTCTTGTGGG CTACCAACTATTTTTGAATTTGGGATATTTTTTAAATCAACTAGGATAAC TCGAGGTTGGAACATCCAATCTTTAAATGGCATAGTTGGTTGAGCTAAAA ATAGAAAAAGACTTTTAAAAATATCTCAAATAGTTTGACTATAGCTACTC TCAGGTACCTAACAACGGGTGGTCTAGAATCAGCAAAATAAATAAACATT TTTCTAGATCAGATAGGGCTGGTAAAATTTAAGGAGGCTCCGAGGAAAGG AATAGGCTTTCAAAAAATTATTTTCAAAAAAACGCTAAGCAGGAGAGAAG TCTGAATAGCAATGTTCTGGATTGAAATTTTATTTGCAGGGACACATATT ATGAAATGAAGATCTAGCAAGTCAAATTCCTAAATTAACTAACATCGTAT TTCATGACCCTTTAATTGATTTGTGAAAAATTTATCATTGTCTCATGTGC CAATATATCAAAAATCATAATTCATAATTTTCATAATCATTCATTTAACT TGCGGTGTGTAAAAAGATATGTTAAAACTTGAAATGCAAGAAGAAGTTTG AATAAGAATGTGCAGGGTTTGAAAAGAAAGTTCTGAGGTAGTTGTGTTAA TAAAATCTTGTTCCAAGAATTATATTACCTTTGTAATTGAAATAGGGCAT TTCTTCGTTATTTTCTTCATTTTCAATTTTGACAATTACTTCTTCACATG TTGATTTATCAGTCACCAAATCCTCTAAAGTAGAAAAGGCGGCAATAAAA GTTAATAAGATAGTAAAATTTTATGTTTCAAATTAATGACATATGTTTCA TAGAGATGTTAACAGACAAACAATTTTGTGACTGTCAACACATTGTGAAA TAAAAAAGAAAACTTATTTGATAAAATATGGTAGGTCTTACTATTATTCG TTGGCAATTCTAAGATTTTCTAAAATGCACTTTTAACGTACTCGATACAC GAAATCCCTTATCACAAATATCACATTTATAGGGTTTTTCACCAGTGTGA GTCAACTGATGTTTCTTCAAGTTGCTTGAGCAGGAAAACGCTTTCTCACA ATCACTGCATTCATAAGGTTTTTCACCAGTGTGAGTCAACTGATGTTTCT TCAAGTTGCTTGAGCAGGAAAACGCTTTCTCACAATCACTGCATTCATAA GGTTTTTCACCAGTGTGAGTACGAGTATGTATTTTCAAATCACTTGATGT CCTGAATCCTTTCTCACAATAAGCGCAACCGAATGTTCTATTATCAGATA AGTCACTTTTTAAACGTCTCTCGCCAGTATGGGTAAATTGATGTTTTCGC AAGCTGTTTGATTGAGAGAATTTCTTGCCACAAACATTGCACTCGTAAGG TTTTTCACCAGTGTGAGTTCGAGTGTGCGATTTCAAATCACTTGATGTTC TGAATCCTTTCTCACAATAAACGCAACTGAATTTTCTACTTTCAAGATGT ATTTCAACTTTGTGATCAGCTTCTTGTGGGCTGCCAACTATTTTTGAATT TGGGATATTTTTTAAATAAACTAGGATAACTCGAGGCTGGAATATCCAAT CTTCAAATGGCATGGTTGGTTGAGCTAAAAAAAAAGACTTTAAAAATATC TCGGATAGTCTGACTATAGTTACTCAAAGGTACTTAACAACAGGTGGTCT AGAATCAGCAAAATAATTAAACATTTTTGCTCCGGCCTAGGAGCCTTAAA TTCTCTCTCGTCCGACGACGACGGTCAAGACATTGTTATGGCTGAAAATG ATCATTTTTGGACTTATTGTTGTAATTTCATCGCGGCTGGCGACCGTTCT TTTTGATTTTCCGAGGGCAACACAGATTCTTTCCAAACATACCACTGTAG GAATTCAATAAAAGATACTAAAACACATTTCCTGTGTAAATTTGAACAAG ATTGGACAAATTTTCACAGTCAGACAGTGTTATGGCTGAAAATGATCATT TTTTGGACTTTTCAAAGACTGGGGTGACCTTTCCTTTTTAAGATTTTTCA AACCGGACACAGGTTTTTTCCAAACATACCACTCAGGGGGGGGGGGGCNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNTTTGTCATGTACTACCTGTGTAC TATAATTGGGGTGTTGGGTCCAAAATCGATTTTGATTTTTACTACCTGTG TACCAAAATAGAGGTGTTGGGTCCAAAATCGATGATAACAGTGTGGAAAT AAAAGGTTCAGAAATTATCTGCTAAAATAGAAATGTAAAGTTGTTCTATT ATAAATTGATCAAGCCAAGTTTGTCCAAGATCATTCTTCCAAACTTCTTG GAATGAATTGAAATCCCACCAGATCCCACTGAAATAAAGGTTTATCGAGT CAATGTAAACATTCGAACATTTGAATTTAAACATTCAACATTCGTACATT AGAGGTGCCAACTCTCACGCATTGGTTGTGAGACTCATGCATTTCCACAT GGTCTCATGTAATTTTTGAAAAGTTTGATTTCTCACGCATTTTGGATTTT TGAGAACATTTTTCCTGTTTTTCCGATTTTTGGAAAAAAGTTTTCCCAAT TTCCCGATTTNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNCCGATTTTCGGAAAAAAGTTTCTCTATT TTCCGGATTTTTCCAGGTAGTAACCGGTAGTAAATGGGGGGTATGGGGTG GTTTTGGTTTTTTTCCAGGTACTAACCGGTAGTAAATAGGGGGTATGGGG TGGTTTTGGGATTTTTCCATGTAGTATGGTGTACTTCAGGGGTGGGTGGG TGTCAAGTTTTGAAAAATACCTTGTAGTACACATACATGCCGCCTTCTAG TACACTGACCCCCCCCCTGTACCACTATTAATTATGTACACACTATCGTA CCATTTTATTTGATTTATCCTAGTCTCCTCCAAGTATTATCCCAACAGAA TAATGCTTAGCTAAAAGTCCTGGCCTCTAATTTAGGCTATTTTTCTCCCG GTCCGGACAATAAAATCAACGGGCGCATCAGTGTTTGGCTATTGGCTAGT TTAGAAAAATATAAATTTATAAGAACTTGGAGTTACAAATATTGACTTCT AAACGTTTACCTCCTTTAGATCCAATTTTGTACTTTTTAGTCGGGGATGA GGGGGGAGGTGGTTGGGTCAGCACTTTAGGCAAGAAATTGCATGTGTAAT CACTTAGAAGACCTAAACTTCCAGCTGGTTTATTTATTCATTAAGATTAT TTCTCATACTCGCTCTACAATGAAATTATTACTTTGCTTTCTGATTATTA GTTTGTGGACAACTTTTTAATACAACTCAACAAACTCATCCTTCTCATCT TCTAATCTCTTAAGCAGGAGCTTATCTGGTTTATTCTAGATCAGATAAGG CTGGTACAATTTAAGGAGGCTCCGAGGAAAGGAATAAGCTTTTAAAAAAT TATTTTCAAAAAAACGCTAAGCAGGAGAGAGGTCTGAATAGCAATGTTCT GGATTGAAATTTTAATTCCAGGGACACATATTATGGAATGAAGATCTAGC AAGTCAAATCCCTAATTAACTAACATCGTATTTCATGACCCTTTAATTGA TTTGTGAAAAATTTATTAATGTCTCATAATGCCAATATATCAAAAATCAT AATTCATAGTTTTCATAATCATTCATTTAACTTGAAGAACTCATGTTAAA CAGAGAGGGGAAACAGAATATATGCGGTGTGTAAAAAGATATGTTAAAAC TTGAAATGCAAGAAGAAGTTTGAATAAGAATGTGCAGGGTTTGAAAAGAA AGTTCTGAGGTAGTTGTGTTAATAAAATATTGTTCCAAGAATTATATTAC CTTTGTAATTGAAATAGGGCATTTCTTCGTTATTTTCTTCATTTTCAATT TTGACAATTACTTCTTCATATGTTGATTTATCATCAGTCACCAAATCCTC TAAAGTAGATAAGGCGACAAGTTAATAAGATAGTATAAATTTATGTTTGA AATTAATGACATATGTTTCATAGAGATGTGAAGAGACAATAAGCAATCTT GTGACTGGCAACATATTGTGAAATATTAAAAGAAAACTTATTTGTTAAAA TATGGAAGTCTTACCATTTTTCGTTGAAGATTCTAAGATTTTCTTCATTA TGTTTTTTTTGTCTTGATTTATTATTATAATTATTTCTCTGAAAGTACAA AAAGTATAAAGAAGTTTCGAAATTTAGTTATTTAATTCGGCTAGTTTCTC ATATTTGCATAAAAGTCAAGTCTAAGAAAACAGTAAGAAAACGTTAAGAA TATTTCACCCTCAATTTTGACAATTTCTTAAGAATACTTGATGCTCATCC AAAGTATTCTTACAAAAGCGTTTATTTCTTATAACATGAGTGGAGTCAAA ACAAGGTGAATTCGGTTACAAATCTGAATAAAGTGTAAATTGGTGTAAAG TGAAAGGGGTTGGAGTAAAGTACCTATCAAGTTATTTCAATCCTATTTAT GTAAATGTTTTCCGAAATATAAAAAAAAAAAGAAAAGTTGTTTGTTAATC GATGGCAGCAAGTACTCTGCCAGAAGAAGCCTTATTGAAATTTAAACAAC GTTAAAAAAATTCAAAAAATTTAAAAAACTTCATGGTCATCTAACTCAAT GACAACATAAAATATTCATACAAGGGGTTAGACTCCTGGCTAACAGGGGG TGGACAAAATCTTAACAAGTTTAAAAAGATTTACTGGAAATGTGCGAATA TCCCCTGGAAAATGGCAAAGAAGACCTTGTTAATATTTCATGTCTTACAG TGGACGAATTAAAATTAGTCTTTTACCCCCTGGAGATTTTAGAATAAATC TTTAATCCCTGGAAAAATGAAAAAACACTCCGTTACAACCCCTGGAGATT CCTCTTTGATTAACGTCTGGAAATATTCGTCTACCCCCTGTATGGATATA AAACGCAAGGGCGGGAGTCTCTAAACATCGACCAGAAATGGCGACCACGA CCAGCTACCACGACCGGCGACCAGATAAATTTGGGTTATCGAGTTTACTT GCTCTCTCCACCGTAGAGAACATCCAAATCGAGTCCACTGAGCACGTGGC TAAAAATTACTCTAGCTAGAGAATACTAAAAGTGACTTTTGACGTTATCA GTCATTTTCTAGACAAAGTGACACTTTTTGACAAAAATATTGACAGGGCA ATTGACACTCTATTCAAGCTCCAAAAGCGTTGAAATGGCTGCTCTACACG TTTTGCAGGTGGCTTTATAATCACTGTAGGTGAGACAGGGGTGAGCTTTA CTCTTCAATTCCATAAATAAATGATCATAAGAGAAAGACTCTATGGTGGA GAGAGCAGATAAACTCGATAACCCAACTTTATCTGGTCGCCGGTCATGGT CGCTGGTTGTGGTCGCCAGTTCTGGTCGATGTTTAGAAACTCCCCTCAAG GGCCTAATACTGCTATACAGCGAAAGAAGTCCTTTCCATTTCCAAATTAT CAGATTTACTGAATTTATCACCTGTGTGAGTCAATTGATGTTTTCTCAAG CTGTTTGATTGAGAGAATGTCTTGCCACAAACATTGCACTCATAAGGTTT TTCACCAGTGTGAGTTCGAGTGTGTGATTTCAAATCACTTGATGTTCTGA ATCCTTTCTCACAATAAATGCATTTGTATGGTTTCTCTCCTGTATGGATT CTAAAATGCACTTTTAACGCACTCGATACACGAAATCCCTTATCACAAAT ATCACATTTATAGGGTTTTTCACCAGTGTGAATCGACTGATGTTTCTTCA AGTTGCTTGAGCAGGAAAACGCTTTCTCACAATCACTGCATTCATAAGGT TTTTCGCCAGTGTGAGTACGAGTGTGTATTTTCAAATCACTTGATGTCCT GAATCCTTTCTCACAATAAGTGCAACTGAATGTTCTATTATCAGATAAGT CACTTTTAAAAGGTCTCTCACCAGTATGGGCAAATTGATGTTTTCTCAGG CTGTTTGATTGAGAGAAAGTCTTGCCACAAACATTGCATTCATAAGGTTT TTCACCAGTGTGAGTTCGAGTGTGCGATTTCAAATCACTTGATGTTCTGA ATACTTTCTCACAATAAGTGCATTTGTATGGTTTCTCTCCTGTATGGATT CTAACATGCCCTTTTAACGCGCTAGTATCACGAAAAGCTTTGCCACAAAT ATCGCATTTGAAAGGTTTCTCACCAGTGTGGGTCAATAGATGTTTCTTTA AATTGCTTGAAGAAGAAAATGTCTTCTCACAATCATTGCATTTATAAGGT TTTTCACCAGTGTGAGTACGAGTATGTATTTTCAAATCACTTGATGTCCT GAATCCTTTCTCGCAATAACCACATTTGTAAGGCTGTTCTCCTGTATGGA TTCTAACATGCACTCTTAACGCGCTAGTATCACAAAAAGCTTTGCCACAA ATATCGCATTTGAAAGGTTTCTCGCCAAGGTGGGTCAACTGATGTTTCTT TAAATTGCTAGAAGAAGAACATGTTTTCTCACAATCATTGCATTTATACG GTTTTTCACCAGTGTGAGTCAATAGATGTTTCGTTAAATTGATTGAAGAA GAACATGTTTTCTCACAATCATTGCATTTATACGGTTTTTCACCAGTGTG AGTACGAGTATGTATTTTCAAATCACTTGATGACCTGAATCCTTTCTCAC AATAAGCACATTTGTAAGGCTGTTCTCCTGTATGGATTCTAACATGCACT TTTAATGTGCTAGTATCACGAAAAGCTTTATCACAAATATCACATTTGAA AGGTTTCTCACCAGTGTGAGTCAATAGATGTTTCGTTAAATTGCTTGAAG AAGAACATGTTTTCTCGCAATCATTGCATTTATACGGTTTTTCACCAGTG TGAGTACGAGTATGTTTTTTCAAATCACTTGATGACCTGAATCCTTTCTC ACAATAACCACATTTGTAAGGCTGTTCTCCTGTATGGATTCTAACATGCA CTTTTAATGTGCTGGTATCACGAAAAGCTTTATCACAAATATCACATTTG AAAGGTTTCTCACCAGTGTGGGTCAATAGATGTTTCTTTAAATTGCTTGA AGAAGAAAATCTCTTCTCACAATCATTGCATTTATAAGGTTTTTCACCAG TGTGAGTACGAGTATGTATTTTCAAATCACTTGATGTCCTGAATCCTTTC TCGCAATAACCACATTTGTAAGGCTGTTCTCCTGTATGGATTCTAACATG CACTTTTAACGCGCTAGTATCACAAAAAGCTTTGCCACAAATATCGCATT TGAAAGGTTTCTCACCAAGGTGGGTCAACTGATGTTTCTTTAAATTGCTA GAAGAAGAACATGTTTTCTCACAATCATTGCATTTATAAGGTTTTTCACC AGTGTGAGTACGAGTATGTATTTTCAAATCACTTGATGTCCTGAATCCTT TCTCGCAATAAGCACAACTGAATTTTCTACTTTCAACATGTGTTTCAACT TTGTGATCAGCTTCTTGTGGGCTGCCAACTATTTTTGAATTTGGGATATT TTTTAAATCAACTAGGATAACTCGAGGTTGGAACATCCAATCTTCGAATA GCATGGTTGGTTGAGCT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063803TCONS_00063803Clytia hemisphaericatranscript
TCONS_00063802TCONS_00063802Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_400supercontigscaffold_400:63501..73117 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
ZNF700zinc finger protein 700 isoform 2 Homo Sapiens
ZNF227PREDICTED: zinc finger protein 227 isoform X2 Homo Sapiens
ZNF99zinc finger protein 99 Homo Sapiens
ZNF841PREDICTED: zinc finger protein 841 isoform X2 Homo Sapiens
ZNF433PREDICTED: zinc finger protein 433 isoform X1 Homo Sapiens
ZNF347PREDICTED: zinc finger protein 347 isoform X2 Homo Sapiens
ZNF84zinc finger protein 84 Homo Sapiens
ZFP62PREDICTED: zinc finger protein 62 homolog isoform X2 Homo Sapiens
ZNF616zinc finger protein 616 Homo Sapiens
ZNF184PREDICTED: zinc finger protein 184 isoform X1 Homo Sapiens
ZNF43zinc finger protein 43 isoform 3 Homo Sapiens
ZNF607PREDICTED: zinc finger protein 607 isoform X1 Homo Sapiens
ZNF234zinc finger protein 234 Homo Sapiens
ZNF600PREDICTED: zinc finger protein 600 isoform X4 Homo Sapiens
ZNF585Azinc finger protein 585A isoform b Homo Sapiens
ZNF585Bzinc finger protein 585B Homo Sapiens
ZNF224PREDICTED: zinc finger protein 224 isoform X1 Homo Sapiens
ZNF226PREDICTED: zinc finger protein 226 isoform X1 Homo Sapiens
ZNF761zinc finger protein 761 isoform a Homo Sapiens
ZNF160PREDICTED: zinc finger protein 160 isoform X1 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.91 1.27 3.77 5.07 7.08 5.23 4.43 6.41 3.44 3.36 3.94 3.49 2.45 1.76 1.8 2.65 3.46 2.67 1.11 1.5 1.78 2.33 1.72 2.1 3.28 4.67 2.77 2.82 2.06 2