XLOC_039937 (gene) - C. hemisphaerica

Overview
NameXLOC_039937
Unique NameXLOC_039937
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_399:75744..79555+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039937 ID=XLOC_039937|Name=XLOC_039937|organism=Clytia hemisphaerica|type=gene|length=3812bp|location=Sequence derived from alignment at scaffold_399:75744..79555+ (Clytia hemisphaerica)
GTGGCATGGAACAACAGCAAATTGTCTGTTTCGAAAGATATGAAAATCGT
TGATAGAGTGCGCTTTTTTAAGGGTAATGAATTTCGATAGATCTTCTAAT
TTCTCTTTTTAAACCCAGGGATTTATCTAAAAAAAGNATGTCGATAGATC
TTATAATTTCTCTTTTGAAACCCAGGGATTcatctaaaaaaagtttttct
attttgaattcAATATAAAAGAAATAAGATTATACGGCCACttgatttat
ttcattttttttagtccaaattcaTATGAgatcaaaccaaaaaaaaaaaa
ctaatttgaaaacCGTGTATTAGGTCAAGCGAACCACGCATGTTTCTCGG
GGCCCATCCATATTTAGTTTgtacacagtgaagggggagGAACCAAATTG
ATTTTTGCGTGAATGCAGTTTCGCAAATTCCTAGTGGTTTCGGCCACTTC
AGATATCTCTGGTTAAAATTTAAATCTACTTACGGAAATATATCGCACGA
ACTAGAAAGAGACCGCTAAAAAAGACTAACTCTTATAATACATCCCTTct
tacagacccactggaaaaattggccgaaataacgtccccggtggaaaatt
acccCCCTCCccaatttttgtctccactaaagacaatcaaataaatattt
actattttttccatccttctgaattttctgacttaaaaacaaagaattga
aatccccagccatcaatccccatcgagtttcagtctgttCTTTTTATTAC
CACTGGCTGAAGAAATCATATCAGGTCCGTGAGAAGGGAGTGTTACAATG
TATTAAAAGGGAGGTTAGCTGGGCGCTATACACCTTATGCAGAGTTCTTC
CTAAAGTATATAGTATAACTGTCTTTATCATTTTCGCAAAATCTGTCGAA
CGAAATTTGTTCGAATTTCTTTCAAACGAAACTTTAATTTTAGGTGATGG
ACCTGCGTGTCAACTAGAAGCAGGCCATCAGAAAGATGGCAATTATTATT
GCTGGTGTTGTGATATGAAGGCCTCTCGTAGCGCTGACCTGGCCTATGTA
TTCGGGTGCACCAGACATTCACTCCAAGATAAAATAAACAGATTAACCAA
AACTAGGTAAGGAATTAAAGAGGGTCAACTTTTAACAGGCTTTTCATGTG
TGCGACCGCGGAAGTAGATCAGAAAAGCTTAATATAAATCAATGGTGATT
TAGGGGGAGGTCTGAAGTGGCAAAGTAATGTTAaacactttctttttatt
ttatcaaaaattttagcTATGGAAAACAATGTGTACATAATAAAAAAATG
TCGATACTTGATGGAATTCCAAAGGTAGCGATCGTGTAAGAATTGAAAAA
ACCAGGCGTCCAAGTCAACAAAGACCAAAATAAAGACGTGGTTTTGAAAC
AGCTGGAAGATATTTTCGCAGGTATacaccatggaggtataaagaaacag
gagaagtatgctattgtaaccaagctcgccctacgattaaaaaagttacg
atgtatgcatgctcataatctcataNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
cgggcgagcttagaatttcttttgatacattttataaaagaaatcaaaag
actttaacgaccaattaccgacacattcaactcctgtttttctttatacc
tctatgtaTACACGATGTTTCAATCCGAAAATGTTGAagcaaaaacatga
aaacagcacaaaacgttgtttttAATTATCGTCTCGGTTTCTTGTTTAGG
AGTCCAACACCTTCCAGCATTACTGTTCGAATCGGGAAAGACAAGCCTTG
AAAAGGTCGGTTTGAATCATACGAAGTACTTGGAAGCGACCCTTTACACA
CCTTCAAAGGTTTGACGACCAATCTTTACCAAGAGATCCCTCGTCACCTT
CAGggcgaagaaaaaaatctttttaaggaCTCGGCGCGAGCATCNCGTAT
TCGGGTGCACCAGACAATCACTCCAAGATAAAATAAACAGATTAACCAAA
ACTAGGTAAGGAATTAAAGAGGGCCAACTTTTAGCAGGCTTTTCATGTGT
GCGAAGTAGACCAGAAAAGCTTAATATAAATCAAATGTGATTTAGGGGGA
GGTTTGAAGTGGCAAAGTAATGTTCaacactttctttttattttatcaaa
aattttagcTATGGAAAACAATGTGTACATAATCAAAAAATGTCGATACT
TGATGGAATTCCAAAGGTAGAGATCGtggaagaattgaaaaaacgtGGCG
TCCAAGTCAACAAAGACCAAAATAAAGACGTGGTTTTGAAACAGCTTGAA
GATATTTTCGCAGGTATACACGATGTTTCAATCCGAAAATGTTGAagcaa
aaacatgaaaacagcACTTTTAATTATCTTCTCGGTTTCTTGTTTAGGAG
TCCAACACCTTCCAGCATTACTGTTCGAATCGGGAAAGACAAGCCTTGAA
AAGGTCGGTTTGGAATCGTACGAAGTACTTGCATGCGACCCTTTACACAC
CTTCAAAGGTTTGACGACCAATCTTTACCAAGAGATCCCTCGTCACCTTC
AGggcgaagaaaaaaatctttttaaggaCTCGGCGCGAGCATCCTTTCAT
GGCAAAGAGGCAAAAAATGGTGGAGACTACAGGCGAAGCCTGGTGGACCT
GACGATTTACTTGGATGGAGAAATGACTGATGCGTACGTCAAACTCATGA
GGCAGCTCGCTGAATTACAAGAAATTGCATATTCCGGTGAAGAAAAGCGT
ACAGCCAAGTCGATTTTACGCTTCCACAACGTGTCATTCTTGCACGCAGA
CTTGATGATTGAGCTTTTCGAAAAGCAGAAATCCATGAGCCGAAGAAAAC
TGTTTGGACAGTACAACCATTCGCTGACCAGTCATGCGCCAATCCAATAT
CGGATTCTGGATTTGGTTTCGGCAAATACTGAGCAAGAGGAGGCTGCATT
CAATTTCATGAAGGAAGTCAGTAAACATGCTTCCAATCACCATCCCGATA
ATATACTGCTGACCTGCTTTCTTCGTATCCAAATCCGAGAAGACTGGCAA
CGTCACTTGGGCATCCTGAAAAAGGAAACAAGAAATGCTATTAGCAAACA
CGGCGATTTGTT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063713TCONS_00063713Clytia hemisphaericatranscript
TCONS_00063714TCONS_00063714Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063713-proteinTCONS_00063713-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_399supercontigscaffold_399:75744..79555 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0.04	0	0	4.61	2.14	2.39	2.13	3.14	4.93	2.53	1.94	2.6	1.55	0	0	0	0.13	0.14	0	0	0	0	0	2.11	2.15	0	0	0	0