XLOC_039846 (gene) - C. hemisphaerica

Overview
NameXLOC_039846
Unique NameXLOC_039846
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_393:3882..6796+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039846 ID=XLOC_039846|Name=XLOC_039846|organism=Clytia hemisphaerica|type=gene|length=2915bp|location=Sequence derived from alignment at scaffold_393:3882..6796+ (Clytia hemisphaerica)
TAGGAAGTCAAGAAAGCTCGTCATCAGCTGCCAGTCCTGCTAATCTTGCC AGTCCTGCCAATCCTGCCAGTCCTGCTAATCTTGCCAGTCCTGCCAATCC TGCCAGTCCTGCTAATCCTGCCAGTCCTGCCAATCCTGCCAGTCGTGCCA GTCCTGCTAATCCTGCCAGTCGTGCCAATCCTGCCAGTCGTGTCAGTCCT GCCAATCCTGCCAGTCGTGCCAGTCAGTCACCCACACAATCGGCAAATCT TGGCACCCCTGTGGACGCTAACAATAATGGTAATAAAAgtcggtgttttt tttcaaaaacaaaatcttttctttCGCACTTTATCAGTTAAAAACTCTGT ATCATTgagggaatttgaatttttgcttcaccATGCATATTCATTTTGAT CAAATAGAATTTCATCTTTAATGCCTTAGAAAATCAAGAAGGCTCGTCAT CAGCAGCTACTCCTGCCAGTCTTGACGCATCTGACGACGCTAGCAACAAT GGCAATAAAAGTAGGTGTTTTGAAACGTTAACGTTTAACTGAGATAAAGT AAAGCAAGAGTGAATTTAATGCAACTCATTGCCAACAGGAAAAGAAGCCT TATTGTCAAGATTTAGCTCTAACAGAATCTAAAGTTCTAATATCCTTCCA GACATGACGTATGACTAATATCTATGTttctactttcattttcaggaaTG TATCAATTGAGCGGAAGACCACAGAGAGGAAAATTTGTGGCCCTTTATAC CGTCGACCATGATAAATACTGGGTTATCAAGGTTTCCAAAACGGCACGTG GTATGGTATGGGGATCGTGGGTAGAGAACTTTGAAAATTGCTGGCATATC ACGGATCAGCTCAAGGAACCAGTTTCCTTTGATAATGTAATTCGGAGGGG CGACATGACCTCGTTTATTTCATTTAAGATGAAAGAATTGCCATCTGGGG GGTTCATAGTCCCGCCAGATGTCCACGATGCCCTTTTAAAGGAAATAAAG AAATTAGATTAAACCAAATTTTATActcttgtttttgtttgttgtaTTTT ACCAATATACCCTTAGTACCCCTAAGGGTACACCTATTtaagaaaattaa gttttctTTAAATTCTGCTACTGTTGTTGTGTCAGCGCACCTccgtattt ttctttttctttttctttgattatttttaactATTAACTTAAACCCTGAT TgcatttttttcaccttttctgATACTGAAGAAATCATAAACCTTCATGT GGtttatttatttaatatttttttttcataaacagTTATGTATACAGTGA ATGCATACTATGTAtatgaatttcttttcatttcagattgttaatgataa aaaatataaaaaaatatgcagAGGTCTGGAAAATACAAGCAAGGTGGTCT ATTGGTGAGTACATTTATTAGTAAATTGTCAACAATTTAATTGTCAGTAG AATTTCAAGTGCTGAAAGCTTTCGATAGAGTTCGAATTATAGCCAGTCTA CTTATCGGTTATGGTTTTTTATTAGTCTCTAAAAGATTGATTTCCAGGAT CCTCTACCTTGATTTTCTTAGTGCTAAATAAAACTTAATAAAGTAGCTAG TTTGAAGGTTTCATACCTCTTCTAAACCTATCGCTGCAGAATTGACTTTT TTACAGATAAAAtggaaaatgttttgatttttttgttattcttttgcAGA TTCGTAGGACCAACCAAAGTGGAAAATGCCGTGTCAAAGGGTGTAGATTT TATCATAAATTTCTCAAGAATTTAAAACGGCATGTTGAGCACAGTCATAA GATGACGTTGGCAGAACATAGAAAATTGCCCCCGTCACTGCTCGCTGTAT CCGTAAAGAAAAATGAGAGTAAAGGTTATATGAGATATAGAGTAACAGAA CCTTGTCAGATTAAAAGATGCAAAAGGTTCATGCAGCCTTTTAATGATCT TACTCGACACTTAAGGGTTTCGCATAACATGACTAGGAAAAGCTATGATA TCAAAAGGTAATTCTCAATAAGAACCTGTGAACTAAGCTTTATTTTCGAG ATTTTCATGctcaaatgttcttaaacttttattaaagtccaaaaataatt caaactaAGTTGAAAAGATTTAACAAGTCTTTCTACCGATTTCAGTTCTT TGTCATATATTTCATATTCTTTCTTTAatatatgtttttcttttcaggaA AGATGACATTTCAAAAGAACACGAAGTAATCAGCGTTTTATCACTAGGTG ATTTTTCTATATACTTATTTGTAAATACATGATAGGAGCCGTTACAACCT TACAGTGAAAAGGGGTCTATATATAGGCTGTGCATGAAATAGAATCGTCA AAAGCACTTTACATCTACATTATTTAAATTGAATACATTGCAATGTTCTA AAttcaataacatttttaacTTTAGAGGTCTCACTTTCCATCTTGATACA TAATAGGCAAGAAGTTTGTCCAATACACCTAACAACCTCGAAACTACGAA AGGATTTGGTGGGAGTATAAGGGTGACGGTTATCGTAAATTTTTAAAGTC TGCAGGCCTTTTTCACATTACTTTTGGCGTCAGTCGTCACCCCGAAGCTC GCACCTAATCTTCTTGTATTGAAGAACCTTCCTAAAATATTCAACATTAT TTTAGCAACGCGTAACTTGCAGTTTATTCTTCATGTCAAATTTTTAAAGG TGTAAGGTATGTTTGAAATGGTTCAAAATTTATTTACTTTCAGACAAGCG TGAAACAGTCAAATCAGAACCTATGACAAATGTCGAAGTAAACCTTGAAC CGTCAGAACCAGACGAAACCTCGGAACCCGAATCAGATGAACGAAGTGTC CTAGATTCAGATGTTCCTCCATCTTCTCCATTCAACcctgatgatttttt ttcactgaataaaaa
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063557TCONS_00063557Clytia hemisphaericatranscript
TCONS_00063558TCONS_00063558Clytia hemisphaericatranscript
TCONS_00063559TCONS_00063559Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063559-proteinTCONS_00063559-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_393supercontigscaffold_393:3882..6796 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
1.54 1.79 0.59 1.05 15.22 16.28 18.99 24.24 15.77 17.59 12.04 13.24 7.67 8.6 4.42 8.06 9.31 9.11 4.83 6.46 7.29 7.79 4.28 3.8 1.65 5.69 5.31 4 3.91 3.15