XLOC_039828 (gene) - C. hemisphaerica

Overview
NameXLOC_039828
Unique NameXLOC_039828
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_392:114951..119755-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039828 ID=XLOC_039828|Name=XLOC_039828|organism=Clytia hemisphaerica|type=gene|length=4805bp|location=Sequence derived from alignment at scaffold_392:114951..119755- (Clytia hemisphaerica)
TATCTATTATGAATGAGAATACTAATACTTAGAATTGTATGCCTGGTAAA TTTTAGAAGTTTTAGCTACTTGCTAATACTTTATTATGTTGAATATAAAA TTGGCCCAGCATCATGCTTACATTGTCGCTGTCTGTCTTGCTGTATGAAC GTTTTTGAAGAAGCAGTGCTTTGTCAATTCAAGTTCGTTTTGGAAAAAAA GTTGAAAAAATCAGTACACAATACAACAAGCAATATATGTATTTGTGGTC AGGTAGCTCAGTTAGTAGAGCACTTGTCTTACCATCCAAGGTTTGTGAAT TCGATCACCGCGAACTTTGACTTCTATTATGAAGTGTATATGCATTGAGA ACAAACATTTAACTATTGCTGTATCGCTGGGTCTTCATGCCGCTTCAACT TCTTGCTTTCTTTACAAGAGCAATTGTGCATCACCTGGTTTCTATTTTGG TATTTCATTTGTTTTTTTTCTTAGTTTAAAAGGTTGAAATCTAAAGTGAC AGACATGGCTTGGCTGGTTTCTGATAAATGATTTTATAATGGATAGTTTT GTGGACCATATTAAGCACAGTTTTCTTCAAAATGTAAGTATTTTTCTCAT CATTGTCTTTTTTTTATTTGTTTTATAATAAAAAGCGAAAGTATTTTTTA AACATTTTCTATATGTTTTTCTTTAAGTATACTGTTATACTTAAAAGAGA CTTATTAATGTTGCCTTGTGGCATGTGCTTTTCTCAGAATTGGACCATGA GAATTTTTCTGGACAAAAAACGGGTTTTTTGGACCTTTCAAACTGGACTG TGTAAAATCAGGTTATTGCATTTTGTTCGGATATATTATAAAAAGTAAAT CATAAGGTAAATGATGACTGAGGTAGATTCACTTTCTTATACAGAATTTT ATACGTAATTTTATTTTCAATCTCTTTTTTAATTTGATTTTTGGACCTAC CCTGGTAGGTAGAGGTCCTTTAAATTAACTGATGTTCGTCCGTCCTGTTC GTCTGTTACCAGCTTTTCTCAGGATTGGCTCATTAGTTTTTTCTGATTTT TTGCACAGTGATGCAAAATGGTGATTCCCAAAAAGTGACGGGAGCCAGAG GAATTTTTTTTGGCCGTAAAAATTTCCTTATGTCATTTTTAGGGAAAAAG AGCATTTCTCACGATTGGATTGGTATTTTTTTCTTATTTTTTGCATAGCG ATATAGAATCGTACAGTAATATTTAATTATGGTGGAGCCCAGTTTTCAAA AAAATAATTTTTTGGGCAAATTTGGGCCAAAAAGTTCACACCTTTTATCG TCAATAGGGAAATCATGCTAAGATACCCCAGTATCTACGACTGTAAGTCA TACGACTTTAACTATACTTCACAGGTCGATATTAATTTGAGCTGTGATAC TCACGGTAATGTATTCAAGCTGCTCACTACACTTTTTTACTCTCTTGCTA TTGTGTCCTATTTTTATCTGATTCTCATCATCAGGTAGGTCCATTCAGCA TGTTGCTTGTCTTTATAAACATACCACCTAAAACCATCAGCATTATTCGT GAATGATTCAATCATTTATTCTGATTTGGAATTTAATGTTTTTGTTGGCT AACCANCAGGGGGGGGCACGCAGTTACTACAAGACAGTATGACACTTACT ACCGTGGTGGTACTGTATTCAGAAGTTATGAAAACAGTTACTACNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGGGTGGTGC CAAACACTAAAACTAGCACTTTTGGTGTAGTAAGTGCTTATATTTTAATT CTTTTTAAAGAACTTTCAAAATTTTTCACAAAAAATGAATTTTTTTGTGA AAAAATTCTTTGTTAAAAAAAATATTTTTGTTATAAATGGACGAAAAAAA TTTTTGATTCACTGAAATTTTTCTCAGACCCAACTTTGAAATTATGCTTT CCCTAATTATCATTAAAATGTTCTCAACAGCTGTTAACCAAGTAAATTAA AAGAAAATCTAGCACAAAAATGGCTTTAGGTTGAAAAATAATTGCAATTT AGCGTAATTTCGAGCATATTTTTGATGATATCACTCAAAAACAGGGGTGG TACCTGGAAATCTTTTCTGAAAACAGTTACTACCAAGGTGTAGTAACTGC AAAGGGTGGTGGTCCTGAAAAAAAGTGTTGAAAAAGCACTTACTACACAT CATGTCTTGTAGTAACTGCGTGCCCCCCCCCTGTGCTATTTGTCCTATTT TTATCTGATTCTCATCATCAGGTAGGTCCATTCAGCATGTTGCTTGTCTT TATAAACATACCACCTAAAACCATCAGCATTATTCGTGAATGATTCAATC ATTTATTCTGATTTGGAATTTAATGTTTTTGTTGGTTAACCATGGTAAGG TCCATAAAGGATCATTTTTTTAAGATTAAATTTATGTAGCTCTGTTTATA GTTTAATGAGATTAAATTTGTGTTGCTCCTCAGAACTATGTGGTTGCTGG TTTGTCAAGCTTGGTTCTCCTTGTCATTACATTGCTGGTTTTTTGTCGTA AAAAGAATGACTCAGGTACGCTTATTACTTTCATGCATTTTAGCCCCTTA GCTCGTTTTATATTCATGCCTTTCTCTCTTTCGTTTTATACCTTATTGAG TTATTTTTGGAGAATTTGACCTTTGGATTTTTGGCCAGTTCTATACTCCC TTTGATTTTCAGTTACATTTGATTTGAAAGACCTCCCACAATTTTTTTCC CAAGAAATTTTACTGTCCCGACCCCCGGATTTCAAGGTTTTTCGAGGGAA TCATCATGGACAAAGAATATATGACCTCTTTGGTATTCNTGTCCCGACCC CCGGATTTCAAGGCTTTTTGAGGGAATCATCATGGACAAAGAATATATGA CCTCTTTGGTATTCGGGGATATACTTTTGGAATATCCCATAAAAATACCT CAACAGTAACTTGAAGTGTGTAATAATTTAAATTATAATGCATAACAATA AAATTAATTTCTAATTTTATAATTTGAAGACATGGTTACGTACAAGACAC AAATTTCATTGTNAAAATTACTTTCTAATTTTATAATTTGAAGACATGGT TACGTACAAGACACAAATTTCATTGTTTCAGTCATAAAAACAATAACTAA GCATCTAAAAATTACATTGTAGTGAAAAAAGGATCAAGAACTTTGACCAG CTAAAACAATCGTAAATTTGTTAAAAGATTACCTTACCATAGCCATTACA GGTTCTTACAGGTTCTTAAACCAACATTTCAAGAGGAAACTTCAGATTTT ATGGCATAGAAGGTGAATTAATGAAATGATTAAAATTAAAGCTGTGAAAA GTCATTTTCAAGATTTTATTTTATTTTTCAGTTAAGAAACTTTTTTTTTT AGAAACAAATTTATTGTTGCCTGCAGTTCTCGTTCTTAATTTAATTTAAT TCATACTCATTATTACAGTGGGACCACTGGGGGAGACAATAGCTGAGCTG CCTAAAAGCTCATTCGGTATTCCATGGCAAACCACTTAAAATACTAGCTA TTATTATTAGTATTGTTATTATATACGCGAATATAACAGAAATCTGATAA TTCGAGAATGATGCGTTTGTGACGACAGTGAAAAAGGTACGATTCTCTCA AAATTCAAAGAAGAAGTTGAGAAAGTTATTTCTGGCAAATTTCAAAATAT GAAGATGAAAAATAAAGAAGAAGTCATTGATTTTAAAAAATTCACTAATT TTCAGCATTGATTTTAGCAGTGGATCTTCATGGAAAAAACGGACCCAGCA ATTTTGTTTTTTGTTCCTACAAGTGGAAATTTTATGTTAACGTCATAAAA TGTTATTTTCTTCCTGGAATTTAGTCTTTTGATGAAGAACATTTTCTACC AATTTTCATGGCCACAGCTCTCCTAGATCAAAAATAATCGTGGGTGGTAT GCTAATAAAATACTTCCTGGAGCTATAAAAATCATTTGGAGTTAAAAAAG GTTGAATATGTTAGCCTTAAAACGCTAGCCGTTCAAAAGTGATCATTGGC CAAAGTTTGCTAACTGTTGCCCTCCATACTCGTAAACTGTAAGATTTGAT TTGGTTTAATCTCTTTTAAGGTTTACGACTGATCGTAAAAAAAGCGTATT TAAAATTTGGGTATTTTGCATATCACAAATATTTTAAAGCCTCCTGATTT TATCTAAATATGATTATTTCCCTGAAAATATATATTGCATCCGAAGTTAT AGCCTCTAAAAGCTAGCACTTGGAGTTGAAAAAACTCTGTTTTGGTGTTT ATCCACCTAAATGGGCCATTTTCTGGCACGTTTTTATTTCAATACAATAG TTCTGTGCGAAAAGTAATTATATAAATAACTAAAATCCTTGTGTGAAAAC GGCTACAGTTCATCTTCATTTTTCGAAAAAAATCTGAACTGTATAATATA TTATTTCAGAATTGAAACTTTTGTTGAAAAATAGCAATCAAATCATAAAT TAGTGAACACTTAAAGCGAATGGACTTGATTTAATATTAAGGTATATTTC GATTTTCGAATGACTTTCTAGCATCGAGTGGAAAATCCAATCCTGGCATG GTGTTTCCGCCTACAGAGTTTTTCAGACAAAAACCAAGGTTTCGGAGAAG AGACAAAGTCAGATTTTACACTACCAAAATGCTTAGGAAGGTATGTTTCA ACTTGTCTTTCTTGCTCAAATCAGAAGAAAGGAACAGAAAAAGATCGGGT TTTTCTTGAACAGCAACCATTTAATGGATCTTCTCGATACTGAAAACCGA TCAGC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063538TCONS_00063538Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063538-proteinTCONS_00063538-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_392supercontigscaffold_392:114951..119755 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
3.14 3.06 2.21 2.73 6.1 4.49 4.63 5.38 2.47 4.19 5.21 4.07 4.04 4.23 2.8 5.11 3.47 3.76 1.69 3.37 3.68 3.42 2 3.38 7.18 7.34 2.12 1.88 2.63 3.55