XLOC_039826 (gene) - C. hemisphaerica

Overview
NameXLOC_039826
Unique NameXLOC_039826
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_392:81749..90838-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039826 ID=XLOC_039826|Name=XLOC_039826|organism=Clytia hemisphaerica|type=gene|length=9090bp|location=Sequence derived from alignment at scaffold_392:81749..90838- (Clytia hemisphaerica)
GCTGATTTTCCTTATTCTTTTCTAAGGCGGACATCATCTTAATTGTTGGA TGTGGTGACCAAGACCCAGCTGTTGGAAAGGTTTATTCTTATTTGAGTCT TCCATTCTTTCTAACGTAATCTGAAGTTGGCTTTTTCTACTGGTCGCCTT CAAAAAGAAAACGTTTGTCGACATTATTATGGGCTTTTCAAATTCAATTC TACGAATCAAAATTTTAGCCTCATGAAGAAATTTGTCATAGCTATGTGAA TATGTAATTCCCAGAAGTCATAATTTGGCTTGGCAAATGGCGAATTCCGC CGGTCGAAGAACTCGAAACGAAACTTGAACTCACCGGTATCCTCTATTCG CTGGCTGATGAAATCTCCTGTAATCAACTCTTTTAAATGGGTTTATACAG TTAGATTAAGTGCGTTTATAAACTTTGTTTCGAATCATGAATTCTGAAAA ATTGCCTGCGTCGCTTGACTTTTTCGAAATAAAGTATAAACTTTATATAC ATTTACTTTTCTATTGTTTGCAGAGTTTACCATACTCCTCAGTACTCATT TGTAATTTTCTGTATTTTCACTTTCTTATCCCGTTTTTCTAATGAGGAAA ATAACAGACTTGATGCACAATTATTTTCTGCTAAAATATTAAAGCACACA AATACACTCAATCATAGAGTGCACAAGCGTCCATCCCGTAGAAATTTTCG GGGGAAGGGCTAATAAAAATAGCTCCAGCTAAATTTCAAGAATGAAGCCC CCCCCCCGCCTCCCCGAAACGGAAAATTGTGCTTAAAAGTGGCAAAAGCC AAAGTGATGCATACTTACNCACTTTTCTGTTGTTTGCAGAGTTTACCATA CTCCTCAGTACTCATTTGTAATTTTCTGTATTTTCACTTTGCTTATCCCG TTTTTCTAATGAGGAAAATAACTATTTTCTGCTAAAGTATTAAAGCACAC AAATACACTCAATCATAGAGTGCACAAGCGTCCATCCCGTAGAAATTTTC GGGGGAAGGGCTAATAAAAATAGCTCCAGCTAAATTTCAAGAATGAAGCC CCCCCCCCGCCTCCCCGAAACGGAAAATTGTGCTTAAAAGTGGCAAAAGC CAAAGTGATGCATACTTACTTAGAATACTTAGAAGTGTTCGACGCTCTGT GGCTTCCACGCATCTCGTCGAGACCATTGGCATGTGGCCGATACTGTTTG ATTCAGCACGCCTCAAGATTTTGTAGCCTGAAACAAGAGGTTAATTCGAA ACAGTACGCAAATAACGATCTGCATTAAAGTTGTTTTTTTTACATTTTGT AAGATTCCTCCAATCTTTGGGTAAGGAATTGAACAATTTTGGTCGCTACT TACGAGGTGTTGAAAGGGGCTTCTCTTTATCAGGGGAATTAAACACTTCC TTCCTTGTCTAAATTAGAAATCGGTAAAATAGATTTTTCAAAATATTTGA AATTTTTGAATTATCTGCTAAGCCCCCAGTTCAATTACTCTATTCTCTAA ACATAGCCCCCTTATCGAGGCAGCTCCAAGAATTATCAAACGCGAAAATA ATAATTAGCTCCCGCTAAGCTCAGGGGGGTGCATACTAGTCAGATGTTGA TGGTTGCGTACGAGAGAAACTATTTTCGCGTTTGATAATTTCTCAAGAAA ATATGCTATAATAACCACTTTTACAAAAGTACCCTTTTTGACTTCTTCAT AAACCTATACATTTCTCTGGTATGTCTATCTTCCGACGCCACTCCACGAG ATTGAATCGATTTCCCATTCTATCGCACCTCTTCCTAATTCTTCCGTCTC AGACGCTTGTCCATCTCATTGATGCTTAAAAAGACTCCTTTTGTCTGAAA GACTTGAAAGAAAATGTTAAATATTAGGGATTATTTGTTTTGAGAAGTCT AATTTCTGTCCGAGAAGAAAAGCTAAAGGAGTGAATCTAAGTGAATTTTT TGTTTTGATTTATAGTTGGAATCACAGCTGGAGAATATGACGACCATCCG TGCGCAGAAAGATCTTATTCTTTTGTACAACGACGAAACATTCAAACAAC CTACCGAAACAATCGATTGGTTAAATGCCAGACGTTGGATTTCTGCGCAT CATCACGTATTTGTTCTTCTCTCTTTTTACCCTCCATATAATTGAATGAT AAGTCGCATTAACATCCTTTATTCGGGTAATGTCGTATTTGCTACAATCC GTGCCATAATATATTTGCACTTTTGGCTAATCTACCATTTTTCGAAAATT GAAGTTCGAGCGAGAATGTCAATTTTAGGCCCTCAACTTGATTTCATCGA TTATTTCGATCTGGGAGGGATTTATTGGTTNTAGTTTTCTAAGTTTATAA TTAATTCCCAATCGACTTTAGCAAAGATCTGCTACGTTGTAACAAAAATC TTGTCGATTATTCAAATTTTGTGTATTTGACCAAATTAAAATGATTGAGC CACTCACTTACTTGTGATACTTCTCATTTGATCGCAGGATGTCAGATTTT GCTCGATTGGCTCGTGTGTTGACTGGAACGGCAGTTGGCCTTGTCTTGGG TGGCGGAGGTGCCAGGTAGAGTNGTCTACCCTTCGAACCTACTTTAGAGC ACTTACAAATCGATTGTGGTTTTGTGCCAAGTATTTTGTCCCTGATTGTA CCTTTAGGGGTTTGAGACATTAAGAAAAAATGAGATGTATCGAAAAGTTA CTTTGTATTCCGTTTTAGGTTCGATGCCCAAGAAGAGTCTTCAAAAGAAA ACTATTGTCAGCCCGTGTAAGTGATCCATTATTCGATTGAAAATCATAAC TCGAATGTTCTTTGAGCTTTCTTTTGTTTGAGTGATTTCTTATTTTCTTC ATCTTTACTATATTTTAGTACCATGACGACCCAAACTATGAGGGACCAGA TAGGTATAATTTTTATCGCACTTAGATTTAAAGAAAGATGATCTTTGAAG TTTTTTCTTCGTTTCTAGTTTTCTAAGTTTATAATTAATTCCCAATCGAC TTTAGCAAAGATCTGCTACGTTGTAACAAAAATCTTGTCGATTATTCAAA TTTTGTGTATTTGACCAAATTAAAATGATTGAGCCACTCACTTACTTGTG ATACTTCTCATTTGATCGCAGGATGTCAGATTTTGCTCGATTGGCTCGTG TGTTGACTGGAACGGCAGTTGGCCTTGTCTTGGGTGGCGGAGGTGCCAGG TAGAGTTGAACCTTGTAATCAACTGATTTCTTTCAAAAAAGCCAAAAAAA GCTGAGGGTTAAACCTCAAACCTTCAACGTATGCCTACTATATACTTAAA TGAATTTGAATTTTTCAGAAAACTTAGAAATAGTTAATGCATTTTTTCGA GAATACTTCTGACACTCCGTTCAAATTCAAAAAACTCCCTAATCGTCCCA ATATAAACTTCATAAAAACTTTCCAGCATAACATCCGAGGGTAGTATTTT TGTCAACAAAATATGTACGTTGCAATACCTGTTTATTTGACAAAGAACCC CTGTTTTGCCTAAACTTGTTACCCCTTCGTATATTACCCCTTCCATAATA TAGGCGGGAGTGCTAACTTCATCGGAAAGTTTGAAACTTATTTAAAGTTG AGCAGATTTCTCTACAGCTTGCTCTTTAGGAAATACCCACTGCCATTTTG AAATAATAACTGTCCGCTTCATTTTCTTTTGTTACAGAGGTATTTCACAT GTTGGTATCATCAAAAGAATGTTAGAAGCAGGTCAGTACCTACGTTATCT CTTCCTTTGCAAAGGCTACCTTTGGTAACCTTTCACCTAAAATTTTTGAA TATTTTCTGTCAGTCCGTAGCGCCGGACGCTATTTACAGAAAAAAAAGAT TCCCAATACATTAATTGGTTTCCTTTCTGAATATCGGGGAAATGTAGCGT GATTTTTTGTTTTATTTAACTAATTTTCATGGTGTCGGCTTTTGAAACTA AATAAACCAGCTGCGCTGGAAGGTCGCCTAAATGGAATAGCTTTTTAAAG AGCTTAAAAGTTTGAAAAAAGTATACGACAAAAAGCTTAACAGTGTAACA CGTGATTTGCGAATGTGAAAAATCTCGCATTAATGTCAAAATGACTGAAG TTGATTTTAAGTTAATGTTAGAAAAGATAAAATGAGATTGGAATCAACCT GAAAAATATTCTTCAGAAACAAATACGTAATATAATATTATTTTTGTCAT CCCTAAAATCTTAAAAGTTTTCAGAAAGTTATCATTTTTTAAAAGTGACA TTAGGGATATAGGTGAAAATAGCCTAAATTTTTTCTGAAGAGATAAAAAA ACCGTTCGAGTTAAGGACACATTCAAGTTATAGGGTTTGAGTTTGAAGAC GGTTACTTAATCATATCATGTTTAACTTATATCAATGAATGTTTCTTGTT TGTACAATAAAAAATTGTTGCTAGAAAGTTTTAATAAATTATTATAGTAA ATCTAATAATACAGTTGAAGTAATCTTTTAACAAAAGTAAAAAATTTGGA GGGGATTTAATATGGCTGCGAGCTTGAAAAATTAAATTTGACGGGAATTT ATTTGCCTTAAAATAGATAACATTTGGGGGGAGAAAACAATAATCTAAAT TTGGCGTCGAATGGCAGTAAAAGTTACATTTGGATGATTTTGGCCCAATC CACCAAATTAAATTCCCGCTAAATTTAATTTTCAAGTTAACCACCAAATT AAAAGGACCCTCCAGGCACACTGGAAACTTCCGGAGTTTTACAGACCAGC TAAAAAAACACTATTTTTATCTCTGGAAAGCTTAGGAGCTCTTCCCGGCT GGAGCAAAGTGATTCTTAACACAGCTCCAGAGTTCCGGTGTAGATCAATT GCCGAAATACGAGAAAAACGGCACTTTTTGCTCCGGACGTTTCTGGAGCG TCGGGAGGGTCCTAAATTAAATTCCCTTTGAAAAAACTTTTTCGGCCATC CGCCAAATTAAATTCCCACCAAAATTTCTCCTTTTAATGTAGGTGCAATG TCACATTGTGTAATTAAAACTCCAGCAAATATCTTGATAACTCCATGTTT CAATGGATGCAAGGAGAACAACAATAATAATCAAAAGGGCCATTCCAGAG AAAGGATACGTAACGTCACTCTCATTTTTACTAGATGCCAGTGGGGAGAC AGTTGTTCAGCCGGGCATAAACTCCAATAATTGCAGTTGACAACTGGACA ATATCTTGAAATGGCCCAAAAAGGAGCCTGAAATAAAAGAAATAAACTGG CTGCCAAACAGCCGACAGTTGTATGTTTGTTCAAGAAATTTTAAGTCAAT ACTTGCAATGGTTACACAAAATTACTCGTCTTGGAACGGTGAATCATCAA TCAAATCTTGCTTAAGCGTTTAGGTGATATATAAATGTTCTTTTGCTTCA CTTCAAATCTGCTAATTGTAGCTAAGAAATTCATGGTATGCAATTGATAC ATTGGTTAGGTTGCCATATGCAGTGAGTGATCTTGGTTGGGACATGCTAT CAACTGTTATCATAGATTTCGAGTAATTGAAACAATAATAAACTTATTCT TATCTAATCTATCTTATTTTTCTTGTCAACACAAACACATCCATCTTCCA AAACCAAATGTTTAAACCTCAAAAGTGATTCTAGTGAAAGGAGGTTTGTT TTCAACAACATCACGAGTGTGGTAGTTTGAATGGAATAATATCAATGAAG AACTATAAATTTCAATTTCAATTTTGAAGAATCATTATTGTAGTTGTAGA TTTAAAATCTACATCAAGAATTATCTGCTGCTTGCACTTGTAGTAGAAAC TTTCGACAACTTTCACGAGGCTTTTAATTATCTCCGTTATTTAGATTTCA TAAAACAAGTGTGCTAACTACTACGGAGCTAATTAGAATCTACACACTGC AAATACTGTCTGATAAGTTTGCGTGGCGCAATATAACAGAGATAAAACGG CTTATGCAAGAATTTACGCGGGAAATAATTTCCCGATTTACCGAACATTT ACCGAATCGGGCGACCAAACTTTCACAAAAGAGTCGTATGGAGAAAACAC CGAATTTAAAGGTCTCCTTCACTTGCGTGAGGCGACCAAAAAATGTAAAG GGAAATCTGTATTTACACTTGTCTATCAAAGGTAACGAATTGCTCAATCG ATTAATAATCAATTTTATCGGCGATCCAAAAAATATCAGTAATCTGATTG GTTAAAAAGAGTACAATATATCTTGTATTTTACATGTAAAAATATAAATT GACGAAAAGATGTTGTTGCATTGTAGCGGTAGCAGCAATCTAACGTCACT TTTCTACAAGAGTGCCCAGCGCTTTTTTCCAACAAGAAATTATATTATAT TATATTATATTATATTAGAGTTGTCATGCAGCAAAGGAAGGAATGAGCAA ATGAAAGTGGATGCTTAAAGGGCATCATCTCCTAACATTGCTTACACAGC AACTTTTGTTCTCTTTTTTCCGCGCCCATGCGAGTGCAAAAAAAAATTAG AAATTCTACTGTTAATTCCGCCGTGTCACCATTAAGGCACGTTCTTTCTA TATCACCAAAAGAAATATCTATTAAAGGTCCTCTTTTACTCTAAAAGCTT TAAATGTTTTTGTGGATGAGTACTTAATGTATTAATTAATCCCATCTCTG AATCCCAGTCAAGAAACTTTAAAGGTTTCATTATTTGATTAAGTGGCCAG GGGATAGCTTAAGATATGAAATGCATTTAAAAGTTTTTTCAGTTACTTGA TTTTGATTTAGCCCGCCCTTTTTGGCTAGCTTCTCTGTTATGGGCTATTG TACAATTTTTGGACCTACCTAAGGTAGTCCTTTAAATTAACCCTTGTCCG TTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTTCGTCTGTTACCAGCTT TTCTCGGGATCAGCTCATTAGTTTTTTCTAATTTTTTGCACAATGATGCA AAATGGCAATGCCCAAAATGTGACGGAGCCCGATTTTCGAAAAAAAAAAT TTTTCCGGCCGAAAATTGCGGAAATATGCCGAAAAAACTGATTTTTCGGC ATTTTCTCGAGATTTCATCATTAGTTTTTTCAGATTTTTTGCTCAAAGAT GCGTATTAACAATGCCCAAAACATGGCCTAGTCCGATTCTTNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNAGAAAAAATTTTTTCCGGCCGAAAATGCCGGAAATCGCCG TTTTTCTGGATTTTCATTGGACTTTTTCCATATAATTGGTTGTTTTTCAT TCAAAAACATTATCAATAGCAATGCCCACCATCAAGCATGTTTCAATTTT CAATAAAATTGATTTTTGAAGCCGGAACTTTCTAAAAATCGCTGGAACAG CCGATNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTTT CGCCGGAAAAACTGTATTTCTTGAATTTCTTGAGCTGTACTTTATATTTT TTCATGAAATTTTGCACACTGATGCAAAATGTCAATACCTAAATTGTGAT CGAGCCCGATTTTCGAAAATAATTCAATTTCGGCTGAAAATGCCTGAAAT ATGCCGGAAAAACTGGTTATTTGGCATTTTCTCGAGATTTTATCATTAGT TTTTGCTGATTTTTTGCTCAAAGATGCGTATTTGCAATGCTCAAAACATG GCCGAGTTCGATTTTTGAGAAATTGCAGATTTTCATTGGATTTTTTCCTT GTATTTCTATGTTTTTCACACAAAAACATTATTGATAACAATGCTCACCA TCAAGCATGATTTAATTGTCAATAAAACTGATTTTTGCAACCACAACTTC CTATTTATCATTTCCCTACAACCCTTCCCTCTCCCCCCATCAACAATCAA TGATGAATTTATTGCGTTGTGTATTTTCGCTAAACGCTATATTTTCTGAC TGATTTTTTTCATTTTTCTTTTCGCATTGCTTTCTAACTTTCATCATCAG GTAGGTCCATTCAGCGTGTTGCTTGTTAATCCTTCAATTGAAAATCCTTC AACTATTAAACCCTTTCAACATCGTAACTGACTTCCCATTCTCGGTTAGG TTTACTTTTATTTCGATTGCGCTTAAAAATCTCAACTGAATTTTTTAATG ATAATTGGTCTTTCTACTTTGTGTTTAAGGTCCCACTATGATTGGCAGTA GAACGACAACAAGTTGTTATTTTTTAATAAAGTTTGAATTAGAATCCGAT TTTTTGAGTAGAGTCACAATCAAAAAGAAAAATTGAAAAAAATGGGAAGA TCAATTACTTTCAACATTGTGCTATAATTTCCTTTTTCTCTGTTCACGTT CAGGANAGATCAATTACTTTCAAGATTGTGCTATAATTTCCTTTTTCTCT GTTCACGTTCAGGAATACCGATTGACCGTGTGGGAGGTACGAGCATGGGT GCCTTTATTGGTGCTATTTATGCAGAGCATGGATCTATTGTGAGAACCAC TCAACGTGCCAGAGAGGGCTGTTTGGTAAGCTTTTTTTATACCGTTACTT TTAACCACCTGGGAAGCTAGCTTTCTCTTTCTTCTGATGTCACCTTTTTT TTTATCATTTTGCATTGTGTTTTCAGAAAATGGCATCAATGTGGAGGAAA CTGCTCGATATGACTTACCCTTACACCTCGCTTTTTACCGGTAAGTAAGT TTCATACTTGCGCTAGGGGCTTGTCTNATCATTTTGCATTTTGTTTTCAG AAAATGGCATCAATGTGGAGGAAACTGCTCGATATGACTTACCCTTACAC CTCGCTTTTTACCGGTAAGTAAGTGTCATACTTGCGCTAGGGGCTTGTCT TTGGTACGATTGTGTTTTGACCTAGGCTACGTCATATCTTCCTTCGTTTC GAGCGTAAAACTCCTACTCTTCGGGCTGTGAGCACTGCTC
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063534TCONS_00063534Clytia hemisphaericatranscript
TCONS_00063533TCONS_00063533Clytia hemisphaericatranscript
TCONS_00063532TCONS_00063532Clytia hemisphaericatranscript
TCONS_00063531TCONS_00063531Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063532-proteinTCONS_00063532-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_392supercontigscaffold_392:81749..90838 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
17.74 15.22 9.3 8.27 29.89 17.67 20.75 32 18.05 26.5 23.84 18.9 16.69 24.51 17.61 25.01 32.17 18.22 11.6 26.32 26.83 24.82 17.98 21.28 46.39 46.71 27.97 25.4 24.86 20.46