XLOC_039824 (gene) - C. hemisphaerica

Overview
NameXLOC_039824
Unique NameXLOC_039824
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_392:50002..60124-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039824 ID=XLOC_039824|Name=XLOC_039824|organism=Clytia hemisphaerica|type=gene|length=10123bp|location=Sequence derived from alignment at scaffold_392:50002..60124- (Clytia hemisphaerica)
ATTTTCTTCAGTGGACACCCAGCTTAATTTTATGTTGTTTCTTCATTCAG
TAGATGAATATGAAAAAATGAAAGTCAATGAAGGAACTGAGGACGAGTTT
ACTGCTCATGGCTACCATAGAAACAACTTGCGTACCATTTTGTTCTGGTT
GCTATGTATTATCACAGGTGGTATTGTTTGGATTGTTTTAAGATGGTACC
CAGAGAAGAGAGCTCGTTTTGTGAACGACCCATGTAGTCTTTCTGAGGCG
CATTGTGTTACCATTTATGCATTGGACGGTCAAAAGTATGTGGAGGAGGT
AAAGGAAGTTTCTGTTCCGCTTGCTGAAGATCAGTCCACCGTTCACTTCG
AATCTGATATTCTCAAGGATTTAAAAATGCGATATTTTGTACATATGTTT
TTAAGATATCGTATTTGCTGCGATGATACCGTGCACGAGATTACAGGCCA
TGACCAAATGTTATCCAAATCTAAAATTGATGAGCTGGCTTCTCAAGGGG
TGTCGCCAACAACGACCAATTTCCGTAAAGCGATTCACGGCTCCAATCAC
ATTGAAGTCCCGGTACGATCGTTTTTCGTGTATTGTGCACAAGAAGCAGC
GAATCCTTTCTACGTGTTCCAGGTATTTAGTTTCACGCTTTGGTTCATCG
AAGGCTACATTTACTACCCATGTGTCATCATTTTGATCTCGCTTACTTCC
ATCGTTGCAACGGCTTACCAAACACTCAAACAAATGCAAAAACTCCACAA
AATGGTTGGCCAACCATGTAACGTACAATGCTTAAACAATGTAGGTGAGC
AAGTGACAAAATGTTCAATAGATCTGGTTCCTGGTGATATTCTGCTTATC
CCAAATGACGGTATGGACATGCCGTGTGATTCAATTCTCCTCGAAGGTGC
TTGTGTCGTTAATGAAAGCTCTTTAACCGGTGAAAGTTTCCCTGTCTCCA
AAAAATCCTTTGAAATGGAAACAGATGTCACTTATCATCTTGAAGAACAT
AAACTATACACGTTACAGTATGGGACGCATGTCTTACAGGCCAGGTCAAG
TGGAAGATATGTCCGTAGCTTAGTTGTACGAACAAACTTTTGTACTCTCA
AAGGACGCCTCATTCGTCGTATCATCCATCCAAAGGCGCTAAAATTTCAA
GCTTACAGAGAAGCTTTCCGTTTCCTTGGTTTTCTCGGTTTTCTTGGAAT
CATAGGGATGATCTTTTCCTTTGTTGTTTTGGGGAGACAAGGCCAAATCA
CCATCGGTGAACTGGTAGTGAACAGTCTTGACGTCATCACTATCATTGTG
CCACCGGGATTACCAGCCTGTTTATCAGTTGGTATCATCTTCGCCTTGAA
CAAACTGAAAGCACATGATATCTTCTGTATCGATTCTCAACGCATTAACA
TGTGCGGCGATCTCAATCTCTTTGTCTTCGATAAGACGGGAACATTAACG
GAAGATCACTTGGAAGTCAAAGGTGTTTATCAAAAGGAAGATGAAGAGCT
GGTCAACGTGAGGAAAGGTGATCAAAATGAAAACAACCTTCTGATCAGAG
GTATGGTACTATTCTTGATCAAGTTCATTCTAACTAAACTAAAATTTGCT
ATGCTTGTTATCATTTCTCTAAAAATATTTGACACTGGAGTAGCCAGTAC
CTTCCCACAAACCAATTTTTAATTTCGCATAGCGAAAGTATTACGATCGT
CTTTCGCGGCGGCGGCGGTGCGGAAAAAAAATTAGAAAACGAAAGTAGTT
GAAACTTCTAGAACNAGACAACACAGACAGGTATGATCTTCATTTTTACA
AGTAGAATTATTTGTTGATATTTGATTGAGTTGTGTTGTAAGACAGATTA
TCATTTACTAAGTATTTCACAGAAGAATTTATAGCAGGGGGTGTCAATCT
ATAAGTGATAGAGAAGTTACTTTTCGCTAGCTAGAGTAGGTGCGATGGAT
GTGTTAATTGTCATTTTCCAGGCTCAATATCAATCGATGACTAATTCGGT
AACCAACCGATAGATTGGATTTAGATTGATTTCAATAATCGAGACTATTC
TAACTGATAATAGATTAGTTTTTTAATCGATTGGACTCATTGGCTGTCAA
TTGTGATCAATCGAACATCTTAAGAATAAATCGATGGAAAATGGATCACA
AATACAATTGATAGCCAATCAAGCTTCCCGTGAAAAAATATTGATTATCG
ATTCTGTCTATCATGTATCAATTATTGAAATCAAACGATATCATCCAATC
CATCGATTATTTATCGATTAGTCATCGATTGGAAAAAGTTACCTTGATTG
CTACGGTTGGCAAACAATATCATACTCCAGGATGCAAGTGAAATTTTCCA
ATCCGCGGACCTAGACGGGGGTTCGGTTATTATCAGTTATGGTTAGGGTT
AGGGTTGGAGCTCGAGAGTCACAATATAAGGCCGAAGGCCGGTAGGGTTG
GGAGCTTTCTTAGTTATGGTTTGTAAATTACACGCTATAAGTATTTATGA
ATGTCAGCTTTCAGCCGTGTCTCGTTGGCGCAANGGTTTGTAAATTACAC
GCTATAAGTATTTATGAATGTCAGCTTTCAGCCGTGTCTCGTTGGCGCAA
GCGGTTAAGCATTGGCATTGCAAACCAAGGTTGCTTGCATTCTTGCATTT
GGTTGTTCGAGCCAGGGTGGGAGACCTGTTTCACCGGTACGGGCAAATTT
CAGAAAAATACTTAGAAAACAGTTAGAAACACTTGGGAAGGATAGAAAAT
CAGGATAGAAGATAGGAAAGTAGAAAATAGGGGGAAAATAAGAGACGATG
CATCCTGAAGTATGATATCATTTGCCAACCGATTGCTAAGCAGGCGTCAA
AGTTTAGGATTCCCACTCACAGTGGTTCACTTGGAAAGTGTACGAACATT
CACCCGGTCAACCCAAATGGATGCGAGGGAAAACGGCAAGACTGTTGTTA
AAGTTTATATCAAAATCTTACTGTAAAATCTGTATCAACTTTGATTGAAT
ACTGTATATACAATGGATTTGAGTTTTGATTGATCAGATATATAACTCAA
AGACAAACTTTTTTATACAGTGCCAGACTCCCACTCAAAACAATTGATTT
ATTTTCTATCGATAACAAATTAATTGACTAGATATCGATAGGTTCTAGTA
CCGTAACTTGGTCTAATGTCGACATCCCTCTTCTAATTCCGACACCCTTC
TTTAGAGATAGGAATAATAGGAAGGTTGGGATCACTTATATAGACAAANN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGCTGCA
CACGAGAAGCTTTTTCGCGACATAGTGGCCCCCACTATAATCAAATACTT
TGCGAAATTTTCGACTCTGAGTCGTCTTGTTTTCTTTGCTTTATTTAAAA
CGCGATTTCTAGTACCTATATGAAATTATAAAATTATGAAATTAGAAATT
TCCATCTGAGTAGACTGGAGTCGTTTATAATGCGTGTAATACTAATAATA
CTAATACTAAAGTCTGTCCAGATATAATTGGCAGTGGAAACAGGAATGCC
TGTAACCTTTTATAGTCAAATATAATTATGGAATTTTTTTTGCTTGCTTT
AGAGAATCAAAAGCGCTATATTTGAATGTATTTTTGGTTGAAAAATTCGT
GATTTTTAGCGGTTAAATTTGCGATTGCAAAAATNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNAACAGAAAAGTCCTTCGGAAGATATGGGACCCGAAATACCCCTTAGTA
GCACTTTTCTGTGAAATATCAAATCTCCAACTTATTACTAAAAACGGGGT
AGTCCCGGGGGGGGTACTACCCTTGTCGACCGACGGGGGTGCTCCGCTGA
GGTTCGAAAAATGGACCCTACGTGGGACTCGAAATTTGCGTCTTTAATGA
CCTCATAGCCAAACTGTGTTTAGTGTTTTGGGAATTAGCAAAGCTCTTTA
ATGACTTAAAATAACAAAGGCAATATAAGTTCATGCTTATCTTTTCAATA
AAAACAATTGTACTGTGATTTAACTTCGTTTCGAAATAATCAATGATACC
AATAATACCAATGCACCAACACTTAACATAACCCCCGTTTTAAGTAATAA
GTTGGAGATTTGATATTTCCCCGATATTTCACAGAAAAGTGCTACTAAGG
GGTATTTCGGGTCCCATATCTTCCGAAGGACTTTTCTGTTTGCCTTGAAA
TTCAAAAAACTTCTTAACCTAAGATTGAAGTACCACTGGTGTAAAAATGA
ACGTTATAGCATAAGTAGAAAAAAAGCTCAATTTTTGCAATCGCAAATTT
AACCGCTAAAAATCACGAATTTTTCAACCAAAAATACATTCAAATATAGC
GCTTTTGATTCTCTAAAACAAGCAAAAAAAAATTCCATAATTATATTTGA
CTATAAAAGGTTACAGGCATTCTTGTTTCCACTGCCAATTGTATCTGGAC
AGACTTTAATACGGGATTTAGTTTGTATAAACTAAAATTGTTCCCTCCAA
TACTTTTTGCTTTATTTCTGCTATGTCTGAATTAGTCGTCTAGCTTGCTA
GACTACCATCTGAGGGGTTAGGAAACTCTCCAATCTCCTTTGAAGTCTCA
AAAGATTGAAGAGAGGAGGCTGTTCTAGTTCTTGCATACAGTACCCATAT
ATACCAGACAGAGCGCACACGCGCGGGCGATTAAAAACGATCGCACGGGA
TGCGGGTCAAAAAATTCCCGTGAGCAATCTCGTTATTTATCAAAAAGTGC
CTTTACTAGCCTATTTGTCTATAGAGAGAAATACGGAATGGCAATGACGG
TTTAAACTTAGATTTTACAAATGAGACTTGCAGTTGTTTCGCTTAATCAC
AGATTTTTGTTTTATGAATTTATCTTTGACTTTGTTTAACAGGAATGGCA
TGTTGTCACAGCTTGCACCATCAAGATGGACACGTCACTGGAAACCCTGT
GGATACTGGCATGTTCGACTTTTCCAAGTGGTCAATGAAGGAAACTTCTT
CCGAATCTGGTTTCTTGCAATCGATGGAATCGCCGTCTACAAATCAAACG
ATCACCATACTGAAAGAATTTCCTTTCGAATCTTCTCTTCAACGAATGAG
TGTTATTGTCAACGAAGAAAGCAAATCTGAAAGTCAACCACTAAGAGTTT
ATATGAAAGGCTCCCCTGAAATGATCTTATCGTTTTGTGTTTGTGGCGTG
GATGAAAGTATCTTCCAATTTTTGAAAGAAGAAACCGATTTAGGTCACCG
TGTTTTAGCAATGGCCACTAGAACTCTTTCATCAGATGCGGATGTTCGAT
CTCTATCGCGCGTCGAAATTGAATCGGGCCTTCATTTCTGTGGCCTAATT
GTGTTCGTCAACGCTGTCAAAGATGCGTCTGCTTCTTCCATAGCAACACT
CAAAGATGGTGGCGTTCGCAGTGTCATGGCAACAGGTGACCATCTCAATA
CGGCCGTTGCTGTAGCGCATGATGTAGAGATTTGTCGTCCAATGCAGCAA
GTATACCATTTGAAAATGGAGAAGGACAATTTGGTTTACAGCAAAGTAAA
ATGCGTCACATCACGCGAGTCATCTGAACAGCTCTCAGTAGCAAGCACAG
AATCAACCACTGTCTTCATCGAAAGAGATTCGCCGAAACTTTATCTTGAT
TATTGCTGTGCCCTTACAGGTTAGTAGACACAAAAGTAATAAAAAAATAC
TAATTTTTCAGATAAATATTATAGTTCAGGGTCTGCCCTGACGTAGGATT
TTTATTGATGAACTTAAGTTTTACCAATATGCTCAAAAATCAAAATTAAA
TGTACTGTTCTTGTACTAAGAAAAAATACTAAAATTGTACGGCCAAATAT
GACCAAATAAGACCAAGACCCGTAGCCATTTCATAAATTTGAAGAGGTTA
GGGGATCATTTGTTTACTTTCAGTTAATTCAATTCTTCATTCTTTATACC
AGCTACTCTCGGGTACCTAATAGCTGGGGGATTTGGAATAAGCGGGGGAT
TTGAAAAAATCTCAAAACTTAATAAGCGGGGGTGGGGAGAGTGGAATAAA
AATATTATATGTGGAAAATTTTCGAAAAGGAGGTTAGTACAGCAGAATTA
GGGCAAAACTTCCAAAACAATTTTCACAAAAATCAATGAGCGCAGGGGTT
GGAATAAGAATGTCCTGGGTCGAAAAATTAATTAGTTAAGATTAATTAAT
TTTAGTTAATTATTTAATTAAATTAATCTGTTTTTTTCATTTTTACCTTG
CAGTTTTATTCGCTATTCCTATTTAACAACACTATTACTTCAGGTGATGT
GTACAACGAGATTAAGAGAAACCACAAGGACCTCTTACCTAATGTTTTGT
TATCGACCTCAGTTTATGCCAGAATGTCACCGATGGACAAATCTATGCTA
ATGGAGGACTTGAAAGAGATAGGATACAGTGTCGGTATGTCAAAGCATTG
TTTAATATATTCTCGTTTCAGTCTGTACAACAAATTCTTGATATGCGTAA
GTCAAGATGACGTCATATTTTTTAACGGAAGCACCCAAAAAAGCCGGTTT
TTGACCTCTGTCTTTCTACTTTTAGTAACAGAGAGAGGTCAAATCCCGGC
CTTTTTAGGGTGTTTCCGCAAGAAAAATGACTTACGCATATCAAGAATTG
ATAGTATATGTTTTGTATTATGAATATTACTCATCTAGATACCTTTTCAA
ATGAAAGGTTGCAAGAAATTTATGGCGTTCAACAGCCTCATATTTTTAAT
ACGAAAATATGGAGGTGAAAGAAACCTGTGTAAATTAAGGTGCGATTTAT
TTTCAGGGATGTGTGGTGACGGTGCGAACGATTGTGGTGCTCTTCGAGCT
GCAAATGCCGGTGAGTAGCATTTGTAAGTTAGCAAAAGTACTGAAGTTGT
GGCCGACCATTTTGTAAGAAATTGTAGGAAAATTGTCTGAAGTGTTGTTG
CACTTAAACACACCAGAAAGTTTGAAATAGTGGAGTAAATAGAAAGAAGG
ATGGAAAAGGTGATTTGGGATGAGATTATCACGTGGAAATATTTAAAAAA
GAAATTCGAAAATGAAGATGAAAAACTAAAAAGCAAAAATCAACACCCGG
CAAATAATGGTATAAACACTTTCACTGTGAAATTTTTTTCAAATGTTAGT
TCCATCAAAAGATGTGGCTTTAGATGTATGGCCGGTTGACCTTAACCAGT
GATCAACTTTTAACTGTATTTTTTAATTTGCCAAATTTTTCTTTTTCATT
GTAAAGATGTTCTAAGATTAATGCTTCATTCACCAAAAGAATCTTCATCT
TCGAATTTCTTTCAAAACGTTTTAGTATATGATCATTTCCCACTCACGAT
TATATTTTGAAAATCACAATTTAATACAATCCTTTGTAATCTAATAGTTT
ATTTAAAAAAAAAAACTTTAACTTGATTCTTTAAAAGTTTTTAGTCGGGC
GAAGGATAAACTTAAAATATATTTGCTAATTTCCGTAAAAAGAGCTCGAT
ATAACACTTCTGTGTTTTTTTCGATAGGTATTGCACTGTCTGAAGCGGAA
GCATCAGTGGCGGCACCTTTCACCTCTAAAGTGTTCGACATCTCATGCGT
GCCACAACTGGTTCGTGAGGGGCGTGCTGCTCTCGTTACCTCCTTCAGTA
TCTTCAAATACATCGCTCTCTACAGCTTCATCCAATTCTTTGGAGTGTTG
ATCCTCTACAACTTTAAAACGTCTTACAGTGACTGGGGATTCTTCATGGC
TGATCTCATCCTTGCTTTCGCATTCGCTCTTGCCATCACTCGTAGTAAGA
CCAGCAGTGCTCTTGCTGAGAAAGGACCACCAGGACGTCTAAGCGAGATC
AAAACTATTGTCAACATTTTCGTCCAACTCATCGTCTTATTGGTTTTCCA
AATCTTGGCAGCCATATTTGCACGACGAGATGCCTTTTACCAATCGCCAG
AGAAAATGGGGGAAATCGATTTTGGTTTTTATTACGTCAGTTATGAAAGT
TATGCTGTTGTGTCCATGAATTTCTTCCAGTATATCTGGACTGTATTCCC
TTGTTACACCAGTGAACCTTATTTAGAACCTCTTTATAAGAATCGATGGT
TCATTGGCATATTTATTGTCAACTTAACACTGGTTGTCCTCTCTGTATTA
GCGCCGGCCGATTTCATCAGAACAATATTTGAATATCCAACCAAGATTTC
TCAAAATTTGTCGTTGATCATTATCGGTCTTGGATTGGCCAATTTGTTTG
TTTTGCTTGGTATTGACTGGTTGGTTCAGAAAATGCATTGTTTGAAATTG
TGTCTGGGCAAAATAAATGCTCTCTTGAAACGAAGGAAGAAAAAGGCTAA
CTACAAAATTGTTTTTAATCGGCTCTCACATGAGAACTGGATTGAGGATT
CCATAAAGAGCGAATGAATTGAGAAAGGAGCGTCTCGTATGACAGTAACA
TCCCGATAGCTTTTTCAATTACAAGCTATCAATTATTTTCCTGGTTTCAT
TATGTGGTCCTTTGCTCCGAAAAAGAATAATCTTTTCTACTAGATATTCA
GTGTTCCTACCAGTGTTCCTACCAGTGTTCATCTCTTTTGTAAGATGAGG
ATAATTTACTGGAAAGATATTTTTCTGGCCAACTGACCGACCGGCGACCC
ACTCAAAGAATAATAAAGAAACGAGGATCTCTTTGGTAGTAGTTTCAGTT
GTAGAGTTTACAGAAAATAACAGTTCTGTCAATTTGAGTAATGTTGAATT
CCGCAGCCCGCTGTCAAATTTGAAGCTCTACCGAGGTCGAATACCGCACC
GCATTGCGGAATTCGACAGTGGTATTTTTGTGGGAAAAAAAACAAAACAA
ATAACACAGCGCTGTCGAAATTAACGTTTCATCGTTGCTAAAAAATGACG
GAATTCGACAGCGGTAAGTTATCTCTAGTTTATCATACAAAAATAATTTT
ACAGTCGAAGAATGGATTGTCTAATTGGAGTCCGGTGAAAAATCACCTTT
TCCTTACACAGCTTTCCTTGGGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063529TCONS_00063529Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063529-proteinTCONS_00063529-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_392supercontigscaffold_392:50002..60124 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.45	12.32	7.4	6.65	2.09	1.69	1.9	2.18	1.32	1.81	1.73	0.84	7.5	7.34	3.7	4.58	7.15	7.46	10.61	5.94	2.82	2.42	12.44	12.63	6.54	5.98	5.4	7.63	5.76	7.04