TCONS_00063529-protein (polypeptide) - C. hemisphaerica

Overview


Name	TCONS_00063529-protein
Unique Name	TCONS_00063529-protein
Type	polypeptide
Organism	Clytia hemisphaerica (Jellyfish)
Sequence length	1136

Sequence

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>TCONS_00063529-protein ID=TCONS_00063529-protein|Name=TCONS_00063529-protein|organism=Clytia hemisphaerica|type=polypeptide|length=1136bp
FSSVDTQLNFMLFLHSVDEYEKMKVNEGTEDEFTAHGYHRNNLRTILFWL
LCIITGGIVWIVLRWYPEKRARFVNDPCSLSEAHCVTIYALDGQKYVEEV
KEVSVPLAEDQSTVHFESDILKDLKMRYFVHMFLRYRICCDDTVHEITGH
DQMLSKSKIDELASQGVSPTTTNFRKAIHGSNHIEVPVRSFFVYCAQEAA
NPFYVFQVFSFTLWFIEGYIYYPCVIILISLTSIVATAYQTLKQMQKLHK
MVGQPCNVQCLNNVGEQVTKCSIDLVPGDILLIPNDGMDMPCDSILLEGA
CVVNESSLTGESFPVSKKSFEMETDVTYHLEEHKLYTLQYGTHVLQARSS
GRYVRSLVVRTNFCTLKGRLIRRIIHPKALKFQAYREAFRFLGFLGFLGI
IGMIFSFVVLGRQGQITIGELVVNSLDVITIIVPPGLPACLSVGIIFALN
KLKAHDIFCIDSQRINMCGDLNLFVFDKTGTLTEDHLEVKGVYQKEDEEL
VNVRKGDQNENNLLIRGMACCHSLHHQDGHVTGNPVDTGMFDFSKWSMKE
TSSESGFLQSMESPSTNQTITILKEFPFESSLQRMSVIVNEESKSESQPL
RVYMKGSPEMILSFCVCGVDESIFQFLKEETDLGHRVLAMATRTLSSDAD
VRSLSRVEIESGLHFCGLIVFVNAVKDASASSIATLKDGGVRSVMATGDH
LNTAVAVAHDVEICRPMQQVYHLKMEKDNLVYSKVKCVTSRESSEQLSVA
STESTTVFIERDSPKLYLDYCCALTGDVYNEIKRNHKDLLPNVLLSTSVY
ARMSPMDKSMLMEDLKEIGYSVGMCGDGANDCGALRAANAGIALSEAEAS
VAAPFTSKVFDISCVPQLVREGRAALVTSFSIFKYIALYSFIQFFGVLIL
YNFKTSYSDWGFFMADLILAFAFALAITRSKTSSALAEKGPPGRLSEIKT
IVNIFVQLIVLLVFQILAAIFARRDAFYQSPEKMGEIDFGFYYVSYESYA
VVSMNFFQYIWTVFPCYTSEPYLEPLYKNRWFIGIFIVNLTLVVLSVLAP
ADFIRTIFEYPTKISQNLSLIIIGLGLANLFVLLGIDWLVQKMHCLKLCL
GKINALLKRRKKKANYKIVFNRLSHENWIEDSIKSE

Run BLAST on NCBI

Gene-mRNA-Prot

This polypeptide comes from the following gene feature:


Feature Name	Unique Name	Species	Type
XLOC_039824	XLOC_039824	Clytia hemisphaerica	gene

This polypeptide derives from the following transcript feature(s):


Feature Name	Unique Name	Species	Type
TCONS_00063529	TCONS_00063529	Clytia hemisphaerica	transcript

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR023299	ATPase_P-typ_cyto_domN
IPR006544	P-type_TPase_V
IPR001757	P_typ_ATPase
IPR018303	ATPase_P-typ_P_site
IPR023298	ATPase_P-typ_TM_dom
IPR023214	HAD-like_dom
IPR008250	ATPase_P-typ_transduc_dom_A

Vocabulary: **Molecular Function**
Term	Definition
GO:0000166	nucleotide binding
GO:0016887	ATPase activity

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0006812	cation transport

GO Annotation

GO Assignments

This polypeptide is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006812	cation transport
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0016887	ATPase activity
molecular_function	GO:0000166	nucleotide binding

InterPro

Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PRINTS	PR00119	CATATPASE	coord: 825..844 score: 52.86 coord: 475..489 score: 54.93 coord: 304..318 score: 57.05
None	No IPR available	PFAM	PF00122	E1-E2_ATPase	coord: 265..454 e-value: 1.3E-25 score: 89.9
None	No IPR available	GENE3D	2.70.150.10		coord: 155..375 e-value: 9.2E-24 score: 83.3
None	No IPR available	GENE3D	1.20.1110.10		coord: 693..1097 e-value: 1.5E-40 score: 138.8
None	No IPR available	PFAM	PF13246	Cation_ATPase	coord: 526..615 e-value: 5.9E-9 score: 35.8
IPR023299	P-type ATPase, cytoplasmic domain N	GENE3D	3.40.1110.10		coord: 417..673 e-value: 1.6E-33 score: 115.3
IPR023299	P-type ATPase, cytoplasmic domain N	SUPERFAMILY	81660	Metal cation-transporting ATPase, ATP-binding domain N	coord: 481..676
IPR006544	P-type ATPase, subfamily V	TIGRFAM	TIGR01657	TIGR01657	coord: 34..1072 e-value: 5.0E-266 score: 883.1
IPR006544	P-type ATPase, subfamily V	PFAM	PF12409	P5-ATPase	coord: 30..107 e-value: 7.9E-16 score: 58.2
IPR001757	P-type ATPase	TIGRFAM	TIGR01494	TIGR01494	coord: 795..912 e-value: 6.9E-27 score: 91.9
IPR018303	P-type ATPase, phosphorylation site	PROSITE	PS00154	ATPASE_E1_E2	coord: 477..483
IPR023298	P-type ATPase, transmembrane domain	SUPERFAMILY	81665	Calcium ATPase, transmembrane domain M	coord: 872..1092 coord: 163..257 coord: 371..469
IPR023214	HAD-like domain	SUPERFAMILY	56784	HAD-like	coord: 658..722 coord: 772..871
IPR008250	P-type ATPase, A domain	SUPERFAMILY	81653	Calcium ATPase, transduction domain A	coord: 266..373

Blast

[Close]

BLAST of TCONS_00063529-protein vs. Swiss-Prot (Human)
Match: AT133 (Probable cation-transporting ATPase 13A3 OS=Homo sapiens GN=ATP13A3 PE=1 SV=4)

HSP 1 Score: 612.453 bits (1578), Expect = 0.000e+0
Identity = 403/1207 (33.39%), Postives = 626/1207 (51.86%), Query Frame = 0

Query:   17 VDEYEKMKVNEGTEDEFTAHGYHRNNLRTILFWLLCIITGGIVWIVLRWYPEKRARFVNDPCSLSEAH--------------CVTIYALDGQKY-VEEVKEVSVPLAEDQSTVHFESDILKDL------------KMRYFVHMFLRYRICCDDTVHE---ITGHDQMLSKSKIDELASQGVSPTTTNFRKAIHGSNHIEVPVRSFFVYCAQEAANPFYVFQVFSFTLWFIEGYIYYPCVIILISLTSIVATAYQTLKQMQKLHKMVGQPCNVQC-LNNVGEQVTKC-SIDLVPGDILLIPNDGMDMPCDSILLEGACVVNESSLTGESFPVSKKSFEMET-------DVTYHLEEHKLYTLQYGTHVLQAR-SSGRYVRSLVVRTNFCTLKGRLIRRIIHPKALKFQAYREAFRFLGFLGFLGIIGMIFSFVVLGRQGQITIGELVVNSLDVITIIVPPGLPACLSVGIIFALNKLKAHDIFCIDSQRINMCGDLNLFVFDKTGTLTEDHLEVKGVYQKEDEELVNVRKGDQNE---NNLLIRGMACCHSLHHQDGHVTGNPVDTGMFDFSKWS---------------MKETSSESGFLQSMESPSTNQT-----------ITILKEFPFESSLQRMSVIVNEESKSESQPLRVYMKGSPEMILSFCVCGVDESIFQ-FLKEETDLGHRVLAMATRTLSSDA---DVRSLSRVEIESGLHFCGLIVFVNAVKDASASSIATLKDGGVRSVMATGDHLNTAVAVAHDVEICRPMQQVY--------HLKMEKDNLVYSKVKCVTSRESSEQLSVASTESTTVFIERDSPK--LYLDYCCALTGDVYNEIKRNHKDLLPNVLLSTSVYARMSPMDKSMLMEDLKEIGYSVGMCGDGANDCGALRAANAGIALSEAEASVAAPFTSKVFDISCVPQLVREGRAALVTSFSIFKYIALYSFIQFFGVLILYNFKTSYSDWGFFMADLILAFAFALAITRSKTSSALAEKGPPGRLSEIKTIVNIFVQLIVLLVFQILAAIFARRDAFYQ----SPEKMGEIDFGFYYVS---------------YESYAVVSMNFFQYIWTVFPCYTSEPYLEPLYKNRWFI--GIFI-VNLTLVVLSVLAPADFIRTIFEYPTKISQNLSLIIIGLGLANLFVLLGIDWLVQKMH--CLKLCLGKINALLKRRKKKANY 1116
            +D  E+  +N+G EDE   +GY+ +  +  +  L  I +GG + ++L W PE R +      ++ +                C  I  L  + Y V   K +S  L+   +    E+   ++             ++RYF H  ++Y    +DT+H    + G D+ +S + I E  S G++     +RK ++G N I V V S F    +E  NPFY+FQ+FS  LW  + Y YY   I+++S+ SIV++ Y   KQ   LH MV     V+  +  V E++ +  S DLVPGD+++IP +G  MPCD++L+ G C+VNES LTGES PV+K +    +       D  Y+ E HK +TL  GT V+Q R  +G  V+++VVRT F T KG+L+R I++PK   F+ YR+A+ FL  L  +  IG I++ ++     ++ +G +++ SLD+ITI VPP LPA ++ GI++A  +LK   IFCI  QRIN+CG LNL  FDKTGTLTED L++ G+ + E+   ++  +   NE    +  +  MA CHSL   +G ++G+P+D  MF+   W                M         L    +P+ NQ            I I+++FPF S+LQRMSV+       +   +  YMKG+PE I   C        FQ  L++ T  G RV+A+A R L S      V+++SR  IE+ + F GLI+  N +K  + + +  L    +R+VM TGD + TAV+VA D  +  P  +V           K+ K N  Y+      S       S    E+  V +  DS +      Y  A+ G  ++ I  + +DL+P ++L  +V+ARM+P  K+ L+E L+ + Y VGMCGDGANDCGAL+ A+ GI+LSE EASVA+PFTSK   ISCVP L+REGRAAL+TSF +FK++ALYS IQ+F V +LY+  ++  D+ F   DL +       ++ +     L  + PP  L     + ++  Q+I+ + FQ L   + ++  +Y+      +       GF+  S               YE+  V  ++ FQY+         +P+ +P YKN +F+   IF+ + +  ++L  +A  D +  I   P +    + +I+    L N FV + ++  V +    CL   LG      +++  KA Y
Sbjct:    1 MDREERKTINQGQEDEMEIYGYNLSRWKLAIVSLGVICSGGFLLLLLYWMPEWRVKATCVRAAIKDCEVVLLRTTDEFKMWFCAKIRVLSLETYPVSSPKSMSNKLSNGHAVCLIENPTEENRHRISKYSQTESQQIRYFTHHSVKY--FWNDTIHNFDFLKGLDEGVSCTSIYEKHSAGLTKGMHAYRKLLYGVNEIAVKVPSVFKLLIKEVLNPFYIFQLFSVILWSTDEYYYYALAIVVMSIVSIVSSLYSIRKQYVMLHDMVATHSTVRVSVCRVNEEIEEIFSTDLVPGDVMVIPLNGTIMPCDAVLINGTCIVNESMLTGESVPVTKTNLPNPSVDVKGIGDELYNPETHKRHTLFCGTTVIQTRFYTGELVKAIVVRTGFSTSKGQLVRSILYPKPTDFKLYRDAYLFLLCLVAVAGIGFIYT-IINSILNEVQVGVIIIESLDIITITVPPALPAAMTAGIVYAQRRLKKIGIFCISPQRINICGQLNLVCFDKTGTLTEDGLDLWGIQRVENARFLSPEENVCNEMLVKSQFVACMATCHSLTKIEGVLSGDPLDLKMFEAIGWILEEATEEETALHNRIMPTVVRPPKQLLPESTPAGNQEMELFELPATYEIGIVRQFPFSSALQRMSVVARVLGDRK---MDAYMKGAPEAIAGLCKPETVPVDFQNVLEDFTKQGFRVIALAHRKLESKLTWHKVQNISRDAIENNMDFMGLIIMQNKLKQETPAVLEDLHKANIRTVMVTGDSMLTAVSVARDCGMILPQDKVIIAEALPPKDGKVAKINWHYAD-----SLTQCSHPSAIDPEAIPVKLVHDSLEDLQMTRYHFAMNGKSFSVILEHFQDLVPKLMLHGTVFARMAPDQKTQLIEALQNVDYFVGMCGDGANDCGALKRAHGGISLSELEASVASPFTSKTPSISCVPNLIREGRAALITSFCVFKFMALYSIIQYFSVTLLYSILSNLGDFQFLFIDLAIILVVVFTMSLNPAWKELVAQRPPSGLISGALLFSVLSQIIICIGFQSLGFFWVKQQPWYEVWHPKSDACNTTGSGFWNSSHVDNETELDEHNIQNYENTTVFFISSFQYLIVAIAFSKGKPFRQPCYKNYFFVFSVIFLYIFILFIMLYPVASVDQVLQIVCVPYQWRVTMLIIV----LVNAFVSITVEESVDRWGKCCLPWALG-----CRKKTPKAKY 1187

The following BLAST results are available for this feature:

BLAST of TCONS_00063529-protein vs. Swiss-Prot (Human)

BLAST of TCONS_00063529-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 1


Match Name	E-value	Identity	Description
AT133	0.000e+0	33.39	Probable cation-transporting ATPase 13A3 OS=Homo s...	[more]

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TCONS_00063529-protein (polypeptide) - C. hemisphaerica