XLOC_039772 (gene) - C. hemisphaerica

Overview
NameXLOC_039772
Unique NameXLOC_039772
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_39:315243..317819+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039772 ID=XLOC_039772|Name=XLOC_039772|organism=Clytia hemisphaerica|type=gene|length=2577bp|location=Sequence derived from alignment at scaffold_39:315243..317819+ (Clytia hemisphaerica)
GTTTCAAATTCGACAAGAAATAGAAAGTCGTTTCAAATACAATGTGACGT
TGTTCCCATCAATAATGCAGGAGGATGATGGTcttgaaaagaaagaacaa
cAGGTCATCACTCAAAACAACACTAAGGTGGAGTACAGCAATGACTTTAC
AGTCACCAGTGAACAAATGGAAGAAAGATATCCTTCATTATTCCCAAAGA
GTAAGTTGAATTATTGTTGCGCCGTGATAACATGGCTTTTTTCAAGAATT
CACAGTGAACAGTTGCAATCTTTCAATAGCGAGTTTTAATGTATCTGTGT
CTTTCTCTGTGACGGAGAtggttagcttctgatttgtctagatcctgact
gactaAGGACGACATTTAACAAGCACTTTTagcgtcctcgattttgcgtg
tcagaactgcgggttattccaattCTCTTCAGTAGCTCagtcgtcctcaa
aagtgcaaacaCATAAGCTAACTAATAATTCGAGATGGACAGATGAAATG
TTTTCAACAACAATAGATACTTGACTTCAATCCTTCCAAATGGTCATGGT
CATTCTTTCTGTATTTTAAATGTATTTTAGTTTACTGCGTTTCAATCTCA
AATACAAGAATACATTCGCGAATCAAATAATTAATGctagtttttttctg
aagtaTGCTATCTATCCATCgattcgattttgatttttctgccTTAACTT
CGAAGAAAAAGCATCTGCTATTGCATTAAGTGTTAGGTTAAGTTCTTAAC
TATAAAAAGGAGATGAAACAATACAGTCGAGTATCTATATCTCTATAACT
CCGCATAATGATATTCCCACTGGGAGaaaattactttattttttgttaGC
CCAAATCTCCGTAACTTGAAACatcccagttggcacacaacgttgtttca
acgttcatctatcGTTATATGGACGGTGTGAacattaaatgaacgttgaa
agaacgttgtgtgcaagCTTGAACGCTAAACGTTGTCTTGAAGTTCAAGA
GTTTATACTTGAGTGTAAAATAATGAGCTATGATGGAGCTGGTTCCAATG
ATTCCAAAAAAATACAACCCGAACAAGTATACTGTAATAAAGAATTTATC
TgtctttaattttttcagaaGAGTACAGTCCAGTTCAACGCCGAAAATTC
TCAGCTGTTTTACCTAAAGACAAGAAAAAACGTGATAAAATCTTGAAGGA
AAAGATCGATGGTTACATAGACGCGTTCACAGTACATGGCTTGACACGTG
TTTTTAAAGCACCAAAACGTGAAGCCATATTATGGATGGTTGTGCTCTGT
TTGGGAATTTTCCTGACCACCATCGTATTGTATAAACTGTTAGCGAAATA
TTTCAAGTATGAGACTTATACTGAGATTAAGTCCGTTGTGACGGATAAGA
ACTATTTCCCGAGTCTTTCCATATGCGAATTAAAGATGTTACAGAGAAAT
TATTTCTCGTATTGCGGTCAATCAATGAGTCCTTTACGTGATGGGAAAAG
TTCGAAACAGCCTTGCGATCATGCAAAGATCCCGACGTCGGCACATAATG
CATCTATGATCGGGAATGGAACAAAATCGTGGTCAAACGGCTTGTTTGAT
GTATTGTATTGCTACACATGGGATTCTAAAGATTGTAACAGTTTATATCA
TTTCCGATCAAACCGGAATTTAAATCATTCGTGTATCACATGGAATTATC
AAGGAGATATGACTGATTTATACGGTCATGTCGAAATCGGTATCAAATTC
CACGCATGGGATGATAGAGAACcgaaaatttttgcttcaccGCATGATCC
AAATCTCATTGAAATCGATTTAACCAAAAAGGTTAATTTGGATGCACACA
AGCTTTATGAGATCAAACTTGTGAAAACGGAGGTTAAAAGGTTGCCAAAT
CCATACCCGTCCAACTGTTCCAGCCAACGAGTGATGGATATTCTTCCCGG
AGACTACAGTCGTCGAACCTGCATCGAATCATACAAGATGTTGAACGCTT
ACAAAGAGTGTGGTGACACTTTTGATTACGTGCGACCACATATTCCGGAA
AAAATAAAAGCTCAATACTCGAAGAATAGCAGCGTTAAAGAGACACGTGC
TTGTATCCGAAGGGCCGTTCAAAAGGAGCCGGAAAAGGGCAGGTGCCCCT
TTCCATGCCGAGAACTAGATCTTGGAATCAGTTCGTCTTATAATGAACGT
CATGGTCTAGCAAGCCAGTCAGGCCATGATGGCCCTCATGAATGGACCTA
TAACGTGGCGCTGCAGTTTCAACACGTAGATTACTATAAGATAATGGAGG
AGAAAGCATTGTACTCAGGGAATCAATTGACATGTGAAGTAGGAGGATTC
CTCGGTTTAGTTATGGGGGCTTCCATGCTTTCTTTTGTTGAGATTCTGGT
ATGTGGCGCATTGTATATGATgcgaaaaatgtataacaatgAACAAGAAG
ATGTTTAATAGCGATTTTTGTGATAGTTTTAGAGAGGATTACTCGAGTAA
ACTTCAAGCAGACGTGTTTCAAGATAAATTATGAAGACAAGCGATGATTC
CTTTCGTAGATTATAATTCGTTCGAAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00063459TCONS_00063459Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00063459-proteinTCONS_00063459-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_39supercontigscaffold_39:315243..317819 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
Sort Descending | Sort Ascending | Only Non-Zero Values | Tile/Chart | Reset | Show/Hide Values

min expression (0 tpm) - - (8.67 tpm) max expressionaGrOo_1GrOo_2FGOo_1FGOo_2EG_1EG_2P1_1P1_2P2_1P2_2P3_1P3_2PoPr_1PoPr_2St_1St_2GO_1GO_2PH_1PH_2BMF_1BMF_2MMF_1MMF_2M_1M_2GEC_1GEC_2GEN_1GEN_2
Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0	0	0	0	0	0	0.82	0.85	2.66	1.23	1.41	1.65	0.8	0.96	0.4	0.13	4.76	4.63	1.87	2.8	8.52	7.68	3.98	7.27	7.22	8.67	0.1	0.04	0	0