TCONS_00063459-protein (polypeptide) - C. hemisphaerica

Overview
NameTCONS_00063459-protein
Unique NameTCONS_00063459-protein
Typepolypeptide
OrganismClytia hemisphaerica (Jellyfish)
Sequence length512

Sequence
The following sequences are available for this feature:

polypeptide sequence

>TCONS_00063459-protein ID=TCONS_00063459-protein|Name=TCONS_00063459-protein|organism=Clytia hemisphaerica|type=polypeptide|length=512bp
FQIRQEIESRFKYNVTLFPSIMQEDDGLEKKEQQVITQNNTKVEYSNDFT
VTSEQMEERYPSLFPKKEYSPVQRRKFSAVLPKDKKKRDKILKEKIDGYI
DAFTVHGLTRVFKAPKREAILWMVVLCLGIFLTTIVLYKLLAKYFKYETY
TEIKSVVTDKNYFPSLSICELKMLQRNYFSYCGQSMSPLRDGKSSKQPCD
HAKIPTSAHNASMIGNGTKSWSNGLFDVLYCYTWDSKDCNSLYHFRSNRN
LNHSCITWNYQGDMTDLYGHVEIGIKFHAWDDREPKIFASPHDPNLIEID
LTKKVNLDAHKLYEIKLVKTEVKRLPNPYPSNCSSQRVMDILPGDYSRRT
CIESYKMLNAYKECGDTFDYVRPHIPEKIKAQYSKNSSVKETRACIRRAV
QKEPEKGRCPFPCRELDLGISSSYNERHGLASQSGHDGPHEWTYNVALQF
QHVDYYKIMEEKALYSGNQLTCEVGGFLGLVMGASMLSFVEILVCGALYM
MRKMYNNEQEDV
Run BLAST on NCBI
Gene-mRNA-Prot
This polypeptide comes from the following gene feature:
Feature NameUnique NameSpeciesType
XLOC_039772XLOC_039772Clytia hemisphaericagene
This polypeptide derives from the following transcript feature(s):
Feature NameUnique NameSpeciesType
TCONS_00063459TCONS_00063459Clytia hemisphaericatranscript
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001873ENaC
Vocabulary: Biological Process
TermDefinition
GO:0006814sodium ion transport
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0005272sodium channel activity
GO Annotation
GO Assignments
This polypeptide is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006814 sodium ion transport
cellular_component GO:0016020 membrane
molecular_function GO:0005272 sodium channel activity
InterPro
Analysis Name: InterPro Annotations of C. hemisphaerica v1.0
Date Performed: 2017-06-01
ZOOM
x 1
POSITION
0
50100150200250300350400450500Expect = 2.0E-34 / Score = 119.3Expect = 0.0019 / Score = 18.0SequencePF00858G3DSA:1.10.287.770G3DSA:1.10.287.770
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001873Epithelial sodium channelPFAMPF00858ASCcoord: 99..493
e-value: 2.0E-34
score: 119.3
NoneNo IPR availableGENE3D1.10.287.770coord: 104..264
e-value: 0.0019
score: 18.0
NoneNo IPR availableGENE3D1.10.287.770coord: 443..503
e-value: 5.7E-10
score: 38.5

Blast
The following BLAST results are available for this feature:
BLAST of TCONS_00063459-protein vs. Swiss-Prot (Human)
Analysis Date: 2018-01-31 (Blastp Clytia hemisphaerica v1.0 proteins vs SwissProt (Homo sapiens))
Total hits: 0
ZOOM
x 1
POSITION
0
50100150200250300350400450500Sequence
Match NameE-valueIdentityDescription
back to top