XLOC_039252 (gene) - C. hemisphaerica

Overview
NameXLOC_039252
Unique NameXLOC_039252
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_370:22926..26124-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039252 ID=XLOC_039252|Name=XLOC_039252|organism=Clytia hemisphaerica|type=gene|length=3199bp|location=Sequence derived from alignment at scaffold_370:22926..26124- (Clytia hemisphaerica)
CTTTGCTCTATTCTCTTTTTTTTATTATTATTATTTTTATTATTGTTATT
ATTTGATTTGATTTTTTTTGTTAAACCCACAACCTTTCTATAACTTATAA
GAACTTTTTGTCCAATCCCCCTACTCTGACCTATCTATTTACAACCCATG
CCAGTGAAATTCCCATGTGGTATTTGCAAAAAGCCAGTAGCTAAGAACCA
CCGTGCGATCCAGTGTGACAACTGCTCCTATTGGGTACACATTAAATGCA
ACAATACCACAGACAATGACTATACCAAACTCATATCATCAGATGAAACA
TGGTCATGCCTCAAATGCATCCAGACAGCAATACCATTTCTTCAGTCCTC
TGATGAAGAACTCAAGCTACTCACCCAAGGTAAGTCTGCTTCTGATCTTG
ACCTATTTGACCCTGATGTGAATATTAATGTCCAATTCTTTAAAGACATT
GATAAGGTCCTTGAAAATGAAGAGTTTAGTGACACTCAAATATCCTCTTT
TTATCGTACACTCAGTGAACTGAATGAACTCAACATAGACAACTCCCAAT
CTCTTTCTTTATTGCATTTGAACATTGCTTCTCTCAATTTACACCAGGAC
GAGCTTAGAACTCTTATCAAAAATTGTGATACAAAATTTAACTTTATAGG
AATTTCTGAAACTGGATTCTCAAAATCTACCCCCAAATCTATTAATCTTG
AGGATTACATACCACTGGACACCCCAACTAAATCAAAAAAGGGAGGCACT
CGTCTCTACATCAAAAATAACTTTCATTACATCCCCAGACCTGATTTAGA
ATTAATCAAAGACATGGAGCTTGAGTCTACAGCTGTTGAAGTAATAAATG
AAAACAAAAATTTCATTGTTATGGTCATCTACCGACATCCCAATATGGAT
ATTTCAGAATTCAATGTTTTGTACTCCAACCTCTTAGACAAAATCTCAAA
AGAAAATAAACAAGCCTTTATCATGGGTGATTTTAACATAGATCTACTAA
AACATGAATCCCATGAAGAAACAAGCAAATTTCTAAACTCTAACTTTTCT
AACTGCTTTAAACCTCTTATTTCTGGACCAACAAGAATCACTCCCCACAG
CAAAACACTTATCGACAACATTTTTACCAATAGTCTCAAAGAAGTTGTTC
AGGCTGGAAACTTGATTACCTCAATTTCGGACCATCTACCTCAGTATGCT
ATTCTTAACTGGAATGTCAAAACCAAACAAAATCAAAAAGCTAAAATCTT
TAAAAGAGATTTCAGAAAATTTGATCGAAACAATTTTTTTCATGAGTTCT
CAGTTATCTCTTGGGAAAACCTTTTTGCTGAAAAAACACCTGGTGAGAAA
CTCAACATCTTTATCAATCAAACAACCGAAGTAATTGACAGCCATGCACC
AATGAAATCTTTTAAAAACAAATATACAAAAGCTCGAAAACCTTGGATAA
CAGCAGGCATACTGAAGTCTATTAACACAAGAGATATCCTCCAAAAAAAA
TACTTTAGATCCAAAACACCTGCCTTAAAGCAAGAAAAACACAAGGCTTA
TAAAAAATACAAAAATCTTCTTCTGAAAATAATGAGACAAAGTAAAGCTG
AATATTACAAAAAATATTTCAATGACCATAAAACCAATTTGAAACTTGTC
TGGGGTGCCATCCATGAAGTGACCAACAGCAAATCTAAATCTGACTTGAG
TCCAAAACTTATCATCCAAAACCAAAAAAAATTATGCAAAAATGAAGAAA
TTGCTGAAGCTTTCAATGAGTACTATGGTTCTATTGCTGACAAGACCAAA
GCTGAAATTCCACCTACGGATAAAGTCTTCAATGACTATCTTGGTGCGCC
TAACCCTGATTCTGTGTTTTTTCACCCCACATCTCCTGATGTCATCAATA
AATTAATCAATGAACTCGACGAGAAAAAGGCAAACGGTCCATCGAGTATT
CCCACGTTTTTCCTAAAACTCATTAGTCCTAGGGCATCCATCATTCTTGC
TGACATCTTCAATGAATGCCTCCAGTCTGGAACTTATCCTGACTGTTTGA
AAAAAGCCTCTATCAAACCTCTGCACAAGAAAGCCTCTAAATTAGAGATC
GGTAACTACCGACCCATTTCTCTGTTATCCAATATCAACAAAATTTTTGA
GAAACTTATTCACTTCAGACTCTCTGAATTTTTTACCCAACACGACATTA
TCTTCAAAAACCAATTTGGATTCAGAGAGCGTCACAGCACAAACCATGCA
ATAATTGCTCTCACTGAACTAGCGAGAGAAGCCCTTGATAACAAAGAATT
TGCTGCAGGAATTTTTATTGATCTTAAAAAAGCGTTTGATACTGTGGAAC
ACAGTATCCTTCTTCACAAACTTCGTCACTATGGTGTCAGAGGCAAACCT
TTTGAATTAATTTCGTCCTATCTCAGTAATAGAACTCGTGGTACTTTCAT
CCAAAACACTCTCTCAAGTCAAATTGAACAAAAACATGGTGTCCCACAAG
GATCAGTGCTTGGTCCACTTTTCTTCATTATTTACATTAACGATTTGAAC
AAAGCTATAGATCACTGCTCAACTATACACTTTTCTGATGACACTAGCCT
GGNTTTTGAATCTCATATCAGCTACTTTATCCAATCTCTTGGTCATGTCA
AGGTTGCCTCATTAGACAAGCTGGAAAAACTCCAAAATAAGGCACTCAGG
ATTATCCATTTTAAAGGCCCTCAGGATTCTGCCAAGCCTTTATATGTAAA
TAGCAGAATCTTGCCCATTAGGTACATCATGAAAGAAAAAAACTGTCTAT
TTGCATATGATTTTCACAAAAACAGAGCCCCAAAGTACTTTTCCACCTTC
CTCTCTCCCATAGGTAATAATGCTCCCCATGTCACAAGAAACAAGCAACT
GTCAATCACCAGAACAAAGACGGTAATGTATGGATCGCACAACATAGCTA
ATCTTATCACCAAAGACTGGAATGAAATCCACCCCCATCTACCTTCCCTT
GACCAAATTACCAGCAAATCCACTTTCAAGGCCCACCTTCATGCTTACCT
TCTCACTAAACTTGCCTCAAGTTAAATCCCTTCCCTGACTCCCAAGGTTT
CTTTGTAGATGTATATATTATTATTTTTATTATCATTGTTATTATCACTA
TTACCTTTTTTTCCTTTGTTTCTTATTTTGAATTATTCCCCAATTATAT
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062636TCONS_00062636Clytia hemisphaericatranscript
TCONS_00062635TCONS_00062635Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062636-proteinTCONS_00062636-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_370supercontigscaffold_370:22926..26124 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.51	0.09	1.04	0.73	1.35	0.49	0.24	1.22	0.46	0.29	0.74	0.57	0.55	1.21	0.31	0.34	0.55	0.73	0.59	0.61	0.27	1.04	0.11	0.48	0.59	0.56	0.76	1.08	0.71	1.14