XLOC_039167 (gene) - C. hemisphaerica

Overview
NameXLOC_039167
Unique NameXLOC_039167
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_367:73997..77350+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039167 ID=XLOC_039167|Name=XLOC_039167|organism=Clytia hemisphaerica|type=gene|length=3354bp|location=Sequence derived from alignment at scaffold_367:73997..77350+ (Clytia hemisphaerica)
AAGAATGATTGAGAAATTAGTCTCAGTTCCTATTCCTATGCTGTAATCAA
TagagaaaatattgaatttgtaCGCGATAAAATAAAAAGGATTGATATAG
AAGAACCAACCAGCCAAGAGAACCAAACgaaaagaaaacctttttttcaC
TTAACAGTGTAAATGAACAAagcaaagaaataaaaatattagagGAAGAA
ATCGTTATAATAAAAATAGCAAATACGTGGAAAATATCATGAATCAggaa
ttcaatttttcttgaaacCTGCTATCGAAACGTTCTACTTCAAATAGATT
TTTATGTCGACGTAAAATGATGAAATCGATTTGATTGGTCATCAGAAGTT
GAACTAGACCGGAGTTAAACCATCAAGAATGGCCGAGCAACATTTGGAGG
AATATTTTTGATTGATTGGAAAATCAAAGAGTTTTTTATCTTgaataaaa
caaatttattgGGACGATTAAAATACATCTGGTATAAATTCAAAGAACCA
TATTTGACTGAAATCTTTCATTTGTACGTTTGAGAACTTTTGGTCGAGAA
CCCTTCGATTAaacgaaccaaatcgaacgcaatcgaaagTTAATTAACCA
ATCACACAATAAGAAAAACATAAGAGATTGCACTACACGTTAAAACacgg
tacacgctttttttttattttattttataagaatagtgtactttggttga
gggtaagcattattcttattttttattgttctaaacaataggcctattgt
tttaaacccgaaatctcaccctgatattcttatagaagttattcttataa
aaaaaaagcgtgtagtactTTTCAAACTCTTGTTGACATTACATTATTCC
CAACACTGTTTaattcatcaaaacaaacatggcgTTTATGGCTGGTAGTG
TTAAAAGTTTAATCGAGTTCAAGATTAAAACTCGCCACGATGGATACTCA
GATCAAGTCTCCCGAATCATGGTCACTAAACTTTTCATAGTGGCAAGTCT
TATAATGGGTGTTGACTGGTTCCACGATAACCTCTCATGTGTCCATCCAA
AAGATATCGATGTTGGAGGCGAGTATATAGAAAGTGCTTGTTGGATCAAA
GGATTTTACATATATAGAGAACATGAGCCACATCACCGGGAGTCCGGATA
TTACGGGATACCGAACTCGTTATCGATGGACGGGATGCGCCCCGCTTCCG
ATCGATTTGATGACGATGAATTTTGTAGCACTAAGGAAAGTAACAATAAC
AAACGGAAATATTATAAGACACAATCGACTTGTCAGAAAATGGATAAATA
TTATTTTGTTCACTACCAATGGATGCCCTTCTACATCTTCAGTATGTCGG
CTTTATTTTATATGCCGTATATTTTGTTCCGTATGGTCAATACTGATGTC
ATCAGTTTGAAGTTGAACATGAAAGACGACGAGgtgggtgtttttttttc
tcgtagGGGCTAGGCGAGATGGGTCCCGAGTATGTAGGATACGAGTTTTA
AAGACTGAAAATCGACGAAAATCGACGAAATATTTTTAGGTAAACTTTTG
CAAAGGGCCTCAAAAACGAAAAGAATCTTTCTCTTAAATAGTCGGTTTTT
GTTTATCACCCCGTTTTCTtgtaaacctagtaccccctggTCCGTAGTAT
GCGGCAACTATATTGGAAAAAGGCCGCGTCCGTACCTTCTGATTCCCACT
AGCTTCGTCTAATTCTGGTTTATATACAACTGCCATATTGTAAGGCTAAA
TGTAAATGTGCAAGTCACTGCAGTTTAAAAGCGACCTATTATTTTTGGGG
GTATTATTTTTGCGAGGTGATGGGAAGGTTTGAGCCAAAGTTCGAacatc
gaccctttgagagactgaatttcgaaaattttgccCTATTTTTGACGTTT
CTAccaccctttgagagactttttttcccaatttttattcaaaatttcaa
attttggtccAGACTATGAAATTTTATAACCCTTTGAGGGACATGATACT
GTTAATATTTCGTGGTTTTGTGACCCTTTCAGACTAATTTGCTATATTAT
AGTTTTATaccctttcagagacttttGAGGATGTAAAAAGGTGTCGGGTA
TGTGAACCCTTTTGGGTTCACATACCCGACAcctattttgcactccccct
TCCCGGGGATAGTGGCACTTGTCAGGTTTTAGGAATTTAAAATAACAGAT
CTCCCGAATTTTTAAAGAATCCGGCTTATTAAAATCCTAAATCTCAATCA
TCAGGTCACGTGTGACGATATCGTGgaattttatttcaatcatGACGTCA
ATCCCGTCTACAAAATGCGTTACCGCTTCTTCATGAATTTCGTGGTCAAA
GTCATTTACCTTATCACGAACATCTCTGCTTTTTACATCCTTGACGAGTT
ATTGGATTACCATTTCCAGTCATACGGTCTCGATTGGATTAATTGGTCTT
ACCAGAACACGACATTGCGTTATGACTACGAGAGGAGATTGGCGCCGACG
CCCGGTAATCGTATGTTACCTTCATTCGGTATGTGTGATCTTGTCATTTC
ACGCTTAGACGTCAAAGTCGATAGCGTTGATAAGATAACCGTTTTATGTG
AAATCTCATCCAATATTTTATACCAATATGTATTCGTGGCACTCTGGtat
gttttgattatttcgatcaGCGTGGCTGCCCTCGGAGTCATTGTCTATCT
TCAACAGCACATCCACGTCGcgtttttcatcaaaaacgAGCGTTCTTCAA
AATACGTGTATAGACTTTTAACATTCCGCGAATGTCAATATTTAGAATTT
ATCCGTAACCGTGATTTGACTATGTATGGTATTATCGTTAAAAAGTTACG
TCAAAAGCATTCATTACCGTTACCGAAACTACGTAAAATGGCGAACAAGG
AAGGAGGAGCGACGGCACCGATTTTACCGAATGGGAATACGGTGAAAGTG
AAACATCATTTGAAACATTTGGATTCTATGGAAGACGGAGATTCGTCGTA
AAGATCGTGTGTCACGTGTGTTGTTTAAACGGTTTGTGATGTGGTGTTTG
AATGTAGTCACGTGAGGAAGAATTATCTAAAGATTGGAGTTAGTGTTTGT
GTGGAAATGACAATGTTGAAAATATCTTgtgaaaggtttttttttaattg
ttaaaTGGGTCGTGGCAAATGATGGACGGGTGCGCTGTAGGCATTACGCG
TAAAGATTTTTGATCCGACAATTCAGTGAAATTGTCTACGTAAACTGGAA
TTTAAAACCTTATCAAAGCTGATTCAAACTATGCTTCAATTGGTGCAGCT
CCCATGACTCTTAGAAAGTAACTTTCTCTATCAGATAAGGATCCtaaatc
cggg
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062505TCONS_00062505Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062505-proteinTCONS_00062505-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_367supercontigscaffold_367:73997..77350 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.14	0.06	0.04	0.1	14.08	11.99	33.25	33.15	14.4	18.18	9.68	14.62	5.82	4.26	0.25	0.31	2.15	3.19	11.58	15.01	5.73	6.16	1.19	2.31	4.07	4.88	0.6	0.54	0.13	0.15