XLOC_039144 (gene) - C. hemisphaerica

Overview
NameXLOC_039144
Unique NameXLOC_039144
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_365:187249..190924+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039144 ID=XLOC_039144|Name=XLOC_039144|organism=Clytia hemisphaerica|type=gene|length=3676bp|location=Sequence derived from alignment at scaffold_365:187249..190924+ (Clytia hemisphaerica)
CCTGGACATAACTATTTgtccaccccctccccccatcTTCAGTGTTGATG
TGTAGTTGGTGGAACTTGCAAATTTCATCCCTCCAACATTNGCCGTACTT
TGGAAGCATCACAGCTGAAAAGATGGCAACCATCGTCGCAGACCATTTCG
ATACGGCATTTTTAAAGAGTTCCAACCCTATAACCCGCAGATTCCTTATG
GACAACTGCCCGCGACAGAAATCCAAGAAGGCAATGACAGCATACGAAAA
AGTCAAATCAATGGCATTCTGCATTCCACCGCGTTCACCNctgaaaattt
tgaaaaaaagacttaGTCGTGTGAGGGTTTCTGTTCAAGAGTGATGCTTA
CGCGGGACggtggtttgttttgattgagaaGGCTTGTTTCTTATGTATGT
TTTGattataattttgataattttggggTCTGGGGCTGAAATATTAGGTG
TGTTGTGGGTGAAAAAAGGCTTGGGATGAGGTATCTAACTTTGTTCTAAa
atgtttgtttatatttttctatttacagagaaaaagtataaaaatgaaaa
atttaaaaagaaagaataacAATGCAAGGGTCACACTGGTTCACTCTTGT
GAAATGAGGGCCCTTCATCAAAAGGCTGGTGCAANGTGTAATCAAAGTGA
TTCAAGGAAGAGGACGTCGTACAAAATACTAATGAAAAATACAGGTATTT
ATATACTATTTCAATATATAAAACTGTTTTCATTTATTCACTGCATGTTT
CAGGCTAGGAAACTGAAAAAATAATCTGACACGACCCAACTTTTTTTCAA
CATGACCCCAATTTTTGTGAACACGACCCAACCTTTTTTGTCTGAATTAG
GCCTGTATAGGCTGAAATCCAACACGACCCGACACGACCCAACTTTTTCT
ATTAAAGAATATAGACTATATTCTTTAATAGAAAAAGTTGGGTCGTGTCG
GGTCGTGTTGGATTTCCACTTTTACCattgtaaaataaaagaaaaaaatg
ggtcgcgtgaaaaaaatttgggtcgCATTGAAAAAAAGTTGGATTATATA
TGACTGGCAACATCTGAAACAACTCAAGTGGCTGGGATGGCATATATGAC
TtactcaaatttcaaaatttgttcaCGATTTAAAAATAATACCGCTTTTT
GAttatgaaaatctaaaaacgaTCAAAAGATTATGCGTGAAATTGACTGA
CTATGAAAACCTGATccaaaagataattttaaaagctaACTTCAACTCTA
AACACTGAAAAGGCAGGCTTAGcttcaaaacaatgaaaaagtcACTGTGA
AGTTTATAATCCAAAAATTATAATCCCAAAATTATATCGTGTTTCgcatt
ataaaaacaataacaaaaaagttaatgcAAAGTTATAATCTAAAAATTAT
ATCGTGTTTCGCatatcaaaacaataacaaaaaagttaaagcGAAGTTAT
AATCCAAAAATTATATCGTGTTTCGcatataaaaacaataacaaaaaagt
taaCGCAAAGTTATAATCCAAAAATTATATCGTGTTTcggtttaaaaaaa
tcaatacaAACAGTGTTTAAACGTTGTTTAAGAATCAAGTTCCTGACCTT
TGAAGATTAAATCCGCAAAGCAGCGAGGACAGGGTAAAACAATTCTGGGA
TTCTCAACTTTTTTGGTGAAAGTAAAGACTTGCCACCGTGTGTCCATCAT
GGCAGTCTCTCCAGGGTCTTTAGAGTTTCCTTTGCCGACATATTCAAACG
GTCGGATACTCGTAGAAAAAAAAGGTACGGAATTTGACCTTTCAATGGTG
AGGTCTGTTGCAAATGTATTTTTCGGGCGGGGTAAATTCACGGTGTCTCC
CTCCAATAAAAGTAAAAAGTCCTTCCAATCAATACACTCCGCAGACCATC
TGAAATCATTTAAAAGGGCAACTTCTTTGTCTTCCAAGCTAACCCACGCA
TATTTTGTGTTTGACGGGTTCGCAAACGCGTCGTAAACCAATTGCAAAGG
GGTGAGCAAGAACGACTTACCACAAGTTGATGGACCAACAATCAAAACAT
TGTTTCCCTTGCCCCTTCCATTTTTAAGCGCATTACGCATTGCAgcagca
aaaacataaacatttaCAGAATTTGACTGTAAGATGCTGACTGCACATCT
CAGCCACTCGTGTTGGATACAACTTTCAGCGCATGGCCCTTGAAAAGCAT
CATTTAGAATTTCCATGCGCGTTTTCTTTCTTCGCTCAAGAATTGCACCG
GCCTCTTCCATTTCCCATGTTGTCGCTATTAATTCGTTTACAAATTTTGT
GGAGTGACCTACAACCCACGCTTTAAGGTCTCGCTCACCATTCTTAGCGC
GTACATTAGCAATATGCAGAAGGACTGTTCTTGACCTTATGCCTTCCTTT
ACTATAAATTCAGATACCTCATAAGGCTTAAGCTTGTCTGGTGCAAAAAA
CTCCTCCTTCTCTTCTTCGCTGTCCTGTCCTGAGTCTGAAACCTCGAGCA
AATCGAATGAGTCTGAATGACTTGAATTACTTTCCCCCTGttctttttca
ctttcactAGTAGAATCATCAATAAACTTAAGTCTTTTCAATGCCTTTGA
CTTCTTTTTACTTCCTCCCTGCTTGCTGCTGCTGGCTGAGTTCTGACTGA
ACTTGCGCATAGCCTTTGAGGTTTTCGGGGTTCTAATCCGTGTCATCGGT
GAGTGACCTTCACTATGAAGTACCTCGTTACCAGGCTTGTTTTTAGAAAT
GTACCTGTAGGCCGCGACATAGCCTAAGCTCTTGATCTTGAAATGAATCG
acactttgaaagtttttaaaaaatatttctttacagGCGCAAATCGAAGA
GACCTGTTGAAGCTGATGGCCATGTGGAAGTGCTTACCACCTGTTGTGGG
ATGATCCTCGATACAGCAAGCCCACTCAACAATAAATCTTTCTCCAAAGG
CTTTGACGATTTGTTCGGAAAAACTTTCACGGGTTGGGAATGTACTCATG
TCTGCTTTGCTATACGTTATAAGAAACACCCTTCTCTGATCATTGACTTT
CGGTTTGCTAATTGGTTCATTCTCAGGTTTTGTCTTTTTAGGCTTGCCCA
TTCTTTTGTTtactgtttactttttatttctaatctgaaaaaggaaaaaa
acaaacaaactataCTTGTAAATATATGTGTGTATATGTGCTTATAAAAT
GTAAATAGACAATATTTTACATACTTTAGGGATGCTTATACCTTGTTCAG
ATTTATTAGGCACTtgtaatttgaaagaaaattctcCAGAGGCTTCTTGA
GGGATGCCGAGGGTCTTTTAACCAGGGAAAATTCaaaatcggggaaaatc
ggggaaaatcgggaaatcaggAAAATCGGGTTCGAATCCCGCGGAAATTG
CATTCTGGGATATTTTGAATTCGCACATGGCCTCGTGGAAACAACATGgc
tccttttcaaaaaaatttttttggttatGCATAGGGGAACCTCtgctcaa
atttttatttttttaagacaATCCTGGACATAACTATTTgtccaccccct
ccccccatcTTCAGTGTTGATGTGTAGTTGGTGGAACTTGCAAATTTCAT
CCCTCCAACATTGAAAGTGGGGGAGGGGGGGACTCAGCATGGGGAAATGA
GTAGTCGGACAGCAGTTATGTCCACG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062477TCONS_00062477Clytia hemisphaericatranscript
TCONS_00062478TCONS_00062478Clytia hemisphaericatranscript
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_365supercontigscaffold_365:187249..190924 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
11.16	9.76	19.63	22.31	78.79	58.65	9.2	10.05	5.34	9.84	11.09	9.12	5.8	6.18	7.32	8.9	7.72	7.43	4.99	3.99	8.01	7.28	6.77	7.81	18.34	29.72	3.25	2.69	2.62	1.94