XLOC_039094 (gene) - C. hemisphaerica

Overview
NameXLOC_039094
Unique NameXLOC_039094
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:312915..322101+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039094 ID=XLOC_039094|Name=XLOC_039094|organism=Clytia hemisphaerica|type=gene|length=9187bp|location=Sequence derived from alignment at scaffold_364:312915..322101+ (Clytia hemisphaerica)
AATAGCCTCACAATCAAATTAGTAATTACTAAAAACTGTATCACTATGTA GCATGCCAACAAACGTTTATTGTCATATAATGACGTGCTTAAAGAATTCA TTATCGAGAGATCTTTTTGTAGTGTTTTCTACCCTATGAACTTTCTTAAG AGAGAATTTTTATGAGCATGAGCGGGGGAAGTAGTGAAAAAAGTAAAAGG TTTCTAAATTCGAAACAGATTTTAATGACAATTTGTATTTATGGATATTT GACAGTTTCGAAGAGCCGGACGTAGAGAATCTTAAAAATGGTTACATTTa tgctgtttttgatgattgtTAAAGGTAAAATAGCTTTTGAAGATGTATTT CATCAATTCTACAACACTTATTAATGCGATCTAATAATCAAGAGGATATT GGTAATCGGATTCAATGAAACTTTGATTGGCATTATAGAATAAATCAAAC GTGGTCGAATTAAGATTCAATCAACCTGACATGGTTGAAAATTCGATTGG TATTCGAGCAATATCAATAATCCATCGGACAAGAGGATTCCCTTACAAAA ATCTAAGGGGTGCCTTTCCTTGGgactatttttttccaaaactgaTTATA AACCTATCTAGTGTCACTGTTTTCTTAAATGAgtttttaaaaagtgtttt tttgatATTTGCTTTCAGTTGgtgtattttgcagaccagCAATCAACAAG AGAAATTTCACAAGTGCATTTGATCAAATACAATGGAACAATGAACACAT CTTAAATTCTGAAGGTGCGTCTTTTCCTGATGGTTGAAAATCAACATGAA AAGCAAACGAACACAAAATTTGACCCCTGTTATCAGACAATGcgattttt ttatttacctttATAGCGTATTGATTTTGGCGGAGATTAAATTTGGtgaa tttggcggattttgctAAAATACACCAAATTAAATCCCAGCTAAATTATA CAAATTCtgctatccgccaaattaaatacccaCCAAAAATCACATTTTGG CCAACCAACAAATTAAGTACACaccaaaattaatacacttaagATAATCT AATCGAGTGGACTGTTTATTTCTACGTTGAATTACTGGAAATTACTTGAA TTACTTTGGAAGGCAGCTAAAGTTGGACTATTCTCCTTGGAAATACCTTC CCAACGGTGTATAGATTAATACATTAATAGGTGTCCTTTGTCTTATAGAT TCTGAAGACCTTTTCGAAGATGATATTGTCAAGTCTCCCGCAATCGATGA AATTATCAATCGCAAAATAACGTCACCAGGACGACAACGACGTGACGTCA TCACTGGACCATATGCATGGCCAAATGGGAAGGTTCCTTACGTATTTGCT GATGATTATCGTAAGTTTTGGTGTCGAGTTCAGACTTCATTATTTTTATC TCTTCCAGCCGAATTAGACGTGAATTCAAGAAActtaattaaaagtttat taaAGTTCTATGGTGAATTGAAGCTTTTTATGGCATTGGTTATGaataac aaaataagaacatacagtatgtggcccccaaaacggcgatcaaatttgaa gtttctctcaaatctagaggaaaagagattttacaaacatttttgctgca tgaaaacctttaacatctctactttatttcctggaagttctttttcaaaa ttttcaatttaacaatatttttcaatcgcttaaagataggtagctttttt ctaatggcccccaaaacggaggtttgaaattttagcgatttctcgagata tctttaagatatgaatacaaaattttgaccatagttttgaaatatgattt agagggttttgggcataaatttatttgataaaatttttacagtgNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNttatgaaatatttcaagatttttgatattgcaaagtccaaact gaaaatttagaaattttcaaaatgacaattttgatttaacaacgtcttaa tcaagtttttgagaacaaatctcttttgaaaatagttccatttatgtatg gaataagctgtgaaaattttagaaaaaaagcttaactcaaactgaaaata ttaagctttaaagatatttttctcctatattttgcaNaaacatgctcatt tttaagtatacccatcattctttcaaaataaacaaaaatcgtttaattct gataaatctacaagtcagaatcttcatttcaatgaaatcctccgttttgg gggccgtctccgttttgggggccgtatACTGTAAGGAACCGTATTCACCA CTTCTACCACTTTTGGGGTCGAGTTTATACTTTAATACTATTTACAAGAT AGGATTTCATATCAAGTTTTCCGGTTTCTTCCAGGATTCAGGCGATCCAA GTATCTTTCTTGCGCTCGATTCCCTGAGAAACTTTCCAGAGGATATTCAT TTTTCTGACACTCATTATTCATTCTATTCAGCCGAGTTCAGTAAATTTTG GGTGAGATCGTCCATGgatgaaattcaaaaagtcagtTGTGTTCAATTTA TTGAAAGAACTGACGAGAAAGATTACATCAAAATCGTCAACGGTACACAG TAAGTAAACACACAGTCTGATTTAATTGATGAATTTTGATAGCCCAAATG AgatcagtgaaatattttttattatNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNtccaaaa tactggttgaccttcaagatgctatatcttttacccagcctctaaagtca cagatgtatttgcattttctgaacggcattaggtgtagcaAGTTttctat accccgttttcataacttattttcaatatccaaggagctagagtgagtta tatgcaattttaatctaattttggtgctaaaatatttcctttagacgcaa atattNattttttgtcacttttattttgttgctattaaagagaGACAATA AAAGAGTTCAATTGTGAATTTCGTGAACAATTGAATGACTTTAAATCAAT AGGTTtacgttggttattggatttattaaccctcggtgataaatattcaa ctcggcttcgcctcgttgaatattacatcacctcgggttaataaatctca ataaccaacttttacctactgaatatctgcttattatgtCGTCACACCCC GTCACACGTTCATCTATGTCTCAGTCAAAGTTTAGggtcttttgaaagaa aagtagactggagtcgtttataaatTATAATCCGTCTAACACATTAATAT GGGTAACTATAATAATACGATCATTGTAACGGGATAATAccagatacctt atcggccctaaTTTATACCTTCCATtattttttgcctatttttcaaTTTG TCCGAGTTAGTCGTCTAAAATACTGGATTAAAAGAAaagcaaatattttt taaaataaaaccgATAAAACAATGTCTTTTTCTCCAGGTGTTATTCATCC ATTGGTCGACGTGGCTCGAACCAGACGTTATCTCTCGGAGACAATTGTCT TTCAGATTCGATTATTCAACACGAATTATTGCACGCCCTTGGTTTCTTTC ATGAACAATCGAGACTAGAAAGAGATTATTTTGTTACCGTGCACTGGGAT AATATTATCAAAGGTGAGAATGAGAATGTCAGGTTTGGAAAAAGTAATGT GTAAGGTATGAGCAAGCTTCCCATTGAACTTTCCATACAATTGATTTACA ACGCGCTTCTTCAAAACAACACCCTTTCTCAATCAAGTGAACAAAAGTTC GCAGAATTCCAATGAGTCAAACGGAGCAAATAAACGCAGTTTGTATACTT TAAGGTCCCAAATAGGGTccgaaatcttttcaaaatctaataaaCGAGGA GGTCGGAAATAGTTTCtctaaacccccccccctccaaaaaaaaaaaaaaa aaaaaaaaNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNaaaaaaaaaaaaaaaaaaaa aggtaattattATAAGCTCAAACCAGGTTTTTTAGAGCAATTCAGCTTGT GATagatgaaattattttcaaaaataaataaacagggGGGAGACGTTTCT TCGGGACCTTAAAGTGGTTATAATTTCAAGTCTCACTGGATCCGTTAATT TTCTGAGGaatctggtggctggtcagcaAGCAATCCCAGGATTACTTTAT TCcgtttattgcaatatgcaacAAGCAAGAGTTCATGATTCTGATGGTTT CAAGAATTGTATACTTTGATTTTTTAGGAAAAGAACACAATTTCGAGAAG TATGGGTTGGGTGAAGCATCACATTTAGATGAACACTACGACACAAAATC TCTCATGCATTACTCGAAGTAAGATAAACTAACGGAAAATTGCCAAATTA TTCTATTTTTACCAAATTATTGGAATACCTTTGTATGACTTATAATCATG ACCGAAAGTGAAACTATCAGAATCATTGAATATTGTCTTGACTTCATTGA CATCATTTATTGACGAgtaaagaataaagaaaaagtcaaacaaAGACATA ACTGATCTCTTTCTAATAAACCTAGGAGGTGTGGTTCTGtggttaaattt caaaaaatatgggAATTCTTTTTCAGTTACATCTTCGCGGTCAACGAAAG CAAAATGACGATCTCATCGAAATCCAACGCCTCAGAATCTCTCGGAGGAT TTGAAATGACCGACACGGACGTTCGACAATTGAACAAATTTTACAGCTGT CCATGTGCAGATCATATGTTCGGCTGTGAGTTTATTACAAGCATGTGTGG ACAGTTTAGGACTCAACAGTATTGTCAGAAAAGTTGTGGCTTCTGCCACA CTAGCGAGAATCCTCCAATGTCTTCAACGGTTTCCTCTTTAACCACAACC ATGTCAAATAATACAACAACGTCCTATACGACAGGAAGNCAGTATTGTCA GAAAAGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCCAATGTCTTCAA CGGTTTCCTCTTTAACCACAACTATGTCAAATAATACAACAACCTCCTAT ACGACAGGAAAAAGTCTCCCTACAACGAAAGTAATTCCTACGGCAACTAC GACCATCCAAACAAAGACGACAATAACTACCATTGTTTCTTCTACACGGG CCGTCATTACACAAACAACTTCTCCTGAGACAACAACGACCATATCTACT CCAACAACGGCCGTCCAATCGACTGCAACTGCCCTTCCAACGACGACATC GACTACCAGGGGAGTAGGAAACAATACATGTTTAGACATGAACCCATGTT GCACAGAGCTCGCAACACACGGGTTGTGCAACAAAAGTGAATATATCCGA TCAATATGTAACAAATCGTGCAACAAAGAATGCAGTGGTTCAAATTCAAC AGAACTTTTGGCCACAACACGATCGTCTTTCTTTGGAGACGAGCCACCAA CACCTTCAAAAGCAATAACACTGTTTGCACCATTCAGTAGCTCATTTCTT TCACTGTTGGTGAATGTACTTTGGAGATTTGGATACACGTGAGATCCGTA CGGAAAGATCTTTTGGTTAATGAACGATAGAGGAGTTAAGTTGACGCTCT TTAactcgattttcaagggaaatttgatttttaacggATAAGTAagcgta tcaaatagtagactagagtctacttctgactgaactttgctttctgatga ttttgcTGGCGCTGAGTCCAGTAAAGTAGACTGGAGAATACGgcaatctt gaattttttcattttgttttaaaaattataagttaactaaaatattaaaa ccccatcaaagtttatgagactataataaaaacatgaaaatacctcctaa atttgaaaaaagaaactggTCTATATTGGTCATGGTTTTCTGTTTGCTTT TCTttaaaaagggactggatctaaTGGCATGGATTTGCTACCATGTCGAG TCGGCCAATTAacaccgggccacttatcagtgCCATCCAGTCTATTAAAA AGCAATGTGGCCCGGGCtaatcgaatagtagagcgtcgtgaGGCTCTTGa ggacggtgactttcaatatttgaGAGCGTCAAGCGATTTCGTAGTTGATA GACATCAATGGTTATTGTCAAAGAAAAATGAACTTTGACCTGACTGACAT ATTTTTGAAcctttcaattattttgtttagacagttttgttaaaattttc aaataaaattttttagttATACATCGTTTCTATTCTTAAGAGTATCAGCA GATATTTAAAATCCAATTATATGCGAATTAATTTCATGTCTATTTAATTA GGTTGATTGAAAATCGATACTGGAGAAAATATTTGACTCAAAATATTGAT TCCAATGAAATGGGAAAAGTCACGCATTTCCCAACACCAACAAtgtaata caaaaaaaatatgcAACATGAATTTGCAGTCGAGAATTTTGCTCGATTAC TTTGTTTGAGCCAAACAAACAAGACATCGAGACAAATAAGAGTATAAAAG GCTACGAGTTGTGTTTGACTGCAACAGTTCTTTACAAACCAATTCAATAT GCTGAAGCTTTTGGTGACGCTTTCATTGGTGACATGCCTATGTAGGTAGA CTTCCAAAATTTATTCATTTCACTTGTATCTTGTATGAAAGCCGAAAGTT GATTCTATATTCCGACATTTAAAACGTTAGATTTAATATGATCCATAAAG GCTTTAGAGAAGCATGCGGCGTCTTAGTAGCAAATTATTTAAAAGTGAAT CTTCTGCCATTAAAAATTGCCATGTCAGTCTTTTGACTGTTTTTTTGGGA ATCTTTAGCCTGCGGtttcaaaattctttctttGTACTATATTTATGCTC ATCTCTTATGTAAAAAATGCTTCTTACATGACATTAGTACGAATCCCAAT TCCTTCACTTTGAATTTACAGGGGCATCCTGTTACGACAAAGACGGGGAA AGAAATTGTAAAAGCTGGAAAGACACCAGTAACTTTTGCAATCGACCAGA TGCTGATCAATATTGCGCNNNNNNAAAAAATATGGGAATTCTTTTTCAGT TACATCTTCGCGATCAACGAAAGCAAAATGACGATCTCATCGAAATCCAA CGCCTCAGAATCTCTCGGAGGATTTGAAATGACCGACACGGACGTTCGAC AATTGAACAAATTTTACAGCTGTCCATGTGCAGATCATATGTTCGGCTGT GAGTTTATTACAAGCATGTGTGGACAGTTTAGGACTCAACAGTATTGTCA GAAAAGTTGTGGCTTCTGCCACACTAGCGAGAATCCTCCAATGTCTTCAA CGGTTTCCTCTTTAACCACAACTATGTCAAATAATACAACAACCTCCTAT ACGACAGGAAAAAGTCTCCCTACAACGAAAGTAATTCCTACGGCAACTAC GACCATCCAAACAAAGACGACAATAACTACCATTGTTTCTTCTACACGGG CCGTCATTACACAAACAACTTCTCCTGAGACAACAACGACCATATCTACT CCAACAACGGCCGTCCAATCGACTGCAACTGCCCTTCCAACGACGACATC GACTACCAGGGGAGTAGGAAACAATACATGTTTAGACATAAACCCATGTT GCACAGACCTCGCAACACACGGGTTGTGCAACAAAAGTGAATATATCCGA TCAATATGTAACAAATCGTGCAACAAAGAATGCAGTGGTTCAAATTCAAC AGAACTTTTGGCCACAACACGATCGTCTTTCTTTGGAGACGAGCCACCAA CACCTTCAAAAGCAATAACACTGTTTGCACCATTCAGTAGCTCATTTCTT TCACTGTTGGTGAATGTACTTTGGAGATTTGGATACACGTGAGATCCGTA CGGAAAGATCTTTTGGTTAATGAACGATAGAGGAGTTAAGTTGACGCTCT TTAactcgattttcaagggaaatttgatttttaacggATAAGTAagcgta tcaaatagtagactagagtctacttctgactgaactttgctttctgatga ttttgcTGGCGCTGAGTCCAGTAAAGTAGACTGGAGA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062391TCONS_00062391Clytia hemisphaericatranscript
TCONS_00062392TCONS_00062392Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062392-proteinTCONS_00062392-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:312915..322101 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.34 0.31 0.3 0.35 0.17 0.07 0.1 0.24 0.12 0.09 0.03 0.18 26.55 31.76 16.53 16.02 4.57 12.93 0.11 0.27 0.08 0.06 0.33 0.27 0.22 0.1 0.53 1.16 0.23 0.39