XLOC_039089 (gene) - C. hemisphaerica

Overview
NameXLOC_039089
Unique NameXLOC_039089
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_364:170786..174218+

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039089 ID=XLOC_039089|Name=XLOC_039089|organism=Clytia hemisphaerica|type=gene|length=3433bp|location=Sequence derived from alignment at scaffold_364:170786..174218+ (Clytia hemisphaerica)
AAAAAGCAATATAAAACCACAAAGTTTCGATACTTTTGGCATTTGATTGC
AAGAAGGATAGCCAATAAAAGAACAATGGATAGGCGATCTCTTTCATTCG
ATCATTCTTGCTcggaaggagaagaagaagattgTTTCCAAGACGAAGAT
CCAAAAGCGAGATTTGAAAGGTTGGTCTAATTTATTTCCTAACCTccctg
gtacacaacgttgttgaACGTGCATCAAACGATATGGATGAAAGATAAGA
CCATGTTGTGTGTCAGCGTGATGAAACTTCATGTCGGGTCCAGTTTCAGA
AAGCGTTATagtaatgggccattccattaaatttccataccgGGGTTGGC
Aaaccttttcaagtaaaaaaaaaatttgaaaatgtgtggataccccctgg
aaaatggaaatatttgtaaaaagacccttggaaaatttcttttcatacct
taaagtgatgGTGGACGAATTGAAATCAGTCTATTATAACCCCCTAGAAT
TTTcgatatatttttattacccccttgaaaaatgaaaaagaaacactctt
taagaccccctggaaattctgctcgaattacccctggaaatgttcgtcca
cccccctatGGAATGGAATGTCAACACTTTATTTAGTGGTACTTCTCCAG
ACACTTTATATTTACCACTTCCTCGATTTGATAATCTATTTCTTGAGCAA
TAAGGTGCTATTTTCCCCTGTGATACCTAAATGTAActtattttagattt
taagaTCTAATGGATATCCGTCTTATAGTGAAGTAAATGAAGACGTCTCA
AAATTATGTATAATTCTCACAAATTTCAAGATTATGTCCTAAAATTGCTA
TGTAAAATCCGTTTTCCGTCCTAGACCAAAAACTACTGACCACTGTTGAT
AGttcctaaaaagaaattccttTGTGACTAACTTGATTACCTCTCTCTGT
AGTTTCCTGTATATTTTAGTATAAAACTAACATCCCAAATAAGActgctt
tttcatttttgagatagcattataaaattattatttgaCAGTAAAACAAA
ATTCGGTACAGTTTTGCATCCAAGAGATCTTAAGATATTTGAAGCATAGT
CATTAGCTGACACGGAGTTTTATTGTGTTAGTTTGATTCGGGGCCAAGTC
TGCTAAATACCCCCAAATTAACCAATCACATTCATTATATTCTCCCTTTT
TTTGAGTGCAAACCTCACTGTAAATAAACTAATCGCTAACGCGTGCCATC
TTTTCAGATATTTGAAATCATTCCAATCAAGCAAGATGATGGAAGATGGT
TACAATACGtttcaaatccaaaaagaagTTCGGAATATGAAGTTAGATTT
TGAGGACCAGATGAGACTGAAAACCGATCAGATCATGAAGATGGGAGACA
TCTTGAATAAAATACGGAACGAAAATGAAGAGACCAACTCAACTTTGAAG
AAACAGTTGAAAATGAAAGACGAGAGGCTAATCAAAGTGGAAGAAAGGTA
ATGTCTAGTCTATGGAACCTCAATATGGAATCTCTTGCactttaaaaccg
caagtgctttaaagtacggttagaaagtagagttttaacactctgagttt
taacatcaGACTTTCGACTTTCGACCTTAGGAtatcaggatctaaaagct
caaaaatgttccaaaataGCTGAGaacatagcctggaagccacttaaccc
ctcccaaagcGAAAATCCCCTGAAACAAAGTAGAAGTACTGAAATTGCGA
TTCTCACGCGAGCtttgaattctgaaaaatacacaaaattgccaatatat
ttcggcactGGTTGTAGCTTATAGCGTTGTTCTAACGTTCATTAAACGTT
ATGGTCCCAAGAACGTAGCGTGAACTATCTGGGAACATTCCGAGTAATCG
GTATAGTGATTAAATGTTTAACTCGGGTTGAGATGAAAACTTTCTTCGAA
ATCCCGatgaggatagaaattctattgttccaaacacGAAAAATCCAGTG
GAGATGAATGAATTTGAATGAACTTCCCAGTGAGGGTATTTCTCCCACAG
GGGAAGAAGTTTTGGCCAAGTTTTCCTGAAGGGCTGgtgtcccaccgggt
ctgtgacactgAGGTGTATCTTGACTTTATCATATCCTTTTCTTAGGNTG
AACTTCCCAGTGAGGGTATTTCTACCACCGGGGAAGAAGTTTTGGCCAAG
TTTTCCTGAAGGACTGgtgtcccaccgggtctgtgacactgAGGTGTATC
TTGATTTTTATCATATCCTTTTCTTAGACTCAGACTGAATGAAGAAGTTT
TGGTCAAAATGAGAAGAGACGCAGAAATCAAAGAAATCAGAATTACAGAA
CAACTAAAAACCAAAGATGAAAAACTGGCAAAGTTGGAACGAAAATTGAA
AGACACCAAGGAGAATCTCAATAAGTTTAAAGCAGAGAATGAAGCTGTTT
TGCACCGTTTGGAAAAATCAGTCGATGAAAAAAACACTCGGTTTAGTATA
CAAATGGAGGCAAAGGATGAAAAGATTGTCAAAATTGaagcaaaattgga
aaaaaatgaaagaagaacAAAGGAAAACGAAGAAGATTTGCTTCAATTGA
GGGATGAATGTGGAATCAAAGACCAGCAATTAGCTGTGCTTGACAGAGGT
TTGACAATGAGTAAAAAGATGGCTCAAAGTCTGTTAACCACACCTCAATG
TCCATTCACGTGGGAAATTACCGATTTTGTCAGCAAGTTTGATGATGCTA
GAGAATTCAATAATCGAATCCATTCACCCTCGTTCTTCTGTTTGGAAGGT
TATAAAGGAATGCTGAAAGTGTATTTGAATGGGAATGGAAACTATACTGG
AACACACATTACCGCAACTTTCGACCTCGTTCCAGGCCCTTTTGATGACA
TGCTTACCTGGCCAATGAGCTATGACCGTTTctctttcaaattttgcatC
AATGGTGCTGATATCGCATCACAGACTATCAAAAGGTCTGCAGGTGAGGG
CCGTTGGAAGGACGATTACACACGGCCCGAAGATGAGCAGAAAGGAAGTG
GCGGTTGGGGGACAACTATCAGCCACCGCAAATTGCCGAAAATCTTTGAA
GACGATACTATCACTTTCATATTTGAGATTGAGTAAAATTGTAATCAGCA
ACAATttaatatgaaatttttttctcgatcaGAAAGGAGGGAGAGAACGA
AGAGGAGCCGAGGAGCTAAGCTTTCTAGCTTTCCCTCTCAAATTAGATGA
ACGCTACCACAAGCAAGAATATTTTAGCTCATGCAAAATCGGAAACAATG
TGACTTATCCCTCAAAAATGCTATAAACAATTCTTTCAGGGAATAACTGT
CTTTAAATGAAAAGTTTTGAGCtgtaaatattatttttaattgtattttt
AAACAATCTTTTGGAAATGAATAAATGATTGTA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062378TCONS_00062378Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062378-proteinTCONS_00062378-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_364supercontigscaffold_364:170786..174218 +
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.29	0.33	0.59	0.81	0.07	0.06	0.34	0.22	0.35	0.41	0.34	0.35	45.66	27.93	7.11	20.2	1.75	6.44	0.14	0.17	0.13	0.07	0.33	0.33	0.14	0.2	0.14	0	0.15	0.09