XLOC_039077 (gene) - C. hemisphaerica

Overview
NameXLOC_039077
Unique NameXLOC_039077
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_363:109649..113237-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039077 ID=XLOC_039077|Name=XLOC_039077|organism=Clytia hemisphaerica|type=gene|length=3589bp|location=Sequence derived from alignment at scaffold_363:109649..113237- (Clytia hemisphaerica)
ATCCTTCCTAGGTAGCATCACCGAGTCCTTATGACTAGATGGCGTACCTC
ACGGACAATGGGAAAATAATAAATTCATCGAACAAAAGCCATCCCCACAG
CCAACAGTAAATATCTCTATTTCACTCAACTCATCTGCACATCAGAAACT
TTGTAAATCGTTTTCTTTGAATAAACTTCAACCTACCAAAGTTAGCGCCA
TCGCTGATACTGGCGCTCAAACATGTACAGCGGGAATAGAACTGCTTTCG
CAATTAAATTATAGTAAAAACGCTTTGATAAAAGCTCGACATCGTCTCCG
CGCTGTGAATAATAACGACATCAGTATTAAAGGCGCAATCATTGCTGACA
TCACCGTCGGCACATCGACCACCACAGAAATTGTTTACTTATGTGACAAA
GTTAAAGGATTTTTTCTATCAAAAACAGCACTGAAAAACTTGAACATCGT
ACACTCTACTTTCCCGGAGCAGATTGTAACCAGCCAATTGAATGCAACAG
ACTCACCAGACGACTCCGTTGCCGAGTGCGGATGCTCACGTCGTTCACCA
TGTCCACCCATACCTGACACGATTCCGTTCCCAGCGACACCAGAGTATAC
AGAACAATTAGAGGTTTGGATAAAAACGTACTTTTCGAGTAGTGCATTTA
ACACTTGCAAACATCAAAAGCTACAAGTGATGACAGGCGAACCGCTAAAA
ATCCAATTTCGTGAGGACGAAAATCCCGTTTCCGTTCATAAACCGATACC
AGTACCACATCACTGGAAAGAATCCGTCAAAGGCCAACTCGATCAAGATG
TAAACTTGGGGATAGTCGAACCAATCCCCACTGGGACACCTACAAACTGG
TGTTCTCGGATGATTACCGTTCCCAAGAAAGACGGCACACCCCGCCGAAC
AGTAGATTTGCAAAATTTAAACGCATCTACCAAACGAGAAACTCATTACA
GCCAATCACCCTTCAACATCGTAAGCGTAGTTCCACCGCAAACCAAAAAG
ACAACCCTCGACGCCTGGAACGGATACCACAGCGTTCCATTAGCCAACGA
CGCAAAGGAAGCAACGACATTCATCACCGAATGGGGCAGATACCGCTACC
TCCGTGCACCACAAGGATTCCATGGATCTGGAGACGGGTATACGAAACGC
TTTGACGATATAACAAATGACTTTCCCCGTGTCCAACGTTGTGTAGACGA
CTCGATCCTTTGGGACTCTGACATCGCAACAGCATTTTGGCACACAATGA
ACTACATTAAACTATGTGCCGACAACGGGATAGTGTTTAATCCCGAGAAA
TTTCAATTCGCGAAAGACACCGTTGAATTCGCTGGTTTTGTTATCACACC
ACACGGTTACAAACCAAACCAAAAGATCTTAGAAGGCATTAAAAACTTTC
CATCGCCAACCAACATCACCGGTGTTCGATCATGGTTCGGCTTAGTAAAC
CAAGTTTCCTACGCCTTCGCACAGGCACCCGTCATGACTCCGTTCAGAGA
ACTCTTGAAACATGATGGAAAATTCTATTGGGATGAGACGTTAGAGCGCG
TATTTCAAGAATCGAAACAAAAGATCCTCGACAGCATCGATGAAGGCGTT
CGCTCTTTCGAGATAAACCGACAAACCTGCATCACAACCGATTGGAGCAA
GACTGGTATCGGCTTCACCCTTCTCCAAAAACATTGTTCGTGTCCTTCAA
TTAAGCCAACGTGCGGAGAAAACCACTGGAAAACATGCTACGCTGGTTCT
CGCTTCACATCCCCCGCAGAGAGCGGATACGCACCCAGTCGAAGGCGAAG
CACTCGCTTTACTGTTCGCCTTACAATCCTGCCGAATGTTTGTAATGGGA
TGCCCTAACCTTATTATCGCCGTCGACCACGAGTCTCTGGTACCAATATT
TAACAAAAGAGAATTGTTCGAGCTAAAAAACCCAAGACTGTTAGACATCA
GAGAAAAGACTCTAATGTATAACTTCCAAGTAATCCACATCCCGGGCAAG
AAAAACGTAGGTGCAAACTTCATGTCCCGGATACCGCTTTCACCACCGTC
AAACACCTCTGATAAGATCGAGGCTGCTATCTCGGCTTCTATCCACCTCC
GTTTCAACCAAAGCAACTCGTGTTCCCTTGAGGACATCTCACGCAAAGCC
TCTGAAGACCCCGAGTACATAGATCTCCACCGTACAATTCTCGAGGGGTT
TCCAACCAACAAGGAAACTTTACCACAACACATCTTACCCTACTGGAAAT
TGAAAAATGACTTATATTGTGTAGACAATCTAATTATGCTTGACGATCGC
GTCCTGATACCACGCGCTCTTCGACGTACCCTACTAGAAGAGTTACACAT
CGGACACCAAGGCGTCAGCGCAATGAGAGAAAACGCAAAGAGACGATTCT
TTTGGCCACAAATGAGCTCACACATACAAAATCACAGGAATCAATGCACC
CGATGCAACCAAATCGCACCCTCAAATCGCAAAGATACACCGGAAGTCCC
CGATCCGCCGATTTATCCATTCCAACAGACTGTTGCTGACCTCTTTCACA
TGGCAGGACGCCTGTATATCGTTTATGCAGATCGCTTCTCCGGTTGGCCA
GAGGTCGCCTCAACCAAACCTGATGCTACAGCTACCACGGTTATTAACAT
TCTCCGAAGATATTTCACGAATTTTGGCGTCCCCGAAGAACTGTCATCAG
ACGGGGGTCCGCCATTCACATCTCACGAGTTCGAAAACTTTCTAAGATCT
TGGAACGTTTCACATCGAATATCATCTGTCGGCTACCCCCAAAGCAACGG
ACGAGCAGAAGCTGCAGTTAAGACTGTTAAACGGATATTAACGACCAATA
TTAGTCAATCTGGGTCACTGGACACCGATAATGTCGCCAAAGCCCTTCTC
CTGTACCGAAACACTCCATCACCAGACATGGGAGTCTCACCTTCTGAGCT
CCTATTTGGACGCAACATCAGAGACCATCTTCCAGCACCAAGACGTTTCC
GGAAAGAATGGATTGACCTAGCTGATATTCGCGAGAACACTTTTACTAGA
AGGCACCAACAAGCTTGCACGAAATCACAACGACACCTCCCTGATTTGAA
AGTTGGAGACACTGTTTCCATTCAGAACCAAACTGGTAACACTCCGCTTC
GATGGGAAAAGACCGGGGTAATCAGCGAAAGTTTACCCCATCGACAATAT
CGTGTTGTAGTCGATGGTAGCCGCCGTACGACACTACGTAATAGACAGTT
TTTACGCCCAATACCAAACGAAACACGCAACGATATCATCGATTTAGACA
TTCTACGACAAACAAAAGAAGAACATCTTCCCAAAACTAACGGGACAGAT
CTACCAGCACTCAATCAACCAGAAACAATTCCAACTGAACAAGAGACAAC
TCAGGCAGACACTTCACCCTCAATCGTCTGCCCTCCGACACCCGTCATCC
AAACAAGACGATCAACACGCACTAGAAGACCACCAGAGAGATTTAAAGAC
TACGTTATGAAATAGACATTTACACACGAAATTACTCGTGTCCATCATTT
AGTATATTTAGTTTTTGTTTAAAAAAAAAAAAAAAAAAA
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062363TCONS_00062363Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062363-proteinTCONS_00062363-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_363supercontigscaffold_363:109649..113237 -
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values : 
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
0.54	0.47	0.63	0.37	0.48	0.48	0.97	1.05	0.41	0.73	0.65	1.05	1.86	2.14	0.78	1.05	1.1	1.03	2.1	1.97	1.78	1.72	1.36	2.09	1.37	1.18	0.5	0.52	0.24	0.18