XLOC_039073 (gene) - C. hemisphaerica

Overview
NameXLOC_039073
Unique NameXLOC_039073
Typegene
OrganismClytia hemisphaerica (Jellyfish)

Sequence
The following sequences are available for this feature:

gene from alignment at scaffold_363:173153..183528-

Legend: gene
Hold the cursor over a type above to highlight its positions in the sequence below.
>XLOC_039073 ID=XLOC_039073|Name=XLOC_039073|organism=Clytia hemisphaerica|type=gene|length=10376bp|location=Sequence derived from alignment at scaffold_363:173153..183528- (Clytia hemisphaerica)
TTTTGTTTTTGGTAACAACAACAGGTTAATTTTACTTCTCAGTACTGAAA AAGAAGAAGATGATGACACTTGTTCAGACGATCTCAATCGAACGAAATCA ACGATCGAACCAGTCAAACCAAATCGAATGCAATCAACATATTGAAATTC GATTGTTGAACGCAATCGAATATCAATCGAACGTCAAAATTCTGGGTAAT ATTCGACTGGTGGTTCGAACGACCCACGGCATGGCCCGAACATGTTCGGG CCTCTTGATTAATACTTTTTTAAAAATGGCCCGCGCGTGGCCCGCGCGGG CCCGCGCAGTTTCGGACCATGTTCGGGCCAGATTTTCGAAAACTTGCTAC GATCGCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCAAATATAAAAGTTAAT CATCTATTTTCCAATTAAGTTAGGAAAATTATTAAAAAGAATGATTTGAA TCTTACATAATATGGTCTTCTTTATATTCTTTATCCCGTTCCCTTTTCTC GTGGTCTTTGTATATGTATCCCGTTTATATTATCCGATAGTTAACCCGAT TTGTATTTTATCTTAGTATGTTAGGTCAGAGAATAACATTCAGTTTTATC AACGAATATACAGTCTTCTCCTATTCGAAGCAGAATTTTTGTCTAATGAA AATATTTAACAATGGATGATGATAAACCAGGAAAGGTAAATAAAATTAAC ATGGCCCGAGCAAATCCGTATCAATTGTAAATACATGGCTCGAACATGGT CCGAACAAAAATACTTTTTTGTGGCCCGAGCATGGTCCGAACAGGCCCGA ACATGTTCGGGCCATGCCGTGGGTCGTTGGTTCGATCGTCGATTCCGTTC TCTCGATCGATTGAGATCGTCTGGCTTTATTCTTGCAGCTTCCCAACATC TAAGCTCTCAAACATCACAAGCCGAATGAAATTACTTTCGATTTCCCGTA GAAATTATGCGATGAACAATCCGGGGTCAATGAATCGGCGATCAAAAGCA ATCGAATGCAATCGAATCTCAATTGAATCTGAAAATTGCGTTCGATAATC GAATTACAATCCGTCAATTGCGTTCAATTTGGTTCGACTGGTTCGATCGT CGATTCCGTTNGTTATATTCGATTAAGATTTGATTGCGTTCGATAATCGA ATTACAATCCGTCAATTGTGTTCAATTTGGTTTGACTGGTTCGATCGTCG ATTCCGTTAGATTGAGATCGTCTGGACTTGTTAAGGCGATCATCGAAAAA TTGTTCTATTCGCGTCACCCGCCCGTATCAAATTTTCCTCTGATTTTCCG GTGCGGAGATGCAGAAAAAAAAGTGGGAAAAGCAATTTGTTCTTTTAAAG TATAGCTTTTTTCTCAATTGCTCTGACGACCATCGAAAAATTGTTTTGCT AGCGTTACCACCCGCCCCTGAGTTACTGGCGTGATTAAAGAAAAACCAGG AATGTTTTTGACCGCCCGTCCGCCCGCATGCATTTTTAACACCCGTTGTG ACGCGAACAGAGCTTTTTTTCGATGACCGCCTAAGGGGTCTTCGACAAAA AACTTTTGAAGTTTTTATCGGCATTGGGCCGATAAGCTTCAGACCCCCTC CCCCCCTTACTCTTATTGGCCAAAATTTTTCAAATCCAACTTTCACATCT TCGAAAACACAATTTCCTCCAATCTTGTCCGTCATCGCCTTCCCACCCGT CATCGTTGAATTTTTGTCTATTTGTGCACCAACATTGAGTTTGTTCATTA CCCGCATTGATATTGTTAATCAAAACAAAAGNCTGGGCCATGACCCTAGA CAGTTCTAGTTCACAAATTTTATAAGAACTGGAAGTGCGTGGTGAGTCTT AGGGGCCATCGTACATACCCGCATTGATATTGTTAATCAAAACGAAAGTT AAAATGACAGGATGAAGTCGCAACATTTCGAAGGAAAAGGCAGCGCTGGC CAATGAAAAAAGAGTTTTTTATCAAAGATAGTTCAAAACTGTACTTTTAA AGCTGCGAATTTGCGCGCAAAGGTGAAAGCAAGTGAAATCATATGCTTTC AGTGGAGTTTGTGGACGAAATCAGAAAGAAAGAAATTGGCTGAAAGGATT TTCGTCTCAATACTTGTTTTTTTATCAGTATGTAGTTGGACCCCCCCCCC ACCCCCTTATCGGCCCAATGCCGATAAAAAATTTGAAAGTTTTTTGTCGA AGAAGGAAGGAAAAGGCAGCGCTGGCCAATGAAAAAAGAGTTTTTTATCA AAGATAGTTCAAAACTGTACTTTTAAAGCTGCGAATTTGCGCGCAAAGGT GAAAGCAAGTGAAATCATATGCTTTCAGTGGAGTTTGTGGACGAAATCAG AATGAAATTGGCTGAAAGGATTTTCGTCTCAATACTTGTTTTTTTATCAG TATGTAGTTGGACCCCCCCACCCCCTTATCGGCCCAATGCCGATAAAAAA TTCGAAAGTTTTTTGTCGAAGATCCCTAAAGAAGGGGGTGCACAGGTGTT TGCCGCAAGCAAAAGTTGGTAATGCAAAGTCTCACAAAATTGCATTTAGC AAACGCAAAAAAAACTCCATAATGGCGGCATCATGCGAGAGAGCAATTAG AATACAAAATAAACTAATTTCAAAGGCTCATTGTAAGTGATTGAGTAAAG CTATCATCAAAAAATAAAAATAAAACAAATCTTTAACCTTTCAATAATCC AAATAAACAAAATATTTCAAATAAATTGATGTTTAAGTTTGAAAACAAGC ACCATTTCCACCATACACTTTTAGAGCAAAAAGCAGCATTTCGCTGAAAT CTGCTGCTCTTCCCGGGCAAATANNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTAAACGCGTTTACGGCAATGTTTATTCTTT ACACTTTCGTTTTCAAAATCTGTTGAACATGGATTTTGGCTTGTGACGAT TACCTCGCGTAACATCTGTGGGTGCCCAGTGCACGAACGGCAAACTTATT TTTCTCTTTTCTCACTTATATACTTTTGGTTTTTACATAAATCCTTTTCG ACCATCTCGTAACAAGCTTGAAGTCCTTCTTTCAGTTAGTCACACTATCC AGCTTTCAGAAAAAACAATATCAGTCATCTACAGGATGTATTTGAACAAC AAGAATGAGAGTTACCTGAATCAAGTTTGCAAGACAATTAAAATAAAACT TGAAAGTTTGAAACAAAATAAAACGTGCAGCAGCCAAAATCAACCAACCA AAATTTGGCCGTTCGCAAAAAATACCTTGGTTCCCGACATTCCAACCATC AAAAAGTGGGTCGGTCTGGTGGGCGAAAGATATTTTCTGTTTGAACGAAA CAGTTCAAGAGGGCGGAATTTTCCTTAGAAAAGGGTGATAAACGAACGTT TGATCGCCCTAGAAGCCTCTTTTTCACTTCACAAAAGCTCCGCTGGTTTG TTTTGATGCTTCCATATGGTCCGCAATGAAAAATCGGACTTGGAAATTGG GAAAAAACAGAACTAACAGGTTTCGAATTGTTCTTTTGGGCGAGATTAGC GTTTGCTCTTTCTCTCAAAAGAGAAAACATAGAGGGTGATGGTGGAGTTT CAGCTGTCAGGAAAAATGGTTTCCGACTCTAATTTTTCAGTAGAAATCAC GGTCGGTCAGGTGACGGGGAGCAAACAATTTTTTACGAACAGCCTTTGTC ATTCAATTCCCGAGACAGCTTGTTTATATGGTAAAGAAAAAACAATTCCG CACATGTAAATGGGTCAGTGTTTGATGTCCGGCAAAATTTCCGGTCAATA GCCTATCCGGCAGTGCGCAGATCTAGGTGGGTTCCGTCTCCCCGTAGATC TTTTTTCTTGGGAAGTTGATCTTCAAATTAGTTTTCAAGGTTGGCTTGGC TCAAATTTTTTCATCTATGGCTCAACTTTTAGGCAATTTCTCAATGTTTT TGAAAATGTTAATTTCATTAAAAAGTGCCGGGTTATTTTTTCATGAATCC CTTTAGAAGTTTTGCGGCGCTCTTTTTTGCTTGAGAGTCAGATAAACAAT ATAGCGCTTTCGCAGCATTAATCTTTGATATGCATTTTGGCGGGACGCTA GTGTGACTAACTGTCTTTCAGTTTGTTTTCACTTTATTTGAAGGCTTCTT CTTGGAATAATAATTCGTTAAAAAGCGAGCGCTATTCGGACCCAGTCCGC GAACGAGGAACCAGTGCGCGAACGATCTTTTGAAAGAAAAAATTAGAGCT TCGCTCGCAGGTAATACTTTAACTCTCTTCCGAGATGATACAGGGGTATT GAACTTTTCAAAACCACGCGTTTTTTCACTAAAAAAACGTCTTTTCGTCT TTTTTATAAGAGCTTTAGCGTTTTACTAACCTGTTATTTTTGTAAATATT TTCCTGTCGTTCATTTTTTTGTTTTCTTTTTCAAGTTTTGCTCATCGAAA AGCATACAGTAGTGTAGTGTCTTCTTTTTTAATTGAGATCGCCAGTGCTG TTGAATGTTTTGACGTTGCAATGTCTTCATTTTGAATATGGTGAAGTTCG GATCGTTCGCGGACTGGAACCTTTTTTATATCAACTACTGGTGATATTTT TCTTTTCTTTTTTAAAGTTTGTTTTTGTTTTGTTTTGAAAGTGGCAGTCT ATGGAGAGTCTTCATTTGATAAAAACGTGGGAATTTTTTATGTCTACCCG AAGATTCAATATACCGGTTTCCTTTGTTATTTCAATCCGGAGCTAGAAAC TTTGCATTGGAATTGTCAAGTTAAAGACCGCGGGCATGCCCCTTGAATGT TTTGATCGCAATGTAAAGTCTTCTTTTTTTTCTCAGCATCTGGAATGTTT TGATCGCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNTTTGGACAAGTATTTTTTGGAGTGGCAGTT CAAGCATTTTTTCTTACAAAGCTTTTTTGTCCACAGGTAGCCATTTTTTA TTTTTTTCGAAAAATCCAGCTTTTTCGTGTGCTTCCGTGCAAAGTTGGAT CTTTCAGATTCTACTCGTTTTTGTATGACTTTTCTGGGTTCAAAGACGTT CGGTTGCCAACTAGACCCGTCGCCAACTGGGCAGGGGACTCTATATGGCA ACCATCAATAATATATGAGGACCTTTCCGATGCTCCGGAAACGTCCGCAG CAAAATTTGCTGTTTTTTCGTGCTCTGGAACACCGCAAGATATCTTAGAT ATAATTACAATAGCGCTCGCTGTGCTGATCATGTGAAATAAAACTAACTG CGCATGCGCATATTTTTTAAAAATCAGCCGACTCATGGTACAGTAGTGAA ACCTCATGTTAACATGTTAAAAATCACTTGCTCTGGAAGCACCGGAAGAG CTCTGGAACTTTCCGGTGAGAAAAATAGTGTTTTTTTAGCTGAGCACCGG AAGGGTCCTAATATATGTTCTTTTTGTGCAGCCCAACCGACACTCACCTT TAAAACATAAATCTCGAGTCGGCCCAGCCGCAATAATCAGTGAAGCTGAT ACTTCGATATTCCAAGATTAGAAAAAGCTATATATACCTGTTAATTTTTT TTCTTTAAAGAATCAACAAGCCATCAACATCAATAAATTCCACACATTTC CTCATCAGAAACTTTTAAAATTATCTGCCATTATGACTTTCTGAAGCCAT TCCGAAATTAACCAATCGAGTTATGTATTGGAATTCCTATGGTAGTTCTT TTCCGATATATGTAAAATAGCTGCACAGGGGTTTGAGGAAAAAACAGAAC TACCATCATTTGTTTTTTTTTCAGCCATATATTTAAATTTATGCTATCAC ATGCTTGAAATAAATAAGTAAATAATATTAAATATACTATCTGTATATTT CAGANTTTTGGACAAGTATTTTTTGGAGTGGCAGTTCAAGCATTTTTTCT TACAAAGCTTTTTTGTCCACAGGTAGCCATTTTTTATTTTTTTCGAAAAA TCCAGCTTTTTCGTGTGCTTCCGTGCAAAGTTGGATCTTTCAGATTCTAC TCGTTTTTGTATGACTTTTCTGGGTTCAAAGACGTTCGGTTGCCAACTAG ACCCGTCGCCAACTGGGCAGGGGACTCTATATGGCAACCATCAATAATAT ATGAGGACCTTTCCGATGCTCCGGAAACGTCCGCAGCAAAATTTGCTGTT TTTTCGTGCTCTGGAACACCGCAAGATATCTTAGATATAATTACAATAGC GCTCGCTGTGCTGATCATGTGAAATAAAACTAACTGCGCATGCGCATATT TTTTAAAAATCAGCCGACTCATGGTACAGTAGTGAAACCTCATGTTAACA TGTTAAAAATCACTTGCTCTGGAAGCACCGGAAGAGCTCTGGAACTTTCC GGTGAGAAAAATAGTGTTTTTTTAGCTGAGCACCGGAAGGGTCCTAATAT ATGTTCTTTTTGTGCAGCCCAACCGACACTCACCTTTAAAACATAAATCT CGAGTCGGCCCAGCCGCAATAATCAGTGAAGCTGATACTTCGATATTCCA AGATTAGAAAAAGCTATATATACCTGTTAATTTTTTTTCTTTAAAGAATC AACAAGCCATCAACATCAATAAATTCCACACATTTCCTCATCAGAAACTT TTAAAATTATCTGCCATTATGACTTTCTGAAGCCATTCCGAAATTAACCA ATCGAGTTATGTATTGGAATTCCTATGGTAGTTCTTTTCCGATATATGTA AAATAGCTGCACAGGGGTTTGAGGAAAAAACAGAACTACCATCATTTGTT TTTTTTTCAGCCATATATTTAAATTTATGCTATCACATGCTTGAAATAAA TAAGTAAATAATATTAAATATACTATCTGTATATTTCAGAAAATAAACAC TATCAATTTGAAATAGTTTATCATTGTAACACCCGCCGTATTTGGATCAT TCTATTGTGGGCGCAAAATAAGGTGGAACTAAGTCGGGCTTCCTTGGTCT TTTTAAACATTAGTTCTGATAGAATAAAAATATAACCTGATCAACACAAC CAAACCTTCTGTCTTGCGTTTACTCTTTCTTTCCCAACAACTTTTGTTTT TGCTTATGTAGGTTTTAAAATCCACAAGTAATGAACCTCTTATAGTTTTA TCTGAATAAATCTTCTTGAAAACCTTCTGTCAGGTTTCATTCCGTATGTT TTTTATTCACATGGTGAACCAATTTCCTCGATTTCCTGATAATTGAAAAT TGGAACTTTCCNGTTCACATGGTGAACCAATTTCCCCGATTTCCTGATAA TTGAAAATTGGAACTTTCCCGTGGGCACGATTGGGCATACTGCCATTGCA AAATATTTTTCATGAAAATTTACGCTAATATAATCTTACATAGAATACAT CTCTTAAATTTGACTCTTTTGCTCGTATTTCTAAATTTATCGATGAAAAG AACTATCTATAAATTATTTGCTTAAACAGGCGTTGAATCGATATTGACAT ATTTAATGATGTCATAATCAATGCCGTGCATATTTTGTCAAATATCACTA AAATATACAAGATAAGTAAACATATAAATTTATTGCCTGCGAGCACGGCT TAGCGAAGCGCACCTCTCTTATTCATTATCTAAGAATTGAAGCAGGCAAA GATTACTGTGCAGGCTGATGGCGGACAAAGGTTATTTGAAGATATATTCA GTTATAATCCAAGGTAGAACAAACTAAACATGGAAAGGGGGTATTTTTCA GTGCTCTATGCGATGATCGGAATTTTTTTTGAATTCTATGTTTAGATTTT TCTACCCAGCCCCGTTGCTATGTACGCGTGTCCTGTTGCTAAGACCTTTG CTTGAAATCGAAAGCAAAACCAAAATAATTTAATCGATAAAGTGAAAGGA CTGACTGTAAGTATTCCCATGTTTCTTTATGGCTGGGGATTTGAATTCCA TTGTTTTCGAGCCAGAAAATCCAGTAGGGACTGGTAGGGATGGAAAAAGA GCACATATGACATTTAGAGGCTCCATCGGGGGTTTGTAAGGTACAAGGAC GAATTAATTTATGGTGCTTAATGGAGGGGGATGCTTATGGAGGAAATATT TGAGAGTCATTCACACAGATTCACATACTTTTGGGTTGTATTTCCATTGC TGTAATTTTTTTTTACTAAAATAACAACGCCCTTCTTTGTTCTTTAGATT TTATTAAAAGGCACTAAATAAGAATTAAACATGGCAGCTGAATCGGAAGA AATACCTGGTTTCGAATTTGAGGCGTATAACCCATTTGCAATTCGAAGTA ATTCTGCCTTAGTAGAATATTGTCGTGCATTTTTAGCATTTGTTTCTGGA TCAGCGGCTGGCATTCTTGGATTAACTGGATTGAATGGTTTTTTCTTTTA TATGATTGCGTCAATCTTTATGTCTGTATTGTTAGGACTGAAAACTCAGT CACAATGGGATCGATATTTCTTATCTAAATGGCATGTGTGGACAAATGGT ATTTTTGGTGAACTGTTTACTTATCTTTTAGTATGGACATTTATGTATGG TATTATTCATGTGTTTTGATTGGACGATATACAATTTTATCGAATTTATA GTTAATACCTTTGAAAATTGAATCATTCATATAACTTTTGGCTACATCAT TTAAAACATTCTTAGATTGGTTGGTACGAAAATCAGAATGAAAGTGAGAG AAAAAATTAGTTGCTTTTTTTAATTGCATGCATTTTTGTCGTTGCAGTGT GCAATATAAAACTAGTAACACTGGAGCTGAATTATCATGAGATATGTGAT AAGATTTATAATTTTTCAAAATATTTAGAATTTTAAGTTTTTGTAAATTA TTTTATTATATTTTACTACAACTTATTAGATGATCATGGGATAATAGACT CCAGTTGTAGTTGATCCATATTTAGTATTTGGAAAATACCTTTAGAAAAA GTTCTCATTTTCCCCCTGACATTAGGAAAAATCCCCTTGCCCCCTTGACT TCTGCCTTTTTTTGTTATTCTCCAAATCATAATTGTTTTTGGAATGGCTT AAGCCTATTACTCTCTGTGTATAAAATCATGGCTTAGTAAGCCAGAGTAA GCTTATCATTTAGGCGCACTCGTGACTTTAAATCCTATTTCTGCAGATTT CTGTACTTAATAAAAGAAATTTGAAAAGTGTGCCTTGAAAAATCAAGGTG TTAAGTGTGTATAAATGTGCCTCAGTCAATAATTTAATGATTATTATAAT AGACTATCGTGCGGAGTCATTAAATGTCTTTACTGCTGGAATGTGTTTAG TACTCACATATTTTAAATACTTTTAAGTGCCACCTTTTGGGCTGTCCTTT TGATGTAATCTCCTCACAAATTCCAG
Gene-mRNA-Prot
The following transcript feature(s) are a part of this gene:
Feature NameUnique NameSpeciesType
TCONS_00062359TCONS_00062359Clytia hemisphaericatranscript
TCONS_00062358TCONS_00062358Clytia hemisphaericatranscript
The following polypeptide feature(s) derives from this gene:
Feature NameUnique NameSpeciesType
TCONS_00062359-proteinTCONS_00062359-proteinClytia hemisphaericapolypeptide
Position
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
scaffold_363supercontigscaffold_363:173153..183528 -
Orthologs
The following orthologs are found for this feature:
Ortholog NameDescriptionOrganism
EMC6ER membrane protein complex subunit 6 Homo Sapiens
Expression

Hover the mouse over a column in the graph to view expression values in transcripts per million (tpm).
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Values :
    GrOo_1	 GrOo_2	 FGOo_1	 FGOo_2	 EG_1	 EG_2	 P1_1	 P1_2	 P2_1	 P2_2	 P3_1	 P3_2	 PoPr_1	 PoPr_2	 St_1	 St_2	 GO_1	 GO_2	 PH_1	 PH_2	 BMF_1	 BMF_2	 MMF_1	 MMF_2	 M_1	 M_2	 GEC_1	 GEC_2	 GEN_1	 GEN_2
98.12 93.22 49.52 38.29 42.5 22.54 32.35 31.09 30.06 25.37 20.51 18.32 13.97 9.93 17 17.05 22.04 21.9 8.68 10.57 32.46 32.83 90.17 78.94 10.25 15.74 31.3 23.41 52.79 50.05